RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 SLC9A9Q8IVB4 645 aa19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 ARID3BQ8IVW6 561 aaPredicted RBP19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 FSIP1Q8NA03 581 aa19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 PJA1Q8NG27 643 aa19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 KBTBD7Q8WVZ9 684 aa19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 IRF7Q92985 503 aa19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 MKNK1Q9BUB5 465 aa19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 OSBPL6Q9BZF3 934 aa19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 GZF1Q9H116 711 aaPredicted RBP19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 KCTD10Q9H3F6 313 aa19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 IL21Q9HBE4 155 aa19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 ABCB6Q9NP58 842 aa19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 TRPV5Q9NQA5 729 aa19.74■□□□□ 0.75
PRPF40A-209ENST00000486100 PDXKO00764 312 aa19.73■□□□□ 0.75
PRPF40A-209ENST00000486100 GDI1P31150 447 aa19.73■□□□□ 0.75
PRPF40A-209ENST00000486100 ANGPT1Q15389 498 aa19.73■□□□□ 0.75
PRPF40A-209ENST00000486100 GPR158Q5T848 1215 aa19.73■□□□□ 0.75
PRPF40A-209ENST00000486100 FAM171BQ6P995 826 aa19.73■□□□□ 0.75
PRPF40A-209ENST00000486100 KRBA2Q6ZNG9 492 aa19.73■□□□□ 0.75
PRPF40A-209ENST00000486100 CCDC47Q96A33 483 aaKnown RBP19.73■□□□□ 0.75
PRPF40A-209ENST00000486100 MMS19Q96T76 1030 aa19.73■□□□□ 0.75
PRPF40A-209ENST00000486100 NELL2Q99435 816 aa19.73■□□□□ 0.75
PRPF40A-209ENST00000486100 TASP1Q9H6P5 420 aa19.73■□□□□ 0.75
PRPF40A-209ENST00000486100 GDPD2Q9HCC8 539 aa19.73■□□□□ 0.75
PRPF40A-209ENST00000486100 HEBP1Q9NRV9 189 aa19.73■□□□□ 0.75
PRPF40A-209ENST00000486100 TSC2P49815 1807 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 MYBPHLA2RUH7 354 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 FAM170BA6NMN3 283 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 ZNF263O14978 683 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 HCRTO43612 131 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 RHOBTB3O94955 611 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 ZNF202O95125 648 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 KIF20AO95235 890 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 PRR29P0C7W0 189 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 CSH1P0DML2 217 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 CSH2P0DML3 217 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 HMGA1P17096 107 aaKnown RBP19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 CD72P21854 359 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 WARSP23381 471 aaKnown RBP19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 CYP2F1P24903 491 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 LMO2P25791 158 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 WEE1P30291 646 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 RPL10AP62906 217 aaKnown RBP19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 DPYDQ12882 1025 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 TRPC3Q13507 836 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 CFAP221Q4G0U5 840 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 ZNF852Q6ZMS4 543 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 TPRG1Q6ZUI0 275 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 SPATA2LQ8IUW3 424 aaPredicted RBP19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 PLEKHO2Q8TD55 490 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 PARD3BQ8TEW8 1205 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 FUBP3Q96I24 572 aaKnown RBP eCLIP19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 GCNAQ96QF7 691 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 GOLPH3LQ9H4A5 285 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 LTB4R2Q9NPC1 389 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 CDH9Q9ULB4 789 aa19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 MTF2Q9Y483 593 aaPredicted RBP19.72■□□□□ 0.75
PRPF40A-209ENST00000486100 PROB1E7EW31 1015 aa19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 LRRN2O75325 713 aa19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 TACC1O75410 805 aa19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 STAU1O95793 577 aaKnown RBP19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 GLULP15104 373 aa19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 ATICP31939 592 aa19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 GPR15P49685 360 aa19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 AP3M2P53677 418 aa19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 CLDN10P78369 228 aa19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 NUCB2P80303 420 aa19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 UBXN2BQ14CS0 331 aa19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 DDR2Q16832 855 aa19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 WDR72Q3MJ13 1102 aa19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 GPIHBP1Q8IV16 184 aa19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 RSPRY1Q96DX4 576 aa19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 SYT15Q9BQS2 421 aa19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 OBP2AQ9NY56 170 aa19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 ZMYM5Q9UJ78 669 aa19.71■□□□□ 0.75
PRPF40A-209ENST00000486100 MAN2B1O00754 1011 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 DPYSL4O14531 572 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 PHACTR2O75167 634 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 ATP2C2O75185 946 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 F11P03951 625 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 NR3C1P04150 777 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 PDGFRBP09619 1106 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 GNL1P36915 607 aaPredicted RBP19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 NBL1P41271 181 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 CASP4P49662 377 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 MYL6P60660 151 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 CYP4F8P98187 520 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 FCHO2Q0JRZ9 810 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 MAPRE1Q15691 268 aaKnown RBP19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 CCDC142Q17RM4 750 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 SDHAF4Q5VUM1 108 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 C4orf50Q6ZRC1 276 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 TMEM150AQ86TG1 271 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 YAF2Q8IY57 180 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 SLC46A2Q9BY10 475 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 BCO2Q9BYV7 579 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 MAGEC2Q9UBF1 373 aaPredicted RBP19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 TRAF3IP3Q9Y228 551 aa19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 MRPS17Q9Y2R5 130 aaKnown RBP19.7■□□□□ 0.74
PRPF40A-209ENST00000486100 NCANO14594 1321 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms