RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 TUBB3Q13509 450 aa5.38□□□□□ -1.55
ITGB1-214ENST00000488427 RAB32Q13637 225 aa5.38□□□□□ -1.55
ITGB1-214ENST00000488427 GBX1Q14549 363 aa5.38□□□□□ -1.55
ITGB1-214ENST00000488427 LRRC41Q15345 812 aa5.38□□□□□ -1.55
ITGB1-214ENST00000488427 NPNTQ6UXI9 565 aa5.38□□□□□ -1.55
ITGB1-214ENST00000488427 Q6YL49 198 aa5.38□□□□□ -1.55
ITGB1-214ENST00000488427 MAEAQ7L5Y9 396 aa5.38□□□□□ -1.55
ITGB1-214ENST00000488427 RAVER1Q8IY67 606 aaKnown RBP5.38□□□□□ -1.55
ITGB1-214ENST00000488427 ADGRG5Q8IZF4 528 aa5.38□□□□□ -1.55
ITGB1-214ENST00000488427 PSD4Q8NDX1 1056 aa5.38□□□□□ -1.55
ITGB1-214ENST00000488427 POC1BQ8TC44 478 aa5.38□□□□□ -1.55
ITGB1-214ENST00000488427 B3GNT5Q9BYG0 378 aa5.38□□□□□ -1.55
ITGB1-214ENST00000488427 LRRC27Q9C0I9 530 aa5.38□□□□□ -1.55
ITGB1-214ENST00000488427 KCTD5Q9NXV2 234 aa5.38□□□□□ -1.55
ITGB1-214ENST00000488427 CTTNBP2NLQ9P2B4 639 aa5.38□□□□□ -1.55
ITGB1-214ENST00000488427 TMX2Q9Y320 296 aa5.38□□□□□ -1.55
ITGB1-214ENST00000488427 MAST3O60307 1309 aa5.38□□□□□ -1.55
ITGB1-214ENST00000488427 ARID4BQ4LE39 1312 aaPredicted RBP5.38□□□□□ -1.55
ITGB1-214ENST00000488427 RUSC2Q8N2Y8 1516 aa5.38□□□□□ -1.55
ITGB1-214ENST00000488427 CFAP69A5D8W1 941 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 ISM1B1AKI9 464 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 GOLIM4O00461 696 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 TBC1D4O60343 1298 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 SUN1O94901 812 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 CD6P30203 668 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 PTTG1IPP53801 180 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 WNT3P56703 355 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 LOXL3P58215 753 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 IQCB1Q15051 598 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 LONRF3Q496Y0 759 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 IGFL4Q6B9Z1 124 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 Q6ZNX1 250 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 CCDC149Q6ZUS6 474 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 OVCH2Q7RTZ1 564 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 GPR149Q86SP6 731 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 PCSK9Q8NBP7 692 aaKnown RBP5.37□□□□□ -1.55
ITGB1-214ENST00000488427 SSH3Q8TE77 659 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 ASB10Q8WXI3 467 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 LINC00476Q8WZB0 136 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 Q96MF0 132 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 ALG8Q9BVK2 526 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 ING1Q9UK53 422 aaPredicted RBP5.37□□□□□ -1.55
ITGB1-214ENST00000488427 TPCN1Q9ULQ1 816 aa5.37□□□□□ -1.55
ITGB1-214ENST00000488427 FRMPD2Q68DX3 1309 aaPredicted RBP5.37□□□□□ -1.55
ITGB1-214ENST00000488427 E9PLN8 166 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 FOXN3O00409 490 aaPredicted RBP5.36□□□□□ -1.55
ITGB1-214ENST00000488427 YY2O15391 372 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 PROM1O43490 865 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 UNC5CO95185 931 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 ZBED1O96006 694 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 LRPAP1P30533 357 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 SLC7A1P30825 629 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 GCLCP48506 637 aaPredicted RBP5.36□□□□□ -1.55
ITGB1-214ENST00000488427 FSTL1Q12841 308 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 POLD3Q15054 466 aaPredicted RBP5.36□□□□□ -1.55
ITGB1-214ENST00000488427 PPP1R32Q7Z5V6 425 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 LDLRAD3Q86YD5 345 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 KIAA0319LQ8IZA0 1049 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 FAM9AQ8IZU1 332 aaPredicted RBP5.36□□□□□ -1.55
ITGB1-214ENST00000488427 SLC44A3Q8N4M1 653 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 Q8NA96 180 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 FAM46DQ8NEK8 389 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 TTC8Q8TAM2 541 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 PPP1R35Q8TAP8 253 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 NACC2Q96BF6 587 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 CHFRQ96EP1 664 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 C8orf48Q96LL4 319 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 VKORC1Q9BQB6 163 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 ETAA1Q9NY74 926 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 CHPF2Q9P2E5 772 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 HESX1Q9UBX0 185 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 L1RE1Q9UN81 338 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.36□□□□□ -1.55
ITGB1-214ENST00000488427 TTC37Q6PGP7 1564 aa5.36□□□□□ -1.55
ITGB1-214ENST00000488427 GRID2IPA4D2P6 1211 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 MPPED1O15442 326 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 NXPH3O95157 252 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 KIF20AO95235 890 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 EN2P19622 333 aaPredicted RBP5.35□□□□□ -1.55
ITGB1-214ENST00000488427 PPIFP30405 207 aaKnown RBP5.35□□□□□ -1.55
ITGB1-214ENST00000488427 FOLR3P41439 243 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 PXNP49023 591 aaPredicted RBP5.35□□□□□ -1.55
ITGB1-214ENST00000488427 SEC24CP53992 1094 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 CNN3Q15417 329 aaKnown RBP5.35□□□□□ -1.55
ITGB1-214ENST00000488427 MGAT5BQ3V5L5 792 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 CD300EQ496F6 205 aaPredicted RBP5.35□□□□□ -1.55
ITGB1-214ENST00000488427 PLAC9Q5JTB6 97 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 SLC30A10Q6XR72 485 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 ZNF627Q7L945 461 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 CHST15Q7LFX5 561 aaPredicted RBP5.35□□□□□ -1.55
ITGB1-214ENST00000488427 DGKHQ86XP1 1220 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 VRK3Q8IV63 474 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 CAGE1Q8TC20 777 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 IPCEF1Q8WWN9 437 aaPredicted RBP5.35□□□□□ -1.55
ITGB1-214ENST00000488427 LRTOMTQ8WZ04 291 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 FBXL20Q96IG2 436 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 LRFN3Q9BTN0 628 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 SPATA5L1Q9BVQ7 753 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 TRIM54Q9BYV2 358 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 TPSD1Q9BZJ3 242 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms