RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 GCNAQ96QF7 691 aa16.15■□□□□ 0.18
PFDN4-204ENST00000487129 KIF9Q9HAQ2 790 aa16.15■□□□□ 0.18
PFDN4-204ENST00000487129 ZMYM5Q9UJ78 669 aa16.15■□□□□ 0.18
PFDN4-204ENST00000487129 LHX6Q9UPM6 363 aa16.15■□□□□ 0.18
PFDN4-204ENST00000487129 DNM3Q9UQ16 869 aa16.15■□□□□ 0.18
PFDN4-204ENST00000487129 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.15■□□□□ 0.18
PFDN4-204ENST00000487129 SOBPA7XYQ1 873 aa16.14■□□□□ 0.17
PFDN4-204ENST00000487129 HYAL3O43820 417 aaPredicted RBP16.14■□□□□ 0.17
PFDN4-204ENST00000487129 GBP1P32455 592 aa16.14■□□□□ 0.17
PFDN4-204ENST00000487129 AVPR1AP37288 418 aa16.14■□□□□ 0.17
PFDN4-204ENST00000487129 PPP2R3AQ06190 1150 aa16.14■□□□□ 0.17
PFDN4-204ENST00000487129 RAD51AP2Q09MP3 1159 aa16.14■□□□□ 0.17
PFDN4-204ENST00000487129 ZNF268Q14587 947 aaPredicted RBP16.14■□□□□ 0.17
PFDN4-204ENST00000487129 PDGFRLQ15198 375 aa16.14■□□□□ 0.17
PFDN4-204ENST00000487129 KIAA1211LQ6NV74 962 aa16.14■□□□□ 0.17
PFDN4-204ENST00000487129 TIPINQ9BVW5 301 aa16.14■□□□□ 0.17
PFDN4-204ENST00000487129 TPSD1Q9BZJ3 242 aa16.14■□□□□ 0.17
PFDN4-204ENST00000487129 FOXP1Q9H334 677 aaPredicted RBP16.14■□□□□ 0.17
PFDN4-204ENST00000487129 ECT2Q9H8V3 914 aa16.14■□□□□ 0.17
PFDN4-204ENST00000487129 NEUROG3Q9Y4Z2 214 aa16.14■□□□□ 0.17
PFDN4-204ENST00000487129 TAF4O00268 1085 aa16.13■□□□□ 0.17
PFDN4-204ENST00000487129 NFICP08651 508 aa16.13■□□□□ 0.17
PFDN4-204ENST00000487129 DDX6P26196 483 aaKnown RBP eCLIP16.13■□□□□ 0.17
PFDN4-204ENST00000487129 GPR15P49685 360 aa16.13■□□□□ 0.17
PFDN4-204ENST00000487129 TOB1P50616 345 aaPredicted RBP16.13■□□□□ 0.17
PFDN4-204ENST00000487129 DGKEP52429 567 aa16.13■□□□□ 0.17
PFDN4-204ENST00000487129 BFSP1Q12934 665 aa16.13■□□□□ 0.17
PFDN4-204ENST00000487129 ZNF77Q15935 545 aa16.13■□□□□ 0.17
PFDN4-204ENST00000487129 JADE1Q6IE81 842 aa16.13■□□□□ 0.17
PFDN4-204ENST00000487129 MON1AQ86VX9 555 aa16.13■□□□□ 0.17
PFDN4-204ENST00000487129 CD101Q93033 1021 aa16.13■□□□□ 0.17
PFDN4-204ENST00000487129 ACDQ96AP0 544 aa16.13■□□□□ 0.17
PFDN4-204ENST00000487129 SLC22A12Q96S37 553 aa16.13■□□□□ 0.17
PFDN4-204ENST00000487129 TMLHEQ9NVH6 421 aa16.13■□□□□ 0.17
PFDN4-204ENST00000487129 EVLQ9UI08 416 aaPredicted RBP16.13■□□□□ 0.17
PFDN4-204ENST00000487129 KLK13Q9UKR3 277 aa16.13■□□□□ 0.17
PFDN4-204ENST00000487129 PTPRDP23468 1912 aa16.13■□□□□ 0.17
PFDN4-204ENST00000487129 LAMA5O15230 3695 aa16.13■□□□□ 0.17
PFDN4-204ENST00000487129 SCN1AP35498 2009 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 XPOTO43592 962 aaKnown RBP16.12■□□□□ 0.17
PFDN4-204ENST00000487129 HNRNPLP14866 589 aaKnown RBP eCLIP16.12■□□□□ 0.17
PFDN4-204ENST00000487129 TRAPPC10P48553 1259 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 NCKAP1LP55160 1127 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 ANAPC15P60006 121 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 AMPD2Q01433 879 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 USP4Q13107 963 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 MTF1Q14872 753 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 GAB4Q2WGN9 574 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 EML3Q32P44 896 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 SLC39A4Q6P5W5 647 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 CYP2U1Q7Z449 544 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 PIP4P1Q86T03 277 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 MDGA1Q8NFP4 955 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 TSTD1Q8NFU3 115 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 OLIG1Q8TAK6 271 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 SPPL2BQ8TCT7 592 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 USP33Q8TEY7 942 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 C2orf15Q8WU43 125 aaKnown RBP16.12■□□□□ 0.17
PFDN4-204ENST00000487129 OSCP1Q8WVF1 389 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 CNOT6LQ96LI5 555 aaKnown RBP16.12■□□□□ 0.17
PFDN4-204ENST00000487129 TSPAN18Q96SJ8 248 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 CCSER1Q9C0I3 900 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 CPSF3Q9UKF6 684 aaKnown RBP16.12■□□□□ 0.17
PFDN4-204ENST00000487129 MSRB2Q9Y3D2 182 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 PCNX2A6NKB5 2137 aa16.12■□□□□ 0.17
PFDN4-204ENST00000487129 THADAQ6YHU6 1953 aa16.11■□□□□ 0.17
PFDN4-204ENST00000487129 TNRC6BQ9UPQ9 1833 aaKnown RBP16.11■□□□□ 0.17
PFDN4-204ENST00000487129 A0A0B4J269 797 aa16.11■□□□□ 0.17
PFDN4-204ENST00000487129 K7EQS6 105 aa16.11■□□□□ 0.17
PFDN4-204ENST00000487129 OGTO15294 1046 aa16.11■□□□□ 0.17
PFDN4-204ENST00000487129 PIGRP01833 764 aa16.11■□□□□ 0.17
PFDN4-204ENST00000487129 CENPBP07199 599 aaPredicted RBP16.11■□□□□ 0.17
PFDN4-204ENST00000487129 PAX3P23760 479 aa16.11■□□□□ 0.17
PFDN4-204ENST00000487129 SAFBQ15424 915 aaKnown RBP eCLIP16.11■□□□□ 0.17
PFDN4-204ENST00000487129 USP39Q53GS9 565 aaKnown RBP16.11■□□□□ 0.17
PFDN4-204ENST00000487129 HYIQ5T013 277 aa16.11■□□□□ 0.17
PFDN4-204ENST00000487129 WSCD1Q658N2 575 aa16.11■□□□□ 0.17
PFDN4-204ENST00000487129 CPA6Q8N4T0 437 aa16.11■□□□□ 0.17
PFDN4-204ENST00000487129 PNMA5Q96PV4 448 aa16.11■□□□□ 0.17
PFDN4-204ENST00000487129 ABI2Q9NYB9 513 aaPredicted RBP16.11■□□□□ 0.17
PFDN4-204ENST00000487129 WNT6Q9Y6F9 365 aa16.11■□□□□ 0.17
PFDN4-204ENST00000487129 SMG1Q96Q15 3661 aaKnown RBP16.11■□□□□ 0.17
PFDN4-204ENST00000487129 OPRD1P41143 372 aa16.1■□□□□ 0.17
PFDN4-204ENST00000487129 SLC12A3P55017 1021 aa16.1■□□□□ 0.17
PFDN4-204ENST00000487129 FAM160A1Q05DH4 1040 aa16.1■□□□□ 0.17
PFDN4-204ENST00000487129 SMARCB1Q12824 385 aa16.1■□□□□ 0.17
PFDN4-204ENST00000487129 UAP1L1Q3KQV9 507 aa16.1■□□□□ 0.17
PFDN4-204ENST00000487129 SDHAF4Q5VUM1 108 aa16.1■□□□□ 0.17
PFDN4-204ENST00000487129 KRT79Q5XKE5 535 aa16.1■□□□□ 0.17
PFDN4-204ENST00000487129 ANO7Q6IWH7 933 aa16.1■□□□□ 0.17
PFDN4-204ENST00000487129 CC2D1AQ6P1N0 951 aaPredicted RBP16.1■□□□□ 0.17
PFDN4-204ENST00000487129 C11orf74Q86VG3 221 aa16.1■□□□□ 0.17
PFDN4-204ENST00000487129 SYT2Q8N9I0 419 aaPredicted RBP16.1■□□□□ 0.17
PFDN4-204ENST00000487129 FBXO18Q8NFZ0 1043 aa16.1■□□□□ 0.17
PFDN4-204ENST00000487129 C8orf76Q96K31 380 aa16.1■□□□□ 0.17
PFDN4-204ENST00000487129 FNBP1Q96RU3 617 aa16.1■□□□□ 0.17
PFDN4-204ENST00000487129 CYP2S1Q96SQ9 504 aa16.1■□□□□ 0.17
PFDN4-204ENST00000487129 RPF1Q9H9Y2 349 aaKnown RBP16.1■□□□□ 0.17
PFDN4-204ENST00000487129 TMEM74BQ9NUR3 256 aa16.1■□□□□ 0.17
PFDN4-204ENST00000487129 DUS2Q9NX74 493 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms