RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 SAE1Q9UBE0 346 aaPredicted RBP12.99□□□□□ -0.33
PTCD2-204ENST00000486995 NXF1Q9UBU9 619 aaKnown RBP12.99□□□□□ -0.33
PTCD2-204ENST00000486995 PRKAG3Q9UGI9 489 aa12.99□□□□□ -0.33
PTCD2-204ENST00000486995 GGT7Q9UJ14 662 aa12.99□□□□□ -0.33
PTCD2-204ENST00000486995 AGAP1Q9UPQ3 857 aa12.99□□□□□ -0.33
PTCD2-204ENST00000486995 CEP83Q9Y592 693 aa12.99□□□□□ -0.33
PTCD2-204ENST00000486995 SIGLEC16A6NMB1 481 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 GOLGA8SH3BPF8 625 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 SUN1O94901 812 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 TNNC2P02585 160 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 KRT3P12035 628 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 PSMA2P25787 234 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 PSMC4P43686 418 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 RAP1GAPP47736 663 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 WDR4P57081 412 aaKnown RBP12.98□□□□□ -0.33
PTCD2-204ENST00000486995 LACTBP83111 547 aaPredicted RBP12.98□□□□□ -0.33
PTCD2-204ENST00000486995 PLCB3Q01970 1234 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 GALNTL6Q49A17 601 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 CELF3Q5SZQ8 465 aaKnown RBP12.98□□□□□ -0.33
PTCD2-204ENST00000486995 EEF1DP3Q658K8 133 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 CGB2Q6NT52 195 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 TRABD2AQ86V40 505 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 FAM228AQ86W67 206 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 TDRPQ86YL5 185 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 TMEM192Q8IY95 271 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 TRAPPC12Q8WVT3 735 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 FGD4Q96M96 766 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 PCDH9Q9HC56 1237 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 STRIP2Q9ULQ0 834 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 SGK1O00141 431 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 CHUKO15111 745 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 MGRN1O60291 552 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 LRCH4O75427 683 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 CNMDO75829 334 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 UBOX5O94941 541 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 IFNB1P01574 187 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 PGK2P07205 417 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 FOXN2P32314 431 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 YWHAEP62258 255 aaKnown RBP12.98□□□□□ -0.33
PTCD2-204ENST00000486995 ELF3P78545 371 aaPredicted RBP12.98□□□□□ -0.33
PTCD2-204ENST00000486995 PPP1R21Q6ZMI0 780 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 SPATA21Q7Z572 469 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 TMEM130Q8N3G9 435 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 PRCCQ92733 491 aaPredicted RBP12.98□□□□□ -0.33
PTCD2-204ENST00000486995 ZBTB10Q96DT7 871 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 ANKRD36BP1Q96IX9 119 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 SIX4Q9UIU6 781 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 EFR3BQ9Y2G0 817 aa12.98□□□□□ -0.33
PTCD2-204ENST00000486995 FAM47DPA6NHR8 397 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 INO80B-WBP1J3KQ70 363 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 CD19P15391 556 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 TAC1P20366 129 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 CDH8P55286 799 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 MKRN3Q13064 507 aaKnown RBP12.97□□□□□ -0.33
PTCD2-204ENST00000486995 ZKSCAN8Q15776 578 aaPredicted RBP12.97□□□□□ -0.33
PTCD2-204ENST00000486995 SMTNL2Q2TAL5 461 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 KCNT1Q5JUK3 1230 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 GADL1Q6ZQY3 521 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 EXOC8Q8IYI6 725 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 ZBED8Q8IZ13 594 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 NLRP4Q96MN2 994 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 BCO2Q9BYV7 579 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 INO80BQ9C086 356 aaPredicted RBP12.97□□□□□ -0.33
PTCD2-204ENST00000486995 C10orf88Q9H8K7 445 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 MINDY3Q9H8M7 445 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 ZWILCHQ9H900 591 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 SHOC2Q9UQ13 582 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 ARL2BPQ9Y2Y0 163 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 FARP1Q9Y4F1 1045 aaPredicted RBP12.97□□□□□ -0.33
PTCD2-204ENST00000486995 POC1B-GALNT4F8VUJ3 575 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 NOP56O00567 594 aaKnown RBP12.97□□□□□ -0.33
PTCD2-204ENST00000486995 IQCF3P0C7M6 154 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 CXCL8P10145 99 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 POLR2BP30876 1174 aaKnown RBP12.97□□□□□ -0.33
PTCD2-204ENST00000486995 RAD23BP54727 409 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 GDF10P55107 478 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 PSMC1P62191 440 aaKnown RBP12.97□□□□□ -0.33
PTCD2-204ENST00000486995 DYNLT1P63172 113 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 OTUD4Q01804 1114 aaKnown RBP12.97□□□□□ -0.33
PTCD2-204ENST00000486995 NR1H3Q13133 447 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 SNCBQ16143 134 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 SMYD5Q6GMV2 418 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 ACTL9Q8TC94 416 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 DENND1AQ8TEH3 1009 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 FNIP1Q8TF40 1166 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 CPXM1Q96SM3 734 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 SDCBP2Q9H190 292 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 A0A0G2JMZ2 1700 aa12.97□□□□□ -0.33
PTCD2-204ENST00000486995 SPAG7O75391 227 aa12.96□□□□□ -0.33
PTCD2-204ENST00000486995 ASMTLO95671 621 aa12.96□□□□□ -0.33
PTCD2-204ENST00000486995 KRT19P08727 400 aa12.96□□□□□ -0.33
PTCD2-204ENST00000486995 MBTD1Q05BQ5 628 aa12.96□□□□□ -0.33
PTCD2-204ENST00000486995 PDIA2Q13087 525 aaKnown RBP12.96□□□□□ -0.33
PTCD2-204ENST00000486995 ORC1Q13415 861 aa12.96□□□□□ -0.33
PTCD2-204ENST00000486995 MTFR1Q15390 333 aa12.96□□□□□ -0.33
PTCD2-204ENST00000486995 PKN2Q16513 984 aaKnown RBP12.96□□□□□ -0.33
PTCD2-204ENST00000486995 TAZQ16635 292 aa12.96□□□□□ -0.33
PTCD2-204ENST00000486995 CAPN12Q6ZSI9 719 aa12.96□□□□□ -0.33
PTCD2-204ENST00000486995 CENPUQ71F23 418 aa12.96□□□□□ -0.33
PTCD2-204ENST00000486995 EMC1Q8N766 993 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms