RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SCN4BQ8IWT1 228 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 OR6B3Q8NGW1 331 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 GCNAQ96QF7 691 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 TRMT61BQ9BVS5 477 aaKnown RBP18.92■□□□□ 0.62
COL6A1-204ENST00000486023 FOXQ1Q9C009 403 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 KCTD10Q9H3F6 313 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 HSFX1Q9UBD0 423 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 DOCK8Q8NF50 2099 aa18.92■□□□□ 0.62
COL6A1-204ENST00000486023 LRRIQ3A6PVS8 624 aaPredicted RBP18.91■□□□□ 0.62
COL6A1-204ENST00000486023 GALR2O43603 387 aaPredicted RBP18.91■□□□□ 0.62
COL6A1-204ENST00000486023 RHOBTB3O94955 611 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 KIF20AO95235 890 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 FCARP24071 287 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 GDI1P31150 447 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 DLG4P78352 724 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 PFKPQ01813 784 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 CYP27A1Q02318 531 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 ARHGAP15Q53QZ3 475 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 GAREM2Q75VX8 874 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 DPH6Q7L8W6 267 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 SMYD4Q8IYR2 804 aaPredicted RBP18.91■□□□□ 0.62
COL6A1-204ENST00000486023 PLEKHO2Q8TD55 490 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 KBTBD7Q8WVZ9 684 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 SHDQ96IW2 340 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 PHOX2BQ99453 314 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 SYT15Q9BQS2 421 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 MRPL45Q9BRJ2 306 aaKnown RBP18.91■□□□□ 0.62
COL6A1-204ENST00000486023 GPR88Q9GZN0 384 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 GZF1Q9H116 711 aaPredicted RBP18.91■□□□□ 0.62
COL6A1-204ENST00000486023 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.91■□□□□ 0.62
COL6A1-204ENST00000486023 HEBP1Q9NRV9 189 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 FRMD4BQ9Y2L6 1034 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 SIT1Q9Y3P8 196 aa18.91■□□□□ 0.62
COL6A1-204ENST00000486023 NOTCH4Q99466 2003 aa18.9■□□□□ 0.62
COL6A1-204ENST00000486023 HEPACAM2A8MVW5 462 aa18.9■□□□□ 0.62
COL6A1-204ENST00000486023 DPYSL4O14531 572 aa18.9■□□□□ 0.62
COL6A1-204ENST00000486023 GNL1P36915 607 aaPredicted RBP18.9■□□□□ 0.62
COL6A1-204ENST00000486023 UBXN2BQ14CS0 331 aa18.9■□□□□ 0.62
COL6A1-204ENST00000486023 MLF2Q15773 248 aaPredicted RBP18.9■□□□□ 0.62
COL6A1-204ENST00000486023 VITQ6UXI7 678 aa18.9■□□□□ 0.62
COL6A1-204ENST00000486023 ARID3BQ8IVW6 561 aaPredicted RBP18.9■□□□□ 0.62
COL6A1-204ENST00000486023 YAF2Q8IY57 180 aa18.9■□□□□ 0.62
COL6A1-204ENST00000486023 TTC16Q8NEE8 873 aa18.9■□□□□ 0.62
COL6A1-204ENST00000486023 PARD3BQ8TEW8 1205 aa18.9■□□□□ 0.62
COL6A1-204ENST00000486023 ERCC4Q92889 916 aaPredicted RBP18.9■□□□□ 0.62
COL6A1-204ENST00000486023 MMRN2Q9H8L6 949 aa18.9■□□□□ 0.62
COL6A1-204ENST00000486023 DMAC2Q9NW81 257 aa18.9■□□□□ 0.62
COL6A1-204ENST00000486023 GABRDO14764 452 aa18.89■□□□□ 0.61
COL6A1-204ENST00000486023 ZNF263O14978 683 aa18.89■□□□□ 0.61
COL6A1-204ENST00000486023 LRRN2O75325 713 aa18.89■□□□□ 0.61
COL6A1-204ENST00000486023 FGF19O95750 216 aa18.89■□□□□ 0.61
COL6A1-204ENST00000486023 PSMC3P17980 439 aa18.89■□□□□ 0.61
COL6A1-204ENST00000486023 RPL10AP62906 217 aaKnown RBP18.89■□□□□ 0.61
COL6A1-204ENST00000486023 TDRD10Q5VZ19 366 aaKnown RBP18.89■□□□□ 0.61
COL6A1-204ENST00000486023 SCARA5Q6ZMJ2 495 aa18.89■□□□□ 0.61
COL6A1-204ENST00000486023 TPRG1Q6ZUI0 275 aa18.89■□□□□ 0.61
COL6A1-204ENST00000486023 FMR1NBQ8N0W7 255 aaPredicted RBP18.89■□□□□ 0.61
COL6A1-204ENST00000486023 DTWD2Q8NBA8 298 aa18.89■□□□□ 0.61
COL6A1-204ENST00000486023 MYLPFQ96A32 169 aa18.89■□□□□ 0.61
COL6A1-204ENST00000486023 SYAP1Q96A49 352 aaPredicted RBP18.89■□□□□ 0.61
COL6A1-204ENST00000486023 SMG9Q9H0W8 520 aaKnown RBP18.89■□□□□ 0.61
COL6A1-204ENST00000486023 MAGEC2Q9UBF1 373 aaPredicted RBP18.89■□□□□ 0.61
COL6A1-204ENST00000486023 CDH9Q9ULB4 789 aa18.89■□□□□ 0.61
COL6A1-204ENST00000486023 ZNF318Q5VUA4 2279 aa18.89■□□□□ 0.61
COL6A1-204ENST00000486023 A8MXQ7 604 aa18.88■□□□□ 0.61
COL6A1-204ENST00000486023 WARSP23381 471 aaKnown RBP18.88■□□□□ 0.61
COL6A1-204ENST00000486023 BDNFP23560 247 aa18.88■□□□□ 0.61
COL6A1-204ENST00000486023 NR2F2P24468 414 aa18.88■□□□□ 0.61
COL6A1-204ENST00000486023 CDC25CP30307 473 aa18.88■□□□□ 0.61
COL6A1-204ENST00000486023 GRIK1P39086 918 aa18.88■□□□□ 0.61
COL6A1-204ENST00000486023 CDH8P55286 799 aa18.88■□□□□ 0.61
COL6A1-204ENST00000486023 NCOA4Q13772 614 aa18.88■□□□□ 0.61
COL6A1-204ENST00000486023 ZNF699Q32M78 642 aa18.88■□□□□ 0.61
COL6A1-204ENST00000486023 MDH1BQ5I0G3 518 aa18.88■□□□□ 0.61
COL6A1-204ENST00000486023 C4orf50Q6ZRC1 276 aa18.88■□□□□ 0.61
COL6A1-204ENST00000486023 SLC9A9Q8IVB4 645 aa18.88■□□□□ 0.61
COL6A1-204ENST00000486023 TTC8Q8TAM2 541 aa18.88■□□□□ 0.61
COL6A1-204ENST00000486023 RSPRY1Q96DX4 576 aa18.88■□□□□ 0.61
COL6A1-204ENST00000486023 EEF2KMTQ96G04 330 aa18.88■□□□□ 0.61
COL6A1-204ENST00000486023 CRTAC1Q9NQ79 661 aa18.88■□□□□ 0.61
COL6A1-204ENST00000486023 MTF2Q9Y483 593 aaPredicted RBP18.88■□□□□ 0.61
COL6A1-204ENST00000486023 KANSL1LA0AUZ9 987 aa18.87■□□□□ 0.61
COL6A1-204ENST00000486023 FAM170BA6NMN3 283 aa18.87■□□□□ 0.61
COL6A1-204ENST00000486023 SLC38A8A6NNN8 435 aa18.87■□□□□ 0.61
COL6A1-204ENST00000486023 C4BPAP04003 597 aaKnown RBP18.87■□□□□ 0.61
COL6A1-204ENST00000486023 CSH1P0DML2 217 aa18.87■□□□□ 0.61
COL6A1-204ENST00000486023 CSH2P0DML3 217 aa18.87■□□□□ 0.61
COL6A1-204ENST00000486023 ATICP31939 592 aa18.87■□□□□ 0.61
COL6A1-204ENST00000486023 RAP1GAPP47736 663 aa18.87■□□□□ 0.61
COL6A1-204ENST00000486023 AP3M2P53677 418 aa18.87■□□□□ 0.61
COL6A1-204ENST00000486023 STARD6P59095 220 aa18.87■□□□□ 0.61
COL6A1-204ENST00000486023 ADAM9Q13443 819 aa18.87■□□□□ 0.61
COL6A1-204ENST00000486023 KCNB1Q14721 858 aa18.87■□□□□ 0.61
COL6A1-204ENST00000486023 ISM2Q6H9L7 571 aa18.87■□□□□ 0.61
COL6A1-204ENST00000486023 PHLDB3Q6NSJ2 640 aa18.87■□□□□ 0.61
COL6A1-204ENST00000486023 MAB21L3Q8N8X9 362 aa18.87■□□□□ 0.61
COL6A1-204ENST00000486023 SPATA18Q8TC71 538 aa18.87■□□□□ 0.61
COL6A1-204ENST00000486023 IRF7Q92985 503 aa18.87■□□□□ 0.61
COL6A1-204ENST00000486023 PKMYT1Q99640 499 aa18.87■□□□□ 0.61
COL6A1-204ENST00000486023 SLC46A2Q9BY10 475 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms