RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 ZNF689Q96CS4 500 aaPredicted RBP7.12□□□□□ -1.27
SEC22C-215ENST00000487701 EPSTI1Q96J88 318 aa7.12□□□□□ -1.27
SEC22C-215ENST00000487701 CHAMP1Q96JM3 812 aa7.12□□□□□ -1.27
SEC22C-215ENST00000487701 AK8Q96MA6 479 aa7.12□□□□□ -1.27
SEC22C-215ENST00000487701 YME1L1Q96TA2 773 aa7.12□□□□□ -1.27
SEC22C-215ENST00000487701 CDX2Q99626 313 aaPredicted RBP7.12□□□□□ -1.27
SEC22C-215ENST00000487701 RAD9AQ99638 391 aa7.12□□□□□ -1.27
SEC22C-215ENST00000487701 CSRNP2Q9H175 543 aa7.12□□□□□ -1.27
SEC22C-215ENST00000487701 PRDM12Q9H4Q4 367 aa7.12□□□□□ -1.27
SEC22C-215ENST00000487701 CERS4Q9HA82 394 aa7.12□□□□□ -1.27
SEC22C-215ENST00000487701 RGS18Q9NS28 235 aa7.12□□□□□ -1.27
SEC22C-215ENST00000487701 BLOC1S4Q9NUP1 217 aa7.12□□□□□ -1.27
SEC22C-215ENST00000487701 AGPAT5Q9NUQ2 364 aa7.12□□□□□ -1.27
SEC22C-215ENST00000487701 DNM3Q9UQ16 869 aa7.12□□□□□ -1.27
SEC22C-215ENST00000487701 INSL6Q9Y581 213 aa7.12□□□□□ -1.27
SEC22C-215ENST00000487701 SRPRBQ9Y5M8 271 aaKnown RBP7.12□□□□□ -1.27
SEC22C-215ENST00000487701 VWA8A3KMH1 1905 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 ADGRA3Q8IWK6 1321 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 NPHP3-ACAD11A0A0J9YXS1 232 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 DENND3A2RUS2 1198 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 MEIS3P2A8K0S8 358 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 CHURC1-FNTBB4DL54 471 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 RFXAPO00287 272 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 ASAP2O43150 1006 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 TSPAN1O60635 241 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 HIP1RO75146 1068 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 EDN1P05305 212 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 PLA2G4BP0C869 781 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 FGFR1P11362 822 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 SFPQP23246 707 aaKnown RBP eCLIP7.11□□□□□ -1.27
SEC22C-215ENST00000487701 HOXA11P31270 313 aaPredicted RBP7.11□□□□□ -1.27
SEC22C-215ENST00000487701 UBA7P41226 1012 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 SLC12A3P55017 1021 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 ERVK-21P61565 698 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 MXD4Q14582 209 aaPredicted RBP7.11□□□□□ -1.27
SEC22C-215ENST00000487701 STK38Q15208 465 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 ODR4Q5SWX8 454 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 UBXN11Q5T124 520 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 CDCA2Q69YH5 1023 aaPredicted RBP7.11□□□□□ -1.27
SEC22C-215ENST00000487701 RINT1Q6NUQ1 792 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 C1orf186Q6ZWK4 172 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 SLC24A5Q71RS6 500 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 CATSPER4Q7RTX7 472 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 SRGAP1Q7Z6B7 1085 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 ECHDC2Q86YB7 292 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 SYT2Q8N9I0 419 aaPredicted RBP7.11□□□□□ -1.27
SEC22C-215ENST00000487701 LINC00301Q8NCQ3 95 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 BAHD1Q8TBE0 780 aaPredicted RBP7.11□□□□□ -1.27
SEC22C-215ENST00000487701 PIWIL2Q8TC59 973 aaKnown RBP7.11□□□□□ -1.27
SEC22C-215ENST00000487701 ARNTL2Q8WYA1 636 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 C17orf80Q9BSJ5 609 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 KIFC3Q9BVG8 833 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 NFKBIZQ9BYH8 718 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 CCSER1Q9C0I3 900 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 NT5C3AQ9H0P0 336 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 C1orf112Q9NSG2 853 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 LMCD1Q9NZU5 365 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 MTUS1Q9ULD2 1270 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 PIN4Q9Y237 131 aaKnown RBP7.11□□□□□ -1.27
SEC22C-215ENST00000487701 PCDHB14Q9Y5E9 798 aa7.11□□□□□ -1.27
SEC22C-215ENST00000487701 TCF20Q9UGU0 1960 aaKnown RBP7.11□□□□□ -1.27
SEC22C-215ENST00000487701 VCANP13611 3396 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 A0A087X0B3 334 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 A0A0U1RQF3 1178 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 LRRIQ4A6NIV6 560 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 INO80B-WBP1J3KQ70 363 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 SPTLC2O15270 562 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 B4GALT5O43286 388 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 SLC26A4O43511 780 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 LPXNO60711 386 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 YEATS4O95619 227 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 SSBP05455 408 aaKnown RBP eCLIP7.1□□□□□ -1.27
SEC22C-215ENST00000487701 DDIT3P35638 169 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 POU5F1BQ06416 359 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 RAD51AP2Q09MP3 1159 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 TFDP1Q14186 410 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 BECN1Q14457 450 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 PAN2Q504Q3 1202 aaKnown RBP7.1□□□□□ -1.27
SEC22C-215ENST00000487701 NAALADL2Q58DX5 795 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 ARSHQ5FYA8 562 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 CLLU1OSQ5K130 101 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 AXDND1Q5T1B0 1012 aaPredicted RBP7.1□□□□□ -1.27
SEC22C-215ENST00000487701 TWF2Q6IBS0 349 aaKnown RBP7.1□□□□□ -1.27
SEC22C-215ENST00000487701 CMTR2Q8IYT2 770 aaKnown RBP7.1□□□□□ -1.27
SEC22C-215ENST00000487701 GDPD5Q8WTR4 605 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 FAM168AQ92567 244 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 RAD54LQ92698 747 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 KIFAP3Q92845 792 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 CALML4Q96GE6 196 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 CPB2Q96IY4 423 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 CDK5RAP3Q96JB5 506 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 CCDC74BQ96LY2 380 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 ZNF396Q96N95 335 aaPredicted RBP7.1□□□□□ -1.27
SEC22C-215ENST00000487701 TGS1Q96RS0 853 aaKnown RBP7.1□□□□□ -1.27
SEC22C-215ENST00000487701 INO80BQ9C086 356 aaPredicted RBP7.1□□□□□ -1.27
SEC22C-215ENST00000487701 CCDC113Q9H0I3 377 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 TRIT1Q9H3H1 467 aaKnown RBP7.1□□□□□ -1.27
SEC22C-215ENST00000487701 CHST12Q9NRB3 414 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 TMEM161AQ9NX61 479 aa7.1□□□□□ -1.27
SEC22C-215ENST00000487701 UBP1Q9NZI7 540 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms