RNA–Protein interactions for RNA: ENST00000488166.1

ITSN1-230, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 986 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-230ENST00000488166 RBAKQ9NYW8 714 aaPredicted RBP18.3■□□□□ 0.52
ITSN1-230ENST00000488166 GREB1Q4ZG55 1949 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 SPAG17Q6Q759 2223 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 MYMKA6NI61 221 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 PPP1R37O75864 691 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 PAPSS2O95340 614 aaPredicted RBP18.29■□□□□ 0.52
ITSN1-230ENST00000488166 LDHAP00338 332 aaKnown RBP18.29■□□□□ 0.52
ITSN1-230ENST00000488166 KRT19P08727 400 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 CSH1P0DML2 217 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 CSH2P0DML3 217 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 PDCP20941 246 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 DDX6P26196 483 aaKnown RBP eCLIP18.29■□□□□ 0.52
ITSN1-230ENST00000488166 GPR15P49685 360 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 NLRP12P59046 1061 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 RUNX3Q13761 415 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 CCINQ13939 588 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 NFE2Q16621 373 aaPredicted RBP18.29■□□□□ 0.52
ITSN1-230ENST00000488166 SDHAF4Q5VUM1 108 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 CC2D1AQ6P1N0 951 aaPredicted RBP18.29■□□□□ 0.52
ITSN1-230ENST00000488166 SYNPOQ8N3V7 929 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 CLIC6Q96NY7 704 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 SEMA4GQ9NTN9 838 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 TDP1Q9NUW8 608 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 TMLHEQ9NVH6 421 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 C2orf42Q9NWW7 574 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 DDX43Q9NXZ2 648 aaKnown RBP18.29■□□□□ 0.52
ITSN1-230ENST00000488166 FBXO2Q9UK22 296 aaPredicted RBP18.29■□□□□ 0.52
ITSN1-230ENST00000488166 R3HCC1Q9Y3T6 440 aaKnown RBP18.29■□□□□ 0.52
ITSN1-230ENST00000488166 PCDHB13Q9Y5F0 798 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 SRPRBQ9Y5M8 271 aaKnown RBP18.29■□□□□ 0.52
ITSN1-230ENST00000488166 EML5Q05BV3 1969 aa18.29■□□□□ 0.52
ITSN1-230ENST00000488166 HELZP42694 1942 aaKnown RBP18.29■□□□□ 0.52
ITSN1-230ENST00000488166 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.28■□□□□ 0.52
ITSN1-230ENST00000488166 GOLGA8IPA6NC78 632 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 GOLGA8JA6NMD2 632 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 LRP3O75074 770 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 F11P03951 625 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 ACAT1P24752 427 aaKnown RBP18.28■□□□□ 0.52
ITSN1-230ENST00000488166 WNT7BP56706 349 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 MYL7Q01449 175 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 GRSF1Q12849 480 aaKnown RBP eCLIP18.28■□□□□ 0.52
ITSN1-230ENST00000488166 TXNDC8Q6A555 127 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 TRIM68Q6AZZ1 485 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 BRSK2Q8IWQ3 736 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 PDCL2Q8N4E4 241 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 CSGALNACT2Q8N6G5 542 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 ZSWIM2Q8NEG5 633 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 DNAJC19Q96DA6 116 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 EBF3Q9H4W6 596 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 KIF9Q9HAQ2 790 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 L1RE1Q9UN81 338 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 CCL26Q9Y258 94 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 MYO16Q9Y6X6 1858 aa18.28■□□□□ 0.52
ITSN1-230ENST00000488166 TMEM191BP0C7N4 346 aa18.27■□□□□ 0.52
ITSN1-230ENST00000488166 HMGA1P17096 107 aaKnown RBP18.27■□□□□ 0.52
ITSN1-230ENST00000488166 STAT6P42226 847 aa18.27■□□□□ 0.52
ITSN1-230ENST00000488166 CASP5P51878 434 aa18.27■□□□□ 0.52
ITSN1-230ENST00000488166 RPL10AP62906 217 aaKnown RBP18.27■□□□□ 0.52
ITSN1-230ENST00000488166 DDR2Q16832 855 aa18.27■□□□□ 0.52
ITSN1-230ENST00000488166 FAM173BQ6P4H8 233 aa18.27■□□□□ 0.52
ITSN1-230ENST00000488166 PRR23CQ6ZRP0 262 aa18.27■□□□□ 0.52
ITSN1-230ENST00000488166 TMEM150AQ86TG1 271 aa18.27■□□□□ 0.52
ITSN1-230ENST00000488166 WDR5BQ86VZ2 330 aa18.27■□□□□ 0.52
ITSN1-230ENST00000488166 C1orf127Q8N9H9 656 aa18.27■□□□□ 0.52
ITSN1-230ENST00000488166 NETO1Q8TDF5 533 aa18.27■□□□□ 0.52
ITSN1-230ENST00000488166 USP13Q92995 863 aaPredicted RBP18.27■□□□□ 0.52
ITSN1-230ENST00000488166 ACBD6Q9BR61 282 aa18.27■□□□□ 0.52
ITSN1-230ENST00000488166 STRA6Q9BX79 667 aa18.27■□□□□ 0.52
ITSN1-230ENST00000488166 PANK2Q9BZ23 570 aa18.27■□□□□ 0.52
ITSN1-230ENST00000488166 PCIF1Q9H4Z3 704 aa18.27■□□□□ 0.52
ITSN1-230ENST00000488166 UXTQ9UBK9 157 aaPredicted RBP18.27■□□□□ 0.52
ITSN1-230ENST00000488166 SLC8A2Q9UPR5 921 aa18.27■□□□□ 0.52
ITSN1-230ENST00000488166 SNX9Q9Y5X1 595 aa18.27■□□□□ 0.52
ITSN1-230ENST00000488166 EXTL3O43909 919 aa18.26■□□□□ 0.51
ITSN1-230ENST00000488166 GARTP22102 1010 aa18.26■□□□□ 0.51
ITSN1-230ENST00000488166 CYP2F1P24903 491 aa18.26■□□□□ 0.51
ITSN1-230ENST00000488166 HOXC13P31276 330 aa18.26■□□□□ 0.51
ITSN1-230ENST00000488166 PXNP49023 591 aaPredicted RBP18.26■□□□□ 0.51
ITSN1-230ENST00000488166 AMPD2Q01433 879 aa18.26■□□□□ 0.51
ITSN1-230ENST00000488166 ALCAMQ13740 583 aa18.26■□□□□ 0.51
ITSN1-230ENST00000488166 CSRP2Q16527 193 aa18.26■□□□□ 0.51
ITSN1-230ENST00000488166 INTS6LQ5JSJ4 861 aaKnown RBP18.26■□□□□ 0.51
ITSN1-230ENST00000488166 CCDC73Q6ZRK6 1079 aa18.26■□□□□ 0.51
ITSN1-230ENST00000488166 SPATA2LQ8IUW3 424 aaPredicted RBP18.26■□□□□ 0.51
ITSN1-230ENST00000488166 TMEM86AQ8N2M4 240 aa18.26■□□□□ 0.51
ITSN1-230ENST00000488166 FAM160A2Q8N612 972 aaPredicted RBP18.26■□□□□ 0.51
ITSN1-230ENST00000488166 LEO1Q8WVC0 666 aaPredicted RBP18.26■□□□□ 0.51
ITSN1-230ENST00000488166 FAM83CQ9BQN1 747 aa18.26■□□□□ 0.51
ITSN1-230ENST00000488166 TRPC7Q9HCX4 862 aa18.26■□□□□ 0.51
ITSN1-230ENST00000488166 HPS4Q9NQG7 708 aa18.26■□□□□ 0.51
ITSN1-230ENST00000488166 OLFML3Q9NRN5 406 aa18.26■□□□□ 0.51
ITSN1-230ENST00000488166 PANK4Q9NVE7 773 aa18.26■□□□□ 0.51
ITSN1-230ENST00000488166 GTF3C4Q9UKN8 822 aa18.26■□□□□ 0.51
ITSN1-230ENST00000488166 ITGA11Q9UKX5 1188 aa18.26■□□□□ 0.51
ITSN1-230ENST00000488166 KIAA1549LQ6ZVL6 1849 aa18.26■□□□□ 0.51
ITSN1-230ENST00000488166 ATG13O75143 517 aa18.25■□□□□ 0.51
ITSN1-230ENST00000488166 ARSAP15289 507 aa18.25■□□□□ 0.51
ITSN1-230ENST00000488166 KCNA4P22459 653 aa18.25■□□□□ 0.51
ITSN1-230ENST00000488166 RBP5P82980 135 aa18.25■□□□□ 0.51
ITSN1-230ENST00000488166 PKN3Q6P5Z2 889 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms