RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 CHRNB1P11230 501 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 HOXA11P31270 313 aaPredicted RBP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 HNRNPUQ00839 825 aaKnown RBP eCLIP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 PTH1RQ03431 593 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 ILKQ13418 452 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 CCINQ13939 588 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 DBN1Q16643 649 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 INAVAQ3KP66 663 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 RRP12Q5JTH9 1297 aaKnown RBP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 LRCH2Q5VUJ6 765 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 DAB2IPQ5VWQ8 1189 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 IL27RAQ6UWB1 636 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 SYT13Q7L8C5 426 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 CCNJLQ8IV13 435 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 LILRB2Q8N423 598 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 ZNF557Q8N988 423 aaPredicted RBP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 LNX1Q8TBB1 728 aaPredicted RBP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 TMEM40Q8WWA1 233 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 GTPBP3Q969Y2 492 aaKnown RBP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 RPGRIP1Q96KN7 1286 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 MYRFLQ96LU7 910 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 TBC1D32Q96NH3 1257 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 NTPCRQ9BSD7 190 aaKnown RBP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 MYL10Q9BUA6 226 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 SLC32A1Q9H598 525 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 TTC12Q9H892 705 aaPredicted RBP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 SUSD2Q9UGT4 822 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 RBM8AQ9Y5S9 174 aaKnown RBP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 OBSL1O75147 1896 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 VWA8A3KMH1 1905 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 CCDC195A0A1B0GUA6 201 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 ESYT3A0FGR9 886 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 C10orf142B7Z368 130 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 C2CD2LO14523 706 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 SLC9A3R1O14745 358 aaPredicted RBP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 MSH4O15457 936 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 TEX28O15482 410 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 MARCH6O60337 910 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 BMP15O95972 392 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 ARP10275 920 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 CPB1P15086 417 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 ATF2P15336 505 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 EPCAMP16422 314 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 PSMC3P17980 439 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 PNPLA4P41247 253 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 CXCL12P48061 93 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 NLRP11P59045 1033 aaKnown RBP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 ZNF445P59923 1031 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 SNAP25P60880 206 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 PTSQ03393 145 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 SERINC3Q13530 473 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 PDIA5Q14554 519 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 EMC2Q15006 297 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 PSMD5Q16401 504 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 HIF1AQ16665 826 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 TMEM196Q5HYL7 178 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 FAM102BQ5T8I3 360 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 ANKRD45Q5TZF3 282 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 ERICH6BQ5W0A0 696 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 ZNF280DQ6N043 979 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 SWSAP1Q6NVH7 229 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 CATSPER4Q7RTX7 472 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 LIMS2Q7Z4I7 341 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 FILIP1Q7Z7B0 1213 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 TRIM22Q8IYM9 498 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 CEP120Q8N960 986 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 ZNF461Q8TAF7 563 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 ERMNQ8TAM6 284 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 MRFAP1L1Q96HT8 127 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 FUBP3Q96I24 572 aaKnown RBP eCLIP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 SPATA17Q96L03 361 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 CNOT6LQ96LI5 555 aaKnown RBP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 TBATAQ96M53 351 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 DEPDC7Q96QD5 511 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 ADPGKQ9BRR6 497 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 LLPHQ9BRT6 129 aaKnown RBP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 LGR4Q9BXB1 951 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 LRRC3Q9BY71 257 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 UNC45AQ9H3U1 944 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 ZFP14Q9HCL3 533 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 BRMS1Q9HCU9 246 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 SH2B1Q9NRF2 756 aaPredicted RBP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 TOMM22Q9NS69 142 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 FANCLQ9NW38 375 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 SPATA6Q9NWH7 488 aaPredicted RBP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 GABBR1Q9UBS5 961 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 ISY1Q9ULR0 285 aaKnown RBP2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 PCDHB10Q9UN67 800 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 AKT3Q9Y243 479 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 IPPQ9Y573 584 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 PCDHGA1Q9Y5H4 931 aa2.98□□□□□ -1.93
DEPDC1-203ENST00000488146 A0A096LPE4 126 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 A0A1W2PPZ6 126 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 MED19A0JLT2 244 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 CDC14CA4D256 554 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 ARL5CA6NH57 179 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 SHISA7A6NL88 538 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 GOLGA8AA7E2F4 631 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 GOLGA8BA8MQT2 603 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 FAM86B1E9PN63 330 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms