RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 LCLAT1Q6UWP7 414 aa15.3■□□□□ 0.04
COL9A1-207ENST00000486080 TMEM86AQ8N2M4 240 aa15.3■□□□□ 0.04
COL9A1-207ENST00000486080 TMEM199Q8N511 208 aa15.3■□□□□ 0.04
COL9A1-207ENST00000486080 RSPH1Q8WYR4 309 aa15.3■□□□□ 0.04
COL9A1-207ENST00000486080 DDX43Q9NXZ2 648 aaKnown RBP15.3■□□□□ 0.04
COL9A1-207ENST00000486080 CTTNBP2NLQ9P2B4 639 aa15.3■□□□□ 0.04
COL9A1-207ENST00000486080 GTF3C4Q9UKN8 822 aa15.3■□□□□ 0.04
COL9A1-207ENST00000486080 PCDHGC5Q9Y5F6 944 aa15.3■□□□□ 0.04
COL9A1-207ENST00000486080 COL4A6Q14031 1691 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 ABHD14A-ACY1A0A1B0GW23 586 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 CTAGE9A4FU28 777 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 M0QZQ0 153 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 ATP1A1P05023 1023 aaKnown RBP15.29■□□□□ 0.04
COL9A1-207ENST00000486080 PFKMP08237 780 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 FAM163BP0C2L3 166 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 ODC1P11926 461 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 MMP8P22894 467 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 B3GALNT2Q8NCR0 500 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 SUSD3Q96L08 255 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 ALS2CR12Q96Q35 445 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 NAPGQ99747 312 aaPredicted RBP15.29■□□□□ 0.04
COL9A1-207ENST00000486080 NUP85Q9BW27 656 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 ZNF518BQ9C0D4 1074 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 CEP83Q9Y592 693 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 PTPRSQ13332 1948 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 NRP1O14786 923 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 FTCDO95954 541 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 GPD2P43304 727 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 DEFB103AP81534 67 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 C1QBPQ07021 282 aaKnown RBP15.29■□□□□ 0.04
COL9A1-207ENST00000486080 TCEAL1Q15170 157 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 ARHGAP17Q68EM7 881 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 TTC30AQ86WT1 665 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 ERICH1Q86X53 443 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 RHOT2Q8IXI1 618 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 LRRC57Q8N9N7 239 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 RTP3Q9BQQ7 232 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 TJP2Q9UDY2 1190 aa15.29■□□□□ 0.04
COL9A1-207ENST00000486080 VWA8A3KMH1 1905 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 NCK2O43639 380 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 BUB1BO60566 1050 aaPredicted RBP15.28■□□□□ 0.04
COL9A1-207ENST00000486080 DGKIO75912 1065 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 URI1O94763 535 aaPredicted RBP15.28■□□□□ 0.04
COL9A1-207ENST00000486080 PTPN1P18031 435 aaKnown RBP15.28■□□□□ 0.04
COL9A1-207ENST00000486080 ADORA2BP29275 332 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 TKTP29401 623 aaKnown RBP15.28■□□□□ 0.04
COL9A1-207ENST00000486080 PBX3P40426 434 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 LHX1P48742 406 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 SLC11A1P49279 550 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 PTPROQ16827 1216 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 PTPN20Q4JDL3 420 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 CYP4A22Q5TCH4 519 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 FAM117BQ6P1L5 589 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 C16orf59Q7L2K0 433 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 SLC2A14Q8TDB8 520 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 TOP1MTQ969P6 601 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 ABHD8Q96I13 439 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 VCPIP1Q96JH7 1222 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 TNIP3Q96KP6 325 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 CRTAC1Q9NQ79 661 aa15.28■□□□□ 0.04
COL9A1-207ENST00000486080 RNF216Q9NWF9 866 aaPredicted RBP15.28■□□□□ 0.04
COL9A1-207ENST00000486080 TMEM189-UBE2V1I3L0A0 370 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 TULP2O00295 520 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 GJB6O95452 261 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 CYP11A1P05108 521 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 MYBL1P10243 752 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 BCAR1P56945 870 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 WDR5P61964 334 aaKnown RBP15.27■□□□□ 0.04
COL9A1-207ENST00000486080 STILQ15468 1287 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 IFI16Q16666 785 aaKnown RBP15.27■□□□□ 0.04
COL9A1-207ENST00000486080 PKDCCQ504Y2 493 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 MDH1BQ5I0G3 518 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 OTOP2Q7RTS6 562 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 C7orf61Q8IZ16 206 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 ZNF564Q8TBZ8 553 aaPredicted RBP15.27■□□□□ 0.04
COL9A1-207ENST00000486080 BADQ92934 168 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 TRIM11Q96F44 468 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 BTBD6Q96KE9 485 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 CPXM1Q96SM3 734 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 SYT15Q9BQS2 421 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 MRPL9Q9BYD2 267 aaKnown RBP15.27■□□□□ 0.04
COL9A1-207ENST00000486080 TRIM7Q9C029 511 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 IL23AQ9NPF7 189 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 AVENQ9NQS1 362 aaPredicted RBP15.27■□□□□ 0.04
COL9A1-207ENST00000486080 JRKLQ9Y4A0 524 aa15.27■□□□□ 0.04
COL9A1-207ENST00000486080 MYBPHLA2RUH7 354 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 NT5C1B-RDH14C9J2C7 533 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 TADA2AO75478 443 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 AMHP03971 560 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 ALDH2P05091 517 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 GALTP07902 379 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 PAX3P23760 479 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 HADHBP55084 474 aaKnown RBP15.27■□□□□ 0.03
COL9A1-207ENST00000486080 PDCLQ13371 301 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 LIN9Q5TKA1 542 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 PPP1R2P3Q6NXS1 205 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 METTL23Q86XA0 190 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 TNS4Q8IZW8 715 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 FUKQ8N0W3 1084 aa15.27■□□□□ 0.03
COL9A1-207ENST00000486080 LRRC43Q8N309 656 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms