RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 AARSP49588 968 aaKnown RBP eCLIP8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 VAV2P52735 878 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 ZNF132P52740 706 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 DEFB103AP81534 67 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 FMO1Q01740 532 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 ORC1Q13415 861 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 ARHGAP29Q52LW3 1261 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 SGO2Q562F6 1265 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 WSCD1Q658N2 575 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 ACAD10Q6JQN1 1059 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 PPP1R2P3Q6NXS1 205 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 PSRC1Q6PGN9 363 aaPredicted RBP8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 H2AFVQ71UI9 128 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 C16orf59Q7L2K0 433 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 REXO1L1PQ8IX06 675 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 THEM5Q8N1Q8 247 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 SLC4A11Q8NBS3 891 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 TMEM35BQ8NCS4 154 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 C3orf58Q8NDZ4 430 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 WHAMMQ8TF30 809 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 HASPINQ8TF76 798 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 DDX1Q92499 740 aaKnown RBP8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 TNIP3Q96KP6 325 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 PPP1R13BQ96KQ4 1090 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 SUSD3Q96L08 255 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 YME1L1Q96TA2 773 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 SYT11Q9BT88 431 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 TSGA10Q9BZW7 698 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 MTIF3Q9H2K0 278 aaKnown RBP8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 LZTFL1Q9NQ48 299 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 DNAJB4Q9UDY4 337 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 STXBP5LQ9Y2K9 1186 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 CEP83Q9Y592 693 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 NR2E3Q9Y5X4 410 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 SZT2Q5T011 3432 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 CARNS1A5YM72 827 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 I3L4J1 428 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 M0QZQ0 153 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 ZNF263O14978 683 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 GPR37O15354 613 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 ZNF500O60304 480 aaPredicted RBP8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 KIF4AO95239 1232 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 FTLP02792 175 aaPredicted RBP8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 CYP11A1P05108 521 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 GALTP07902 379 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 TYMPP19971 482 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 IGFBP6P24592 240 aaPredicted RBP8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 PCSK1P29120 753 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 SSTR3P32745 418 aaPredicted RBP8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 SLC11A1P49279 550 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 ALDH7A1P49419 539 aaKnown RBP8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 NAP1L1P55209 391 aaKnown RBP8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 BCAR1P56945 870 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 ELAVL2Q12926 359 aaKnown RBP8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 BTG3Q14201 252 aaPredicted RBP8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 STILQ15468 1287 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 PTPN14Q15678 1187 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 CNGA2Q16280 664 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 CLEC16AQ2KHT3 1053 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 TMEM240Q5SV17 173 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 CD300LGQ6UXG3 332 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 ZNF662Q6ZS27 426 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 LIMS2Q7Z4I7 341 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 ACOT1Q86TX2 421 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 OSTM1Q86WC4 334 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 PASD1Q8IV76 773 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 CMTR2Q8IYT2 770 aaKnown RBP8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 CRYBG2Q8N1P7 616 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 SPATA18Q8TC71 538 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 KBTBD7Q8WVZ9 684 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 TFAP2BQ92481 460 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 ZNF689Q96CS4 500 aaPredicted RBP8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 CYFIP2Q96F07 1278 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 TWNKQ96RR1 684 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 PCDHB18PQ96TA0 734 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 ZNF518BQ9C0D4 1074 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 DDX43Q9NXZ2 648 aaKnown RBP8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 HESX1Q9UBX0 185 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 HMGXB4Q9UGU5 601 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 ADAM28Q9UKQ2 775 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 INTUQ9ULD6 942 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 PCDHGC3Q9UN70 934 aa8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 REXO2Q9Y3B8 237 aaKnown RBP8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 TIMM13Q9Y5L4 95 aaPredicted RBP8.03□□□□□ -1.12
APOBEC3A-203ENST00000488758 ANKRD62A6NC57 917 aa8.02□□□□□ -1.13
APOBEC3A-203ENST00000488758 USP27XA6NNY8 438 aa8.02□□□□□ -1.13
APOBEC3A-203ENST00000488758 NT5C1B-RDH14C9J2C7 533 aa8.02□□□□□ -1.13
APOBEC3A-203ENST00000488758 SOX1O00570 391 aaPredicted RBP8.02□□□□□ -1.13
APOBEC3A-203ENST00000488758 GABRDO14764 452 aa8.02□□□□□ -1.13
APOBEC3A-203ENST00000488758 SYN3O14994 580 aa8.02□□□□□ -1.13
APOBEC3A-203ENST00000488758 PJA2O43164 708 aa8.02□□□□□ -1.13
APOBEC3A-203ENST00000488758 KIF5CO60282 957 aa8.02□□□□□ -1.13
APOBEC3A-203ENST00000488758 B4GALT3O60512 393 aa8.02□□□□□ -1.13
APOBEC3A-203ENST00000488758 MICAL2O94851 1124 aa8.02□□□□□ -1.13
APOBEC3A-203ENST00000488758 LSM8O95777 96 aaKnown RBP8.02□□□□□ -1.13
APOBEC3A-203ENST00000488758 TUBB4AP04350 444 aa8.02□□□□□ -1.13
APOBEC3A-203ENST00000488758 CYP1A1P04798 512 aaPredicted RBP8.02□□□□□ -1.13
APOBEC3A-203ENST00000488758 ITGB1P05556 798 aa8.02□□□□□ -1.13
APOBEC3A-203ENST00000488758 UNGP13051 313 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms