RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 SCINQ9Y6U3 715 aa21.41■■□□□ 1.02
NECAB3-213ENST00000488489 FGGP02679 453 aa21.41■■□□□ 1.02
NECAB3-213ENST00000488489 CKBP12277 381 aa21.41■■□□□ 1.02
NECAB3-213ENST00000488489 ACTN2P35609 894 aa21.41■■□□□ 1.02
NECAB3-213ENST00000488489 GPD2P43304 727 aa21.41■■□□□ 1.02
NECAB3-213ENST00000488489 LILRA4P59901 499 aa21.41■■□□□ 1.02
NECAB3-213ENST00000488489 ACOT1Q86TX2 421 aa21.41■■□□□ 1.02
NECAB3-213ENST00000488489 FEZF2Q8TBJ5 459 aa21.41■■□□□ 1.02
NECAB3-213ENST00000488489 KBTBD7Q8WVZ9 684 aa21.41■■□□□ 1.02
NECAB3-213ENST00000488489 CPXM1Q96SM3 734 aa21.41■■□□□ 1.02
NECAB3-213ENST00000488489 MED4Q9NPJ6 270 aa21.41■■□□□ 1.02
NECAB3-213ENST00000488489 GDAP2Q9NXN4 497 aa21.41■■□□□ 1.02
NECAB3-213ENST00000488489 CWC15Q9P013 229 aaKnown RBP21.41■■□□□ 1.02
NECAB3-213ENST00000488489 NR2E1Q9Y466 385 aa21.41■■□□□ 1.02
NECAB3-213ENST00000488489 TARSL2A2RTX5 802 aaKnown RBP21.4■■□□□ 1.02
NECAB3-213ENST00000488489 ARL5CA6NH57 179 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 PROSCO94903 275 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 FGFR1P11362 822 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 CTNNA2P26232 953 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 LRPAP1P30533 357 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 TAF6P49848 677 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 SLC7A5Q01650 507 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 HSP90B2PQ58FF3 399 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 TRAF7Q6Q0C0 670 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 MRPL10Q7Z7H8 261 aaKnown RBP21.4■■□□□ 1.02
NECAB3-213ENST00000488489 UBA3Q8TBC4 463 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 LPIN3Q9BQK8 851 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 TMEM191CA6NGB0 347 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 M0QYV0 167 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 MBTPS1Q14703 1052 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 PPP1R15BQ5SWA1 713 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 LIMS2Q7Z4I7 341 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 OR6B3Q8NGW1 331 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 ZNF560Q96MR9 790 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 KRT12Q99456 494 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 TRAIPQ9BWF2 469 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.4■■□□□ 1.021e-6■■□□□ 11.7
NECAB3-213ENST00000488489 DPEP3Q9H4B8 488 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 TSPAN16Q9UKR8 245 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 KIAA1257Q9ULG3 409 aa21.4■■□□□ 1.02
NECAB3-213ENST00000488489 ZNF623O75123 536 aa21.39■■□□□ 1.01
NECAB3-213ENST00000488489 PYGMP11217 842 aa21.39■■□□□ 1.01
NECAB3-213ENST00000488489 PNPLA4P41247 253 aa21.39■■□□□ 1.01
NECAB3-213ENST00000488489 MAP9Q49MG5 647 aa21.39■■□□□ 1.01
NECAB3-213ENST00000488489 PPP1R26Q5T8A7 1209 aaPredicted RBP21.39■■□□□ 1.01
NECAB3-213ENST00000488489 LCLAT1Q6UWP7 414 aa21.39■■□□□ 1.01
NECAB3-213ENST00000488489 ADAM2Q99965 735 aa21.39■■□□□ 1.01
NECAB3-213ENST00000488489 UNC93B1Q9H1C4 597 aa21.39■■□□□ 1.01
NECAB3-213ENST00000488489 A0A0U1RQF3 1178 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 KRIT1O00522 736 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 MYCP01106 439 aaPredicted RBP21.38■■□□□ 1.01
NECAB3-213ENST00000488489 LMO2P25791 158 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 ZNF252P-AS1Q0IIN9 211 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 DNAJC24Q6P3W2 148 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 HACE1Q8IYU2 909 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 MCEEQ96PE7 176 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 TSPYL2Q9H2G4 693 aaPredicted RBP21.38■■□□□ 1.01
NECAB3-213ENST00000488489 GIT1Q9Y2X7 761 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 ERBB2P04626 1255 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 PFKMP08237 780 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 IBSPP21815 317 aaPredicted RBP21.38■■□□□ 1.01
NECAB3-213ENST00000488489 SLC1A1P43005 524 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 AARSP49588 968 aaKnown RBP eCLIP21.38■■□□□ 1.013e-7■■■■■ 29.5
NECAB3-213ENST00000488489 SCNN1GP51170 649 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 OGDHQ02218 1023 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 C8orf74Q6P047 294 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 KLHL7Q8IXQ5 586 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 C3orf20Q8ND61 904 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 TSPYL1Q9H0U9 437 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 FAM49BQ9NUQ9 324 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 PHF24Q9UPV7 400 aa21.38■■□□□ 1.01
NECAB3-213ENST00000488489 A0A0U1RQG5 324 aaPredicted RBP21.37■■□□□ 1.01
NECAB3-213ENST00000488489 A8MXQ7 604 aa21.37■■□□□ 1.01
NECAB3-213ENST00000488489 THP07101 528 aa21.37■■□□□ 1.01
NECAB3-213ENST00000488489 PDGFRBP09619 1106 aa21.37■■□□□ 1.01
NECAB3-213ENST00000488489 PDCLQ13371 301 aa21.37■■□□□ 1.01
NECAB3-213ENST00000488489 SV2CQ496J9 727 aa21.37■■□□□ 1.01
NECAB3-213ENST00000488489 ADAT2Q7Z6V5 191 aaKnown RBP21.37■■□□□ 1.01
NECAB3-213ENST00000488489 UNC93AQ86WB7 457 aa21.37■■□□□ 1.01
NECAB3-213ENST00000488489 RNF169Q8NCN4 708 aa21.37■■□□□ 1.01
NECAB3-213ENST00000488489 APPL2Q8NEU8 664 aa21.37■■□□□ 1.01
NECAB3-213ENST00000488489 C18orf8Q96DM3 657 aa21.37■■□□□ 1.01
NECAB3-213ENST00000488489 PLEKHA4Q9H4M7 779 aa21.37■■□□□ 1.01
NECAB3-213ENST00000488489 ARVCFO00192 962 aa21.37■■□□□ 1.01
NECAB3-213ENST00000488489 CAPN2P17655 700 aa21.37■■□□□ 1.01
NECAB3-213ENST00000488489 LEKR1Q6ZMV7 388 aa21.37■■□□□ 1.01
NECAB3-213ENST00000488489 XYLT1Q86Y38 959 aa21.37■■□□□ 1.01
NECAB3-213ENST00000488489 DDX47Q9H0S4 455 aaKnown RBP21.37■■□□□ 1.01
NECAB3-213ENST00000488489 SLC38A7Q9NVC3 462 aa21.37■■□□□ 1.01
NECAB3-213ENST00000488489 STRIP2Q9ULQ0 834 aa21.37■■□□□ 1.01
NECAB3-213ENST00000488489 SQORQ9Y6N5 450 aa21.37■■□□□ 1.01
NECAB3-213ENST00000488489 MKI67P46013 3256 aaKnown RBP21.36■■□□□ 1.01
NECAB3-213ENST00000488489 CAND2O75155 1236 aa21.36■■□□□ 1.01
NECAB3-213ENST00000488489 GNL1P36915 607 aaPredicted RBP21.36■■□□□ 1.01
NECAB3-213ENST00000488489 CLCNKBP51801 687 aa21.36■■□□□ 1.01
NECAB3-213ENST00000488489 RWDD2BP57060 319 aa21.36■■□□□ 1.01
NECAB3-213ENST00000488489 TAS2R40P59535 323 aa21.36■■□□□ 1.01
NECAB3-213ENST00000488489 GOLGA7BQ2TAP0 167 aa21.36■■□□□ 1.01
NECAB3-213ENST00000488489 PKDCCQ504Y2 493 aa21.36■■□□□ 1.01
NECAB3-213ENST00000488489 TTC30AQ86WT1 665 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms