RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 BAP1Q92560 729 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 ATP2A3Q93084 1043 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 ZMAT2Q96NC0 199 aaKnown RBP12.75□□□□□ -0.37
TRIM56-204ENST00000487252 CCDC113Q9H0I3 377 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 FAM124BQ9H5Z6 455 aaPredicted RBP12.75□□□□□ -0.37
TRIM56-204ENST00000487252 ZSWIM4Q9H7M6 989 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 SLC38A7Q9NVC3 462 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 RGL1Q9NZL6 768 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 SLC27A5Q9Y2P5 690 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 NUB1Q9Y5A7 615 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 PCDHGB2Q9Y5G2 931 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 BOD1L1Q8NFC6 3051 aa12.75□□□□□ -0.37
TRIM56-204ENST00000487252 ABCA12Q86UK0 2595 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 NBPF19A0A087WUL8 3843 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 M0QZQ0 153 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 ACKR2O00590 384 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 ZBTB43O43298 467 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 ADAM23O75077 832 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 DDX6P26196 483 aaKnown RBP eCLIP12.74□□□□□ -0.373e-7■■□□□ 13.4
TRIM56-204ENST00000487252 CXADRP78310 365 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 BFSP1Q12934 665 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 PRPF4BQ13523 1007 aaKnown RBP12.74□□□□□ -0.37
TRIM56-204ENST00000487252 MTF1Q14872 753 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 RTP5Q14D33 572 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 DCAF4L1Q3SXM0 396 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 BMP2KLQ5H9B9 411 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 ALLCQ8N6M5 410 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 MAB21L3Q8N8X9 362 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 TXNDC5Q8NBS9 432 aaKnown RBP12.74□□□□□ -0.37
TRIM56-204ENST00000487252 HMGB4Q8WW32 186 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 TTC9Q92623 222 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 ZNF419Q96HQ0 510 aaPredicted RBP12.74□□□□□ -0.37
TRIM56-204ENST00000487252 POLR3FQ9H1D9 316 aaPredicted RBP12.74□□□□□ -0.37
TRIM56-204ENST00000487252 PRDM16Q9HAZ2 1276 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 KCNMB3Q9NPA1 279 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 BCCIPQ9P287 314 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRIM56-204ENST00000487252 SUSD2Q9UGT4 822 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 RBM8AQ9Y5S9 174 aaKnown RBP12.74□□□□□ -0.37
TRIM56-204ENST00000487252 AHCTF1Q8WYP5 2266 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 CABIN1Q9Y6J0 2220 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 ANK1P16157 1881 aa12.74□□□□□ -0.37
TRIM56-204ENST00000487252 A0A0A0MRY4 1105 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 IGHV1OR15-9A0A0B4J2B8 117 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 LRRIQ4A6NIV6 560 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 OR6C75A6NL08 312 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 FLRT2O43155 660 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 SLC37A4O43826 429 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 SOAT2O75908 522 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 LYPLA2O95372 231 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 GP1BBP13224 206 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 KCNE1P15382 129 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 ATF6P18850 670 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 RCAN1P53805 252 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 YWHAHQ04917 246 aaPredicted RBP12.73□□□□□ -0.37
TRIM56-204ENST00000487252 LY6DQ14210 128 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 ZNF77Q15935 545 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 TRIML1Q8N9V2 468 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 FAM20AQ96MK3 541 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 HSPA12BQ96MM6 686 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 PNMA5Q96PV4 448 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 LPIN3Q9BQK8 851 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 IL21RQ9HBE5 538 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 DUS2Q9NX74 493 aaKnown RBP12.73□□□□□ -0.37
TRIM56-204ENST00000487252 ANKMY1Q9P2S6 941 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 NXF1Q9UBU9 619 aaKnown RBP12.73□□□□□ -0.37
TRIM56-204ENST00000487252 USP20Q9Y2K6 914 aa12.73□□□□□ -0.37
TRIM56-204ENST00000487252 MYO18AQ92614 2054 aaKnown RBP12.73□□□□□ -0.37
TRIM56-204ENST00000487252 USP9YO00507 2555 aaPredicted RBP12.73□□□□□ -0.37
TRIM56-204ENST00000487252 SGSM2O43147 1006 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 PRPF3O43395 683 aaKnown RBP12.72□□□□□ -0.37
TRIM56-204ENST00000487252 SLITRK3O94933 977 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 LARGE1O95461 756 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 KLF8O95600 359 aaPredicted RBP12.72□□□□□ -0.37
TRIM56-204ENST00000487252 F11P03951 625 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 MCM4P33991 863 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 KIR2DL1P43626 348 aaPredicted RBP12.72□□□□□ -0.37
TRIM56-204ENST00000487252 SEMG2Q02383 582 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 MYO1EQ12965 1108 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 CTTNQ14247 550 aaKnown RBP12.72□□□□□ -0.37
TRIM56-204ENST00000487252 MYBPC2Q14324 1141 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 MON1AQ86VX9 555 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 SFTPA1Q8IWL2 248 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 SPACA3Q8IXA5 215 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 RHBDD1Q8TEB9 315 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 RUFY2Q8WXA3 655 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 MED8Q96G25 268 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 DYDC2Q96IM9 177 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 GCNAQ96QF7 691 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 C22orf23Q9BZE7 217 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 NRSN2Q9GZP1 204 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 UPF2Q9HAU5 1272 aaKnown RBP12.72□□□□□ -0.37
TRIM56-204ENST00000487252 TM7SF3Q9NS93 570 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 ANKEF1Q9NU02 776 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 FNDC3AQ9Y2H6 1198 aaKnown RBP12.72□□□□□ -0.37
TRIM56-204ENST00000487252 CREBBPQ92793 2442 aa12.72□□□□□ -0.37
TRIM56-204ENST00000487252 TCRBV21S2A2A0A5A6 115 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 M0R2N6 131 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 TERTO14746 1132 aaKnown RBP12.71□□□□□ -0.37
TRIM56-204ENST00000487252 TNFSF14O43557 240 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 CILPO75339 1184 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms