RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 LIN9Q5TKA1 542 aa14.07□□□□□ -0.16
VTI1BP1-201ENST00000486325 FUT10Q6P4F1 479 aa14.07□□□□□ -0.16
VTI1BP1-201ENST00000486325 KCNT2Q6UVM3 1135 aa14.07□□□□□ -0.16
VTI1BP1-201ENST00000486325 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.07□□□□□ -0.16
VTI1BP1-201ENST00000486325 OSTM1Q86WC4 334 aa14.07□□□□□ -0.16
VTI1BP1-201ENST00000486325 TNS4Q8IZW8 715 aa14.07□□□□□ -0.16
VTI1BP1-201ENST00000486325 FIBCD1Q8N539 461 aa14.07□□□□□ -0.16
VTI1BP1-201ENST00000486325 B3GALNT2Q8NCR0 500 aa14.07□□□□□ -0.16
VTI1BP1-201ENST00000486325 OLIG1Q8TAK6 271 aa14.07□□□□□ -0.16
VTI1BP1-201ENST00000486325 HASPINQ8TF76 798 aa14.07□□□□□ -0.16
VTI1BP1-201ENST00000486325 HNRNPABQ99729 332 aaKnown RBP14.07□□□□□ -0.16
VTI1BP1-201ENST00000486325 MYO1AQ9UBC5 1043 aa14.07□□□□□ -0.16
VTI1BP1-201ENST00000486325 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.07□□□□□ -0.16
VTI1BP1-201ENST00000486325 PCDHB12Q9Y5F1 795 aa14.07□□□□□ -0.16
VTI1BP1-201ENST00000486325 TIMM13Q9Y5L4 95 aaPredicted RBP14.07□□□□□ -0.16
VTI1BP1-201ENST00000486325 FNDC1Q4ZHG4 1894 aaPredicted RBP14.07□□□□□ -0.16
VTI1BP1-201ENST00000486325 A0A0A6YYK5 440 aaPredicted RBP14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 USP27XA6NNY8 438 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 I3L4J1 428 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 KIF5CO60282 957 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 MICAL2O94851 1124 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 CALCAP01258 141 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 CALB1P05937 261 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 ATP2A2P16615 1042 aaKnown RBP14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 FGFR3P22607 806 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 PPM1AP35813 382 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 NOMO3P69849 1222 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 C1QBPQ07021 282 aaKnown RBP14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 ORC1Q13415 861 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 PPP1R26Q5T8A7 1209 aaPredicted RBP14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 FAM171A1Q5VUB5 890 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 ERICH1Q86X53 443 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 PHF13Q86YI8 300 aaPredicted RBP14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 HERC6Q8IVU3 1022 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 DCP1BQ8IZD4 617 aaKnown RBP14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 C12orf29Q8N999 325 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 ANKRD52Q8NB46 1076 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 MYCBPAPQ8TBZ2 947 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 STK32AQ8WU08 396 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 CPA5Q8WXQ8 436 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 IGSF21Q96ID5 467 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 SYT15Q9BQS2 421 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 ZSWIM1Q9BR11 485 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 LZTFL1Q9NQ48 299 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 MARCH5Q9NX47 278 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 SPG21Q9NZD8 308 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 TSPAN16Q9UKR8 245 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 GUCA1BQ9UMX6 200 aa14.06□□□□□ -0.16
VTI1BP1-201ENST00000486325 OR6C75A6NL08 312 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 NT5C1B-RDH14C9J2C7 533 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 ARHGAP25P42331 645 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 PLCB3Q01970 1234 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 SMARCB1Q12824 385 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 MRPL58Q14197 206 aaKnown RBP14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 TCEAL1Q15170 157 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 USP41Q3LFD5 358 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 RASIP1Q5U651 963 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 NAA35Q5VZE5 725 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 FAM171BQ6P995 826 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 ANKS3Q6ZW76 656 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 PALB2Q86YC2 1186 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 RHOT2Q8IXI1 618 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 MCOLN2Q8IZK6 566 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 C17orf53Q8N3J3 647 aaPredicted RBP14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 UBE2Q2Q8WVN8 375 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 TMEM169Q96HH4 297 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 TTPALQ9BTX7 342 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 LACRTQ9GZZ8 138 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 DPEP3Q9H4B8 488 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 TAS2R14Q9NYV8 317 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 ADAM22Q9P0K1 906 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 CXXC1Q9P0U4 656 aaPredicted RBP14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 STRIP2Q9ULQ0 834 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 NME7Q9Y5B8 376 aa14.05□□□□□ -0.16
VTI1BP1-201ENST00000486325 RCCD1A6NED2 376 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 F8W810 466 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 M0QYV0 167 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 TLL1O43897 1013 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 CFHP08603 1231 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 MMP8P22894 467 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 ACAT1P24752 427 aaKnown RBP14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 TKTP29401 623 aaKnown RBP14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 GPD2P43304 727 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 BCAT1P54687 386 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 NAP1L1P55209 391 aaKnown RBP14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 KRT17Q04695 432 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 NFE2Q16621 373 aaPredicted RBP14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 GOLGA7BQ2TAP0 167 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 INTS6LQ5JSJ4 861 aaKnown RBP14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 VARS2Q5ST30 1063 aaKnown RBP14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 ZNF280DQ6N043 979 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 DENND1BQ6P3S1 775 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 C4orf50Q6ZRC1 276 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 CEP57Q86XR8 500 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 PASD1Q8IV76 773 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 GPR65Q8IYL9 337 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 SLC39A11Q8N1S5 342 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 COLGALT1Q8NBJ5 622 aa14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 SECISBP2LQ93073 1101 aaKnown RBP14.04□□□□□ -0.16
VTI1BP1-201ENST00000486325 MED10Q9BTT4 135 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms