RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 KBTBD7Q8WVZ9 684 aa4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 SCAMP4Q969E2 229 aa4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 PDLIM2Q96JY6 352 aa4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 HEPHQ9BQS7 1158 aa4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 AIFM2Q9BRQ8 373 aa4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 ZNF700Q9H0M5 742 aa4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 ZNF70Q9UC06 446 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 STAP2Q9UGK3 403 aa4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 SLC23A1Q9UHI7 598 aa4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 NEU2Q9Y3R4 380 aa4.62□□□□□ -1.67
HMGB1P36-201ENST00000487709 A0A1B0GTW7 788 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 ZNF785A8K8V0 405 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 TBC1D4O60343 1298 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 PROP1O75360 226 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 MAP4K4O95819 1239 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 THP07101 528 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 ZNF135P52742 658 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 SOX8P57073 446 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 PSMC1P62191 440 aaKnown RBP4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 CXADRP78310 365 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 RAB32Q13637 225 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 KIF22Q14807 665 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 UTP14CQ5TAP6 766 aaKnown RBP4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 LMBRD2Q68DH5 695 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 FAM90A1Q86YD7 464 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 DCBLD1Q8N8Z6 715 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 PCSK9Q8NBP7 692 aaKnown RBP4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 IPCEF1Q8WWN9 437 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 DDB2Q92466 427 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 DMRTA2Q96SC8 542 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 PNKPQ96T60 521 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 SMOQ99835 787 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 MYOCQ99972 504 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 CNPPD1Q9BV87 410 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 GSTO2Q9H4Y5 243 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 PNPLA8Q9NP80 782 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 PCDHA6Q9UN73 950 aa4.61□□□□□ -1.67
HMGB1P36-201ENST00000487709 RHPN2P1A8MT19 583 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 PMM2O15305 246 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 ERN1O75460 977 aaKnown RBP4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 AGFG2O95081 481 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 CKBP12277 381 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 XRCC6P12956 609 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 FGFR4P22455 802 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 AK2P54819 239 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 HSD11B2P80365 405 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 EXOSC9Q06265 439 aaKnown RBP4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 SEMA5AQ13591 1074 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 UBE4AQ14139 1066 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 MAP9Q49MG5 647 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 PPP1R3BQ86XI6 285 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 KRT78Q8N1N4 520 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 PTCD3Q96EY7 689 aaKnown RBP4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 APIPQ96GX9 242 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 MED15Q96RN5 788 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 PSMD1Q99460 953 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 C1orf43Q9BWL3 253 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 IMPG2Q9BZV3 1241 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 ZMAT3Q9HA38 289 aaKnown RBP4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 GALNT9Q9HCQ5 603 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 ZSCAN32Q9NX65 697 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 ARPP21Q9UBL0 812 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 AFF4Q9UHB7 1163 aaKnown RBP4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 MTO1Q9Y2Z2 717 aaKnown RBP4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 PLEKHM1Q9Y4G2 1056 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 PCDHGB6Q9Y5F9 930 aa4.6□□□□□ -1.67
HMGB1P36-201ENST00000487709 CCDC78A2IDD5 438 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 A6NNZ2 444 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 SOAT2O75908 522 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 ZFPL1O95159 310 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 KITP10721 976 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 MYF5P13349 255 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 ZKSCAN1P17029 563 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 EN2P19622 333 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 GCSHP23434 173 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 BIRC2Q13490 618 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 CNGA2Q16280 664 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 PREPLQ4J6C6 727 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 APOA5Q6Q788 366 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 AATKQ6ZMQ8 1374 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 SAMD3Q8N6K7 520 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 SLC17A8Q8NDX2 589 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 PLBD2Q8NHP8 589 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 IL31RAQ8NI17 732 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 MYD88Q99836 296 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 KRTAP1-5Q9BYS1 174 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 SERHLQ9NQF3 203 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 FBXO34Q9NWN3 711 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 CDYLQ9Y232 598 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 MED16Q9Y2X0 877 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 COMMD10Q9Y6G5 202 aa4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.59□□□□□ -1.67
HMGB1P36-201ENST00000487709 MANSC4A6NHS7 340 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P36-201ENST00000487709 M0QYG6 137 aa4.58□□□□□ -1.68
HMGB1P36-201ENST00000487709 GPANK1O95872 356 aa4.58□□□□□ -1.68
HMGB1P36-201ENST00000487709 AHSGP02765 367 aa4.58□□□□□ -1.68
HMGB1P36-201ENST00000487709 GRPP07492 148 aa4.58□□□□□ -1.68
HMGB1P36-201ENST00000487709 CYP2C9P11712 490 aa4.58□□□□□ -1.68
HMGB1P36-201ENST00000487709 PHKA1P46020 1223 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms