RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 SERTAD1Q9UHV2 236 aa12.15□□□□□ -0.46
NIPAL3-207ENST00000488155 GTF3C4Q9UKN8 822 aa12.15□□□□□ -0.46
NIPAL3-207ENST00000488155 ITGA11Q9UKX5 1188 aa12.15□□□□□ -0.46
NIPAL3-207ENST00000488155 PIAS3Q9Y6X2 628 aa12.15□□□□□ -0.46
NIPAL3-207ENST00000488155 GPR179Q6PRD1 2367 aa12.15□□□□□ -0.46
NIPAL3-207ENST00000488155 SLC38A8A6NNN8 435 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 NCAM2O15394 837 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 TGFB1I1O43294 461 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 PRAMEF12O95522 483 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 DLATP10515 647 aaKnown RBP12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 TNNI1P19237 187 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 CCNE1P24864 410 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 DUOXA2Q1HG44 320 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 RESP18Q5W5W9 173 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 EPM2AIP1Q7L775 607 aaPredicted RBP12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 ADGRF2Q8IZF7 708 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 LRRC52Q8N7C0 313 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 C2orf15Q8WU43 125 aaKnown RBP12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 SCFD1Q8WVM8 642 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 FAM3CQ92520 227 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 CCDC127Q96BQ5 260 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 HPDLQ96IR7 371 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 GCNAQ96QF7 691 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 OSBPL6Q9BZF3 934 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 TRPV4Q9HBA0 871 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 AGPAT3Q9NRZ7 376 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 HSFX1Q9UBD0 423 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 CFAP45Q9UL16 551 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 MRPS17Q9Y2R5 130 aaKnown RBP12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 EML5Q05BV3 1969 aa12.14□□□□□ -0.47
NIPAL3-207ENST00000488155 A0A1B0GVL5 298 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 MYBPHLA2RUH7 354 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 MAN2B1O00754 1011 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 KIAA0391O15091 583 aaKnown RBP12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 EIF3DO15371 548 aaKnown RBP eCLIP12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 ATP2C2O75185 946 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 PDGFRBP09619 1106 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 CDC25CP30307 473 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 KPNA1P52294 538 aaPredicted RBP12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 PSMC1P62191 440 aaKnown RBP12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 FZD5Q13467 585 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 SURF1Q15526 300 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 SNRNP35Q16560 246 aaKnown RBP12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 NFE2Q16621 373 aaPredicted RBP12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 SOWAHAQ2M3V2 549 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 INTS6LQ5JSJ4 861 aaKnown RBP12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 SCN4BQ8IWT1 228 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 CEP57L1Q8IYX8 460 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 TMEM86AQ8N2M4 240 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 TOP6BLQ8N6T0 577 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 MAB21L3Q8N8X9 362 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 TTC16Q8NEE8 873 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 CLDN23Q96B33 292 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 FNBP1Q96RU3 617 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 NELL2Q99435 816 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 ACBD6Q9BR61 282 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 SLC46A2Q9BY10 475 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 TASP1Q9H6P5 420 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 LMAN1LQ9HAT1 526 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 GDAP2Q9NXN4 497 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 GTSE1Q9NYZ3 720 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 RCOR1Q9UKL0 485 aa12.13□□□□□ -0.47
NIPAL3-207ENST00000488155 WDR87Q6ZQQ6 2873 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 ARNTLO00327 626 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 CHADO15335 359 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 CLSTN1O94985 981 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 FGF19O95750 216 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 CST3P01034 146 aaPredicted RBP12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 LMNAP02545 664 aaKnown RBP12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 F11P03951 625 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 PDIA4P13667 645 aaKnown RBP12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 HMGA1P17096 107 aaKnown RBP12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 LMO2P25791 158 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 LHX1P48742 406 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 TNK2Q07912 1038 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 EHHADHQ08426 723 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 SMARCB1Q12824 385 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 MYO1EQ12965 1108 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 MTAPQ13126 283 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 TXNDC8Q6A555 127 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 CNNM4Q6P4Q7 775 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 HS2ST1Q7LGA3 356 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 TRAPPC11Q7Z392 1133 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 SPATA2LQ8IUW3 424 aaPredicted RBP12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 XXYLT1Q8NBI6 393 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 BPIFB1Q8TDL5 484 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 E2F7Q96AV8 911 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 ELMO3Q96BJ8 720 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 MMS19Q96T76 1030 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 HINFPQ9BQA5 517 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 SYT15Q9BQS2 421 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 MAGEF1Q9HAY2 307 aa12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 RBM12Q9NTZ6 932 aaKnown RBP12.12□□□□□ -0.47
NIPAL3-207ENST00000488155 KLRC4O43908 158 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 CSH1P0DML2 217 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 CSH2P0DML3 217 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 PCSK1P29120 753 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 MAGEA9P43362 315 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 CASP4P49662 377 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 NLRP12P59046 1061 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms