RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 FAM71DQ8N9W8 422 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 SEMA4DQ92854 862 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 SIX2Q9NPC8 291 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 FGFR1OP2Q9NVK5 253 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 WRAP73Q9P2S5 460 aaPredicted RBP12.38□□□□□ -0.43
TRA2B-214ENST00000487615 DCTN4Q9UJW0 460 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 UBQLN1Q9UMX0 589 aaKnown RBP12.38□□□□□ -0.43
TRA2B-214ENST00000487615 TAF1P21675 1872 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 CACNA1SQ13698 1873 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 IRF6O14896 467 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 CHUKO15111 745 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 RIPK2O43353 540 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 MCF2P10911 925 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 ESRRAP11474 423 aaPredicted RBP12.38□□□□□ -0.43
TRA2B-214ENST00000487615 PSMC4P43686 418 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 ACADSBP45954 432 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 GTF2A2P52657 109 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 SPDYCQ5MJ68 293 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 THEM5Q8N1Q8 247 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 ZNF526Q8TF50 670 aaPredicted RBP12.38□□□□□ -0.43
TRA2B-214ENST00000487615 CPB2Q96IY4 423 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 SMYD2Q9NRG4 433 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 PCYOX1Q9UHG3 505 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 SLC12A6Q9UHW9 1150 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 IPO11Q9UI26 975 aaKnown RBP12.38□□□□□ -0.43
TRA2B-214ENST00000487615 MYH8P13535 1937 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 DDX60Q8IY21 1712 aaKnown RBP12.38□□□□□ -0.43
TRA2B-214ENST00000487615 GOLGA8RI6L899 631 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 CALCAP01258 141 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 KCNA2P16389 499 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 KIZQ2M2Z5 673 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 MUM1Q2TAK8 710 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 DAW1Q8N136 415 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 CCT6BQ92526 530 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 ASB7Q9H672 318 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 BFARQ9NZS9 450 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 ZC3H7BQ9UGR2 993 aaKnown RBP12.38□□□□□ -0.43
TRA2B-214ENST00000487615 MID2Q9UJV3 735 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 CFAP73A6NFT4 308 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 F5H423 210 aaPredicted RBP12.37□□□□□ -0.43
TRA2B-214ENST00000487615 MAFO75444 373 aaPredicted RBP12.37□□□□□ -0.43
TRA2B-214ENST00000487615 SPAG6O75602 509 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 GLRA4Q5JXX5 417 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 NXNQ6DKJ4 435 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 RASGEF1CQ8N431 466 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 ACTL9Q8TC94 416 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 CHST7Q9NS84 486 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 MYO5AQ9Y4I1 1855 aaKnown RBP12.37□□□□□ -0.43
TRA2B-214ENST00000487615 PPP1R12AO14974 1030 aaPredicted RBP12.37□□□□□ -0.43
TRA2B-214ENST00000487615 EIF4BP23588 611 aaKnown RBP12.37□□□□□ -0.43
TRA2B-214ENST00000487615 SULT1E1P49888 294 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 DRG2P55039 364 aaKnown RBP12.37□□□□□ -0.43
TRA2B-214ENST00000487615 TSPY1Q01534 308 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 MORF4L2Q15014 288 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 SV2CQ496J9 727 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 WDR75Q8IWA0 830 aaKnown RBP12.37□□□□□ -0.43
TRA2B-214ENST00000487615 SMC1BQ8NDV3 1235 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 CAMKK2Q96RR4 588 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 CNPY3Q9BT09 278 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 TMEM121Q9BTD3 319 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 C6orf222P0C671 652 aaPredicted RBP12.37□□□□□ -0.43
TRA2B-214ENST00000487615 GNL1P36915 607 aaPredicted RBP12.37□□□□□ -0.43
TRA2B-214ENST00000487615 SESN3P58005 492 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 PID1Q7Z2X4 250 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 ACOT1Q86TX2 421 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 BSNDQ8WZ55 320 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 ETNK1Q9HBU6 452 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 ZFP69BQ9UJL9 534 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 PNPLA4P41247 253 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 ZNF280AP59817 542 aaPredicted RBP12.37□□□□□ -0.43
TRA2B-214ENST00000487615 ZNF200P98182 395 aaPredicted RBP12.37□□□□□ -0.43
TRA2B-214ENST00000487615 MFSD7Q6UXD7 560 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 PALB2Q86YC2 1186 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 LRRC34Q8IZ02 419 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 PDCD7Q8N8D1 485 aaKnown RBP12.37□□□□□ -0.43
TRA2B-214ENST00000487615 PCDHB18PQ96TA0 734 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 PPP1R12CQ9BZL4 782 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 SLC13A1Q9BZW2 595 aa12.37□□□□□ -0.43
TRA2B-214ENST00000487615 COL16A1Q07092 1604 aaPredicted RBP12.36□□□□□ -0.43
TRA2B-214ENST00000487615 FANCGO15287 622 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 ZNF862O60290 1169 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 CYP2C8P10632 490 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 CYP2B6P20813 491 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 TAF6P49848 677 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 COG7P83436 770 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 ASPHQ12797 758 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 THOC5Q13769 683 aaKnown RBP12.36□□□□□ -0.43
TRA2B-214ENST00000487615 CELF3Q5SZQ8 465 aaKnown RBP12.36□□□□□ -0.43
TRA2B-214ENST00000487615 TRPM8Q7Z2W7 1104 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 KATNAL2Q8IYT4 538 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 IQCKQ8N0W5 287 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 BBS5Q8N3I7 341 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 OR5B17Q8NGF7 314 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 ARHGAP28Q9P2N2 729 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 GGT7Q9UJ14 662 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 USP18Q9UMW8 372 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 VGLL3A8MV65 326 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 OPLAHO14841 1288 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 GJB6O95452 261 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 ZNF286BP0CG31 522 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms