RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 CHFRQ96EP1 664 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 CPB2Q96IY4 423 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 P2RY13Q9BPV8 354 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 SH2D3AQ9BRG2 576 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 SEMA4CQ9C0C4 833 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 SCAND2PQ9GZW5 306 aaPredicted RBP9.19□□□□□ -0.94
APTX-228ENST00000486724 GLT8D2Q9H1C3 349 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 IL17BQ9UHF5 180 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 USP25Q9UHP3 1055 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 PCOLCE2Q9UKZ9 415 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 CFAP45Q9UL16 551 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 PAXBP1Q9Y5B6 917 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 FBN2P35556 2912 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 ARID2Q68CP9 1835 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 MYO16Q9Y6X6 1858 aa9.19□□□□□ -0.94
APTX-228ENST00000486724 BOD1L1Q8NFC6 3051 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 DKK1O94907 266 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 YEATS4O95619 227 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 CCR10P46092 362 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 CLK2P49760 499 aaKnown RBP9.18□□□□□ -0.94
APTX-228ENST00000486724 JAK3P52333 1124 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 ARPP19P56211 112 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 RHDQ02161 417 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 LAMTOR4Q0VGL1 99 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 PSMD2Q13200 908 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 RUNX3Q13761 415 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 STXBP5Q5T5C0 1151 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 TPGS2Q68CL5 300 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 PRICKLE2Q7Z3G6 844 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 REXO1Q8N1G1 1221 aaKnown RBP9.18□□□□□ -0.94
APTX-228ENST00000486724 CCDC26Q8TAB7 109 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 PRPF31Q8WWY3 499 aaKnown RBP9.18□□□□□ -0.94
APTX-228ENST00000486724 PSPC1Q8WXF1 523 aaKnown RBP9.18□□□□□ -0.94
APTX-228ENST00000486724 SLC7A3Q8WY07 619 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 USP28Q96RU2 1077 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 FBRSL1Q9HCM7 1045 aaKnown RBP9.18□□□□□ -0.94
APTX-228ENST00000486724 ANKMY1Q9P2S6 941 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 PARP2Q9UGN5 583 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 SRPK3Q9UPE1 567 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 PLXND1Q9Y4D7 1925 aa9.18□□□□□ -0.94
APTX-228ENST00000486724 PTPRDP23468 1912 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 FAM149AA5PLN7 773 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 SMTNL1A8MU46 457 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 VGLL3A8MV65 326 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 TMEM189-UBE2V1I3L0A0 370 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 ADAMTS3O15072 1205 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 AP5Z1O43299 807 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 TRAPPC3O43617 180 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 CHMP2AO43633 222 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 TLX3O43711 291 aaPredicted RBP9.17□□□□□ -0.94
APTX-228ENST00000486724 B3GAT3O94766 335 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 ALDH1A2O94788 518 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 PRAMEF12O95522 483 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 THP07101 528 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 CYP3A4P08684 503 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 TRAPPC10P48553 1259 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 GALK1P51570 392 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 BYSLQ13895 437 aaKnown RBP9.17□□□□□ -0.94
APTX-228ENST00000486724 C2orf27AQ580R0 203 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 SLC27A1Q6PCB7 646 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 TTC30AQ86WT1 665 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 ZNF513Q8N8E2 541 aaPredicted RBP9.17□□□□□ -0.94
APTX-228ENST00000486724 RNF149Q8NC42 400 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 WHAMMQ8TF30 809 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 LEO1Q8WVC0 666 aaPredicted RBP9.17□□□□□ -0.94
APTX-228ENST00000486724 RLN3Q8WXF3 142 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 CRYGNQ8WXF5 182 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 SPATA32Q96LK8 384 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 HPS4Q9NQG7 708 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 GKN1Q9NS71 199 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 TOR4AQ9NXH8 423 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 SSUH2Q9Y2M2 353 aa9.17□□□□□ -0.94
APTX-228ENST00000486724 GOLGA4Q13439 2230 aaKnown RBP9.16□□□□□ -0.94
APTX-228ENST00000486724 OTOL1A6NHN0 477 aaPredicted RBP9.16□□□□□ -0.94
APTX-228ENST00000486724 PTGESO14684 152 aa9.16□□□□□ -0.94
APTX-228ENST00000486724 STBD1O95210 358 aa9.16□□□□□ -0.94
APTX-228ENST00000486724 NPTXRO95502 500 aa9.16□□□□□ -0.94
APTX-228ENST00000486724 TOB1P50616 345 aaPredicted RBP9.16□□□□□ -0.94
APTX-228ENST00000486724 RIPPLY3P57055 190 aa9.16□□□□□ -0.94
APTX-228ENST00000486724 SEMG2Q02383 582 aa9.16□□□□□ -0.94
APTX-228ENST00000486724 TLE3Q04726 772 aa9.16□□□□□ -0.94
APTX-228ENST00000486724 LY6DQ14210 128 aa9.16□□□□□ -0.94
APTX-228ENST00000486724 NAB2Q15742 525 aa9.16□□□□□ -0.94
APTX-228ENST00000486724 SMAD1Q15797 465 aaKnown RBP9.16□□□□□ -0.94
APTX-228ENST00000486724 PREPLQ4J6C6 727 aaPredicted RBP9.16□□□□□ -0.94
APTX-228ENST00000486724 PRR16Q569H4 304 aa9.16□□□□□ -0.94
APTX-228ENST00000486724 EARS2Q5JPH6 523 aaKnown RBP9.16□□□□□ -0.94
APTX-228ENST00000486724 PIK3AP1Q6ZUJ8 805 aa9.16□□□□□ -0.94
APTX-228ENST00000486724 TMC8Q8IU68 726 aa9.16□□□□□ -0.94
APTX-228ENST00000486724 LINC00301Q8NCQ3 95 aa9.16□□□□□ -0.94
APTX-228ENST00000486724 SNIP1Q8TAD8 396 aaKnown RBP9.16□□□□□ -0.94
APTX-228ENST00000486724 SETD7Q8WTS6 366 aaKnown RBP9.16□□□□□ -0.94
APTX-228ENST00000486724 EZH1Q92800 747 aaPredicted RBP9.16□□□□□ -0.94
APTX-228ENST00000486724 FAM83CQ9BQN1 747 aa9.16□□□□□ -0.94
APTX-228ENST00000486724 POLR3CQ9BUI4 534 aaPredicted RBP9.16□□□□□ -0.94
APTX-228ENST00000486724 EBF3Q9H4W6 596 aa9.16□□□□□ -0.94
APTX-228ENST00000486724 GDPD2Q9HCC8 539 aa9.16□□□□□ -0.94
APTX-228ENST00000486724 TFIP11Q9UBB9 837 aaKnown RBP9.16□□□□□ -0.94
APTX-228ENST00000486724 RCOR1Q9UKL0 485 aa9.16□□□□□ -0.94
APTX-228ENST00000486724 MAFFQ9ULX9 164 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms