RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ARHGEF25Q86VW2 580 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 EXOC8Q8IYI6 725 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 NLGN4YQ8NFZ3 816 aaPredicted RBP5.61□□□□□ -1.51
SMC4-218ENST00000486711 NUP133Q8WUM0 1156 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 TNPO1Q92973 898 aaKnown RBP5.61□□□□□ -1.51
SMC4-218ENST00000486711 GJA10Q969M2 543 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 SLC39A13Q96H72 371 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 PDLIM2Q96JY6 352 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 MED15Q96RN5 788 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 PNKPQ96T60 521 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 TBCBQ99426 244 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 MYOCQ99972 504 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 HEPHQ9BQS7 1158 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 INO80BQ9C086 356 aaPredicted RBP5.61□□□□□ -1.51
SMC4-218ENST00000486711 ZNF287Q9HBT7 754 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 SLAMF7Q9NQ25 335 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 SLC17A6Q9P2U8 582 aa5.61□□□□□ -1.51
SMC4-218ENST00000486711 NT5C1B-RDH14C9J2C7 533 aa5.6□□□□□ -1.51
SMC4-218ENST00000486711 MGST3O14880 152 aa5.6□□□□□ -1.51
SMC4-218ENST00000486711 BRAFP15056 766 aa5.6□□□□□ -1.51
SMC4-218ENST00000486711 HTR3AP46098 478 aa5.6□□□□□ -1.51
SMC4-218ENST00000486711 KCNJ5P48544 419 aa5.6□□□□□ -1.51
SMC4-218ENST00000486711 DACT2Q5SW24 774 aa5.6□□□□□ -1.51
SMC4-218ENST00000486711 COL23A1Q86Y22 540 aaPredicted RBP5.6□□□□□ -1.51
SMC4-218ENST00000486711 FAM90A1Q86YD7 464 aa5.6□□□□□ -1.51
SMC4-218ENST00000486711 LNX2Q8N448 690 aa5.6□□□□□ -1.51
SMC4-218ENST00000486711 DCBLD1Q8N8Z6 715 aa5.6□□□□□ -1.51
SMC4-218ENST00000486711 IL31RAQ8NI17 732 aa5.6□□□□□ -1.51
SMC4-218ENST00000486711 ZNF384Q8TF68 577 aa5.6□□□□□ -1.51
SMC4-218ENST00000486711 PHKBQ93100 1093 aa5.6□□□□□ -1.51
SMC4-218ENST00000486711 MARS2Q96GW9 593 aaKnown RBP5.6□□□□□ -1.51
SMC4-218ENST00000486711 SUCLG2Q96I99 432 aa5.6□□□□□ -1.51
SMC4-218ENST00000486711 CCDC138Q96M89 665 aa5.6□□□□□ -1.51
SMC4-218ENST00000486711 MRPL46Q9H2W6 279 aaKnown RBP5.6□□□□□ -1.51
SMC4-218ENST00000486711 ATP6V0A4Q9HBG4 840 aa5.6□□□□□ -1.51
SMC4-218ENST00000486711 ZDHHC8Q9ULC8 765 aa5.6□□□□□ -1.51
SMC4-218ENST00000486711 FRMD4BQ9Y2L6 1034 aa5.6□□□□□ -1.51
SMC4-218ENST00000486711 ISM1B1AKI9 464 aa5.59□□□□□ -1.51
SMC4-218ENST00000486711 MATN4O95460 622 aa5.59□□□□□ -1.51
SMC4-218ENST00000486711 SOX8P57073 446 aa5.59□□□□□ -1.51
SMC4-218ENST00000486711 CCDC93Q567U6 631 aa5.59□□□□□ -1.51
SMC4-218ENST00000486711 PPP1R3BQ86XI6 285 aa5.59□□□□□ -1.51
SMC4-218ENST00000486711 SPICE1Q8N0Z3 855 aa5.59□□□□□ -1.51
SMC4-218ENST00000486711 IL17RDQ8NFM7 739 aa5.59□□□□□ -1.51
SMC4-218ENST00000486711 ANKS1AQ92625 1134 aa5.59□□□□□ -1.51
SMC4-218ENST00000486711 C1orf43Q9BWL3 253 aa5.59□□□□□ -1.51
SMC4-218ENST00000486711 BRD9Q9H8M2 597 aa5.59□□□□□ -1.51
SMC4-218ENST00000486711 CFAP97Q9P2B7 532 aa5.59□□□□□ -1.51
SMC4-218ENST00000486711 CORO2BQ9UQ03 480 aa5.59□□□□□ -1.51
SMC4-218ENST00000486711 DAAM1Q9Y4D1 1078 aa5.59□□□□□ -1.51
SMC4-218ENST00000486711 TRGV11A0A075B6L2 103 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 TCRBV7S2A1N4TA0A589 114 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 PEX1O43933 1283 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 PROP1O75360 226 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 HAUS5O94927 633 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 AHSGP02765 367 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 GNAI2P04899 355 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 ZKSCAN1P17029 563 aaPredicted RBP5.58□□□□□ -1.52
SMC4-218ENST00000486711 TM4SF4P48230 202 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 ALDH5A1P51649 535 aaPredicted RBP5.58□□□□□ -1.52
SMC4-218ENST00000486711 NOMO3P69849 1222 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 BTKQ06187 659 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 HABP2Q14520 560 aaPredicted RBP5.58□□□□□ -1.52
SMC4-218ENST00000486711 CNGA2Q16280 664 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 GEN1Q17RS7 908 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 NOMO2Q5JPE7 1267 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 SP5Q6BEB4 398 aaPredicted RBP5.58□□□□□ -1.52
SMC4-218ENST00000486711 TOGARAM2Q6ZUX3 1019 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 DPP9Q86TI2 863 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 SMC5Q8IY18 1101 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 OR6B3Q8NGW1 331 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 SSH3Q8TE77 659 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 GSTO2Q9H4Y5 243 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 PNPLA8Q9NP80 782 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 RLIMQ9NVW2 624 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 HSFX1Q9UBD0 423 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 TAGLN3Q9UI15 199 aa5.58□□□□□ -1.52
SMC4-218ENST00000486711 SETD1BQ9UPS6 1966 aaKnown RBP5.58□□□□□ -1.52
SMC4-218ENST00000486711 CDHR4A6H8M9 788 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 RASA4BC9J798 803 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 RASA4O43374 803 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 ORC4O43929 436 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 TBC1D4O60343 1298 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 RBMXL2O75526 392 aaKnown RBP5.57□□□□□ -1.52
SMC4-218ENST00000486711 C1QL1O75973 258 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 SBK3P0C264 359 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 NPR1P16066 1061 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 PIK3CBP42338 1070 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 SUMO3P55854 103 aaPredicted RBP5.57□□□□□ -1.52
SMC4-218ENST00000486711 EXOSC9Q06265 439 aaKnown RBP5.57□□□□□ -1.52
SMC4-218ENST00000486711 SLC44A4Q53GD3 710 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 C10orf62Q5T681 223 aaPredicted RBP5.57□□□□□ -1.52
SMC4-218ENST00000486711 EMC10Q5UCC4 262 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 ZNF783Q6ZMS7 281 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 TBC1D15Q8TC07 691 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 KBTBD7Q8WVZ9 684 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 MRGPRX1Q96LB2 322 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 UNKQ9C0B0 810 aaKnown RBP5.57□□□□□ -1.52
SMC4-218ENST00000486711 KLK15Q9H2R5 256 aa5.57□□□□□ -1.52
SMC4-218ENST00000486711 PLCB1Q9NQ66 1216 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms