RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 MCM6Q14566 821 aa20.98■□□□□ 0.95
SMPDL3A-202ENST00000487215 ZC2HC1CQ53FD0 456 aaPredicted RBP20.98■□□□□ 0.95
SMPDL3A-202ENST00000487215 TXNDC8Q6A555 127 aa20.98■□□□□ 0.95
SMPDL3A-202ENST00000487215 EFCAB13Q8IY85 973 aa20.98■□□□□ 0.95
SMPDL3A-202ENST00000487215 DCP1BQ8IZD4 617 aaKnown RBP20.98■□□□□ 0.95
SMPDL3A-202ENST00000487215 CAMKK1Q8N5S9 505 aa20.98■□□□□ 0.95
SMPDL3A-202ENST00000487215 STKLD1Q8NE28 680 aa20.98■□□□□ 0.95
SMPDL3A-202ENST00000487215 CALML4Q96GE6 196 aa20.98■□□□□ 0.95
SMPDL3A-202ENST00000487215 ZC3H10Q96K80 434 aaKnown RBP20.98■□□□□ 0.95
SMPDL3A-202ENST00000487215 HHIPQ96QV1 700 aa20.98■□□□□ 0.95
SMPDL3A-202ENST00000487215 TMLHEQ9NVH6 421 aa20.98■□□□□ 0.95
SMPDL3A-202ENST00000487215 PCDHB5Q9Y5E4 795 aa20.98■□□□□ 0.95
SMPDL3A-202ENST00000487215 SCN1AP35498 2009 aa20.98■□□□□ 0.95
SMPDL3A-202ENST00000487215 USP24Q9UPU5 2620 aa20.97■□□□□ 0.95
SMPDL3A-202ENST00000487215 TBCAO75347 108 aaKnown RBP20.97■□□□□ 0.95
SMPDL3A-202ENST00000487215 ABCD1P33897 745 aa20.97■□□□□ 0.95
SMPDL3A-202ENST00000487215 UBA7P41226 1012 aa20.97■□□□□ 0.95
SMPDL3A-202ENST00000487215 NAIF1Q69YI7 327 aaPredicted RBP20.97■□□□□ 0.95
SMPDL3A-202ENST00000487215 MRPS31Q92665 395 aaKnown RBP20.97■□□□□ 0.95
SMPDL3A-202ENST00000487215 RAD54LQ92698 747 aa20.97■□□□□ 0.95
SMPDL3A-202ENST00000487215 AGO2Q9UKV8 859 aaKnown RBP20.97■□□□□ 0.95
SMPDL3A-202ENST00000487215 STYXL1Q9Y6J8 313 aa20.97■□□□□ 0.95
SMPDL3A-202ENST00000487215 KPNA7A9QM74 516 aa20.96■□□□□ 0.95
SMPDL3A-202ENST00000487215 PLCG1P19174 1290 aa20.96■□□□□ 0.95
SMPDL3A-202ENST00000487215 DRD1P21728 446 aa20.96■□□□□ 0.95
SMPDL3A-202ENST00000487215 GALK1P51570 392 aa20.96■□□□□ 0.95
SMPDL3A-202ENST00000487215 SHC2P98077 582 aa20.96■□□□□ 0.95
SMPDL3A-202ENST00000487215 AMPD2Q01433 879 aa20.96■□□□□ 0.95
SMPDL3A-202ENST00000487215 PDGFRLQ15198 375 aa20.96■□□□□ 0.95
SMPDL3A-202ENST00000487215 SV2CQ496J9 727 aa20.96■□□□□ 0.95
SMPDL3A-202ENST00000487215 PLK5Q496M5 336 aa20.96■□□□□ 0.95
SMPDL3A-202ENST00000487215 SDHAF4Q5VUM1 108 aa20.96■□□□□ 0.95
SMPDL3A-202ENST00000487215 SLFN12LQ6IEE8 588 aa20.96■□□□□ 0.95
SMPDL3A-202ENST00000487215 CC2D1AQ6P1N0 951 aaPredicted RBP20.96■□□□□ 0.95
SMPDL3A-202ENST00000487215 MON1AQ86VX9 555 aa20.96■□□□□ 0.95
SMPDL3A-202ENST00000487215 PI4K2AQ9BTU6 479 aa20.96■□□□□ 0.95
SMPDL3A-202ENST00000487215 IKZF4Q9H2S9 585 aa20.96■□□□□ 0.95
SMPDL3A-202ENST00000487215 MAGED2Q9UNF1 606 aaPredicted RBP20.96■□□□□ 0.95
SMPDL3A-202ENST00000487215 SOBPA7XYQ1 873 aa20.95■□□□□ 0.94
SMPDL3A-202ENST00000487215 PRPF40AO75400 957 aaKnown RBP20.95■□□□□ 0.94
SMPDL3A-202ENST00000487215 TADA3O75528 432 aa20.95■□□□□ 0.94
SMPDL3A-202ENST00000487215 CSH1P0DML2 217 aa20.95■□□□□ 0.94
SMPDL3A-202ENST00000487215 CSH2P0DML3 217 aa20.95■□□□□ 0.94
SMPDL3A-202ENST00000487215 GJA4P35212 333 aa20.95■□□□□ 0.94
SMPDL3A-202ENST00000487215 ZNF268Q14587 947 aaPredicted RBP20.95■□□□□ 0.94
SMPDL3A-202ENST00000487215 KARSQ15046 597 aaKnown RBP20.95■□□□□ 0.94
SMPDL3A-202ENST00000487215 TCEAL6Q6IPX3 200 aa20.95■□□□□ 0.94
SMPDL3A-202ENST00000487215 CRELD2Q6UXH1 353 aaPredicted RBP20.95■□□□□ 0.94
SMPDL3A-202ENST00000487215 TCEAL3Q969E4 200 aa20.95■□□□□ 0.94
SMPDL3A-202ENST00000487215 ZNF560Q96MR9 790 aa20.95■□□□□ 0.94
SMPDL3A-202ENST00000487215 P2RY13Q9BPV8 354 aa20.95■□□□□ 0.94
SMPDL3A-202ENST00000487215 ST6GALNAC4Q9H4F1 302 aa20.95■□□□□ 0.94
SMPDL3A-202ENST00000487215 VPS45Q9NRW7 570 aa20.95■□□□□ 0.94
SMPDL3A-202ENST00000487215 TSPY1Q01534 308 aa20.94■□□□□ 0.94
SMPDL3A-202ENST00000487215 POU5F1Q01860 360 aaKnown RBP20.94■□□□□ 0.94
SMPDL3A-202ENST00000487215 GRIN1Q05586 938 aa20.94■□□□□ 0.94
SMPDL3A-202ENST00000487215 MTF1Q14872 753 aa20.94■□□□□ 0.94
SMPDL3A-202ENST00000487215 NFE2Q16621 373 aaPredicted RBP20.94■□□□□ 0.94
SMPDL3A-202ENST00000487215 FBXO43Q4G163 708 aa20.94■□□□□ 0.94
SMPDL3A-202ENST00000487215 RPLP0P6Q8NHW5 317 aa20.94■□□□□ 0.94
SMPDL3A-202ENST00000487215 LEO1Q8WVC0 666 aaPredicted RBP20.94■□□□□ 0.94
SMPDL3A-202ENST00000487215 EZH1Q92800 747 aaPredicted RBP20.94■□□□□ 0.94
SMPDL3A-202ENST00000487215 LSM14BQ9BX40 385 aaKnown RBP20.94■□□□□ 0.94
SMPDL3A-202ENST00000487215 DUSP15Q9H1R2 295 aaPredicted RBP20.94■□□□□ 0.94
SMPDL3A-202ENST00000487215 OBSL1O75147 1896 aa20.94■□□□□ 0.94
SMPDL3A-202ENST00000487215 DENND4CQ5VZ89 1909 aa20.94■□□□□ 0.94
SMPDL3A-202ENST00000487215 EML5Q05BV3 1969 aa20.94■□□□□ 0.94
SMPDL3A-202ENST00000487215 H3BQV1 296 aa20.93■□□□□ 0.94
SMPDL3A-202ENST00000487215 NOL4O94818 638 aa20.93■□□□□ 0.94
SMPDL3A-202ENST00000487215 KCNK5O95279 499 aa20.93■□□□□ 0.94
SMPDL3A-202ENST00000487215 FAM160A1Q05DH4 1040 aa20.93■□□□□ 0.94
SMPDL3A-202ENST00000487215 DDR2Q16832 855 aa20.93■□□□□ 0.94
SMPDL3A-202ENST00000487215 RNF43Q68DV7 783 aa20.93■□□□□ 0.94
SMPDL3A-202ENST00000487215 SYT13Q7L8C5 426 aa20.93■□□□□ 0.94
SMPDL3A-202ENST00000487215 NT5DC4Q86YG4 428 aa20.93■□□□□ 0.94
SMPDL3A-202ENST00000487215 PDCL2Q8N4E4 241 aa20.93■□□□□ 0.94
SMPDL3A-202ENST00000487215 CPA6Q8N4T0 437 aa20.93■□□□□ 0.94
SMPDL3A-202ENST00000487215 RASSF8Q8NHQ8 419 aa20.93■□□□□ 0.94
SMPDL3A-202ENST00000487215 LARP4BQ92615 738 aaKnown RBP20.93■□□□□ 0.94
SMPDL3A-202ENST00000487215 ECT2Q9H8V3 914 aa20.93■□□□□ 0.94
SMPDL3A-202ENST00000487215 TCHHQ07283 1943 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 SPAG17Q6Q759 2223 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 DCLK1O15075 740 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 IL18RAPO95256 599 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 APBB3O95704 486 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 GJB2P29033 226 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 ADSSP30520 456 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 PNPLA4P41247 253 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 WNT7BP56706 349 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 ELF2Q15723 593 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 ZNF77Q15935 545 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 OSCP1Q8WVF1 389 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 POMGNT1Q8WZA1 660 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 CD101Q93033 1021 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 EXOC4Q96A65 974 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 TRMT2BQ96GJ1 504 aaKnown RBP20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 SLC22A12Q96S37 553 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 TRPC7Q9HCX4 862 aa20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 DUS2Q9NX74 493 aaKnown RBP20.92■□□□□ 0.94
SMPDL3A-202ENST00000487215 UXTQ9UBK9 157 aaPredicted RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms