RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 MORF4L2Q15014 288 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 RNASEH2BQ5TBB1 312 aaKnown RBP11.17□□□□□ -0.62
CCDC171-208ENST00000486641 AAGABQ6PD74 315 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 STXBP4Q6ZWJ1 553 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 PRPF39Q86UA1 669 aaKnown RBP11.17□□□□□ -0.62
CCDC171-208ENST00000486641 CHSY1Q86X52 802 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 DCAKDQ8WVC6 231 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 ALKBH8Q96BT7 664 aaKnown RBP11.17□□□□□ -0.62
CCDC171-208ENST00000486641 DHRS4Q9BTZ2 278 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 BTBD19C9JJ37 291 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 TXNDC9O14530 226 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 MAGEB3O15480 346 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 TFAP2AP05549 437 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 HNRNPCP07910 306 aaKnown RBP eCLIP11.17□□□□□ -0.62
CCDC171-208ENST00000486641 PEX2P28328 305 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 HIRAP54198 1017 aaPredicted RBP11.17□□□□□ -0.62
CCDC171-208ENST00000486641 RHBDL3P58872 404 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 SULT2A1Q06520 285 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 ITPK1Q13572 414 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 MTMR2Q13614 643 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 DNAL1Q4LDG9 190 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 KAZNQ674X7 775 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 KYAT3Q6YP21 454 aaKnown RBP11.17□□□□□ -0.62
CCDC171-208ENST00000486641 C3orf62Q6ZUJ4 267 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 MCOLN2Q8IZK6 566 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 CCDC24Q8N4L8 307 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 GDPD5Q8WTR4 605 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 SNRNP27Q8WVK2 155 aaKnown RBP11.17□□□□□ -0.62
CCDC171-208ENST00000486641 CPA5Q8WXQ8 436 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 IRGQQ8WZA9 623 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 DHX38Q92620 1227 aaKnown RBP11.17□□□□□ -0.62
CCDC171-208ENST00000486641 RPGRQ92834 1020 aaKnown RBP11.17□□□□□ -0.62
CCDC171-208ENST00000486641 CCDC106Q9BWC9 280 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 STRA6Q9BX79 667 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 GLT8D2Q9H1C3 349 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 SEL1LQ9UBV2 794 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 STRIP2Q9ULQ0 834 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 POLIQ9UNA4 740 aa11.17□□□□□ -0.62
CCDC171-208ENST00000486641 ATP2A1O14983 1001 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 AP1G1O43747 822 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 PROSCO94903 275 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 GLRA2P23416 452 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 MXI1P50539 228 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 GALK1P51570 392 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 EMP3P54852 163 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 PLOD1Q02809 727 aaPredicted RBP11.16□□□□□ -0.62
CCDC171-208ENST00000486641 TMED1Q13445 227 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 ANKRD20A4Q4UJ75 823 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 MSS51Q4VC12 460 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 ATP13A4Q4VNC1 1196 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 FNBP1LQ5T0N5 605 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 GPATCH4Q5T3I0 446 aaKnown RBP11.16□□□□□ -0.62
CCDC171-208ENST00000486641 ISLR2Q6UXK2 745 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 RHOT1Q8IXI2 618 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 OGFOD1Q8N543 542 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 ALLCQ8N6M5 410 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 METTL25Q8N6Q8 603 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 SERAC1Q96JX3 654 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 CBWD1Q9BRT8 395 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 C17orf75Q9HAS0 396 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 KLHL11Q9NVR0 708 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 KCNK4Q9NYG8 393 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 CNTN3Q9P232 1028 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 ZNF652Q9Y2D9 606 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 MYH14Q7Z406 1995 aaKnown RBP11.16□□□□□ -0.62
CCDC171-208ENST00000486641 PLIN4Q96Q06 1357 aa11.16□□□□□ -0.62
CCDC171-208ENST00000486641 CCDC160A6NGH7 325 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 MEI4A8MW99 385 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 PRR5-ARHGAP8B1AHC4 643 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 PI4K2BG5E9Z4 385 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 CHMP2AO43633 222 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 SORBS2O94875 1100 aaKnown RBP11.15□□□□□ -0.62
CCDC171-208ENST00000486641 MT-ND3P03897 115 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 UNGP13051 313 aaPredicted RBP11.15□□□□□ -0.62
CCDC171-208ENST00000486641 STIP1P31948 543 aaKnown RBP11.15□□□□□ -0.62
CCDC171-208ENST00000486641 CPOXP36551 454 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 RPL5P46777 297 aaKnown RBP11.15□□□□□ -0.62
CCDC171-208ENST00000486641 ALDH18A1P54886 795 aaKnown RBP11.15□□□□□ -0.62
CCDC171-208ENST00000486641 ARHGAP8P85298 464 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 FOLH1Q04609 750 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 AP3B2Q13367 1082 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 CYLC2Q14093 348 aaPredicted RBP11.15□□□□□ -0.62
CCDC171-208ENST00000486641 EAPPQ56P03 285 aaPredicted RBP11.15□□□□□ -0.62
CCDC171-208ENST00000486641 C1orf228Q6PIY5 440 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 ZNF554Q86TJ5 538 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 MAP7D3Q8IWC1 876 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 KATNAL2Q8IYT4 538 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 HELQQ8TDG4 1101 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 SLC26A7Q8TE54 656 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 PYROXD1Q8WU10 500 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 ZNF395Q9H8N7 513 aaPredicted RBP11.15□□□□□ -0.62
CCDC171-208ENST00000486641 FETUBQ9UGM5 382 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 USTQ9Y2C2 406 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 ROBO1Q9Y6N7 1651 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 C15orf38-AP3S2A0A0A6YYH1 394 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 TMEM221A6NGB7 291 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 ARHGAP42A6NI28 874 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 SPDYE16A6NNV3 312 aaPredicted RBP11.15□□□□□ -0.62
CCDC171-208ENST00000486641 PSTPIP1O43586 416 aa11.15□□□□□ -0.62
CCDC171-208ENST00000486641 IL1BP01584 269 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms