RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 APOBEC3GQ9HC16 384 aaKnown RBP19■□□□□ 0.63
SREBF1-213ENST00000485080 CEP72Q9P209 647 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 GTF3C4Q9UKN8 822 aa19■□□□□ 0.63
SREBF1-213ENST00000485080 MYBPHLA2RUH7 354 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 C2CD4DB7Z1M9 353 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 DLL1O00548 723 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 ACAT1P24752 427 aaKnown RBP18.99■□□□□ 0.63
SREBF1-213ENST00000485080 MAGEA11P43364 429 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 FMO5P49326 533 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 EPHB3P54753 998 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 INCA1Q0VD86 236 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 PABPC1LQ4VXU2 614 aaKnown RBP18.99■□□□□ 0.63
SREBF1-213ENST00000485080 C4orf50Q6ZRC1 276 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 UNC93AQ86WB7 457 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 IRF2BP1Q8IU81 584 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 TTC39CQ8N584 583 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 TDRD5Q8NAT2 981 aaKnown RBP18.99■□□□□ 0.63
SREBF1-213ENST00000485080 OR6B3Q8NGW1 331 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 CEP295NLQ96MC4 621 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 ZNF512Q96ME7 567 aaPredicted RBP18.99■□□□□ 0.63
SREBF1-213ENST00000485080 NIF3L1Q9GZT8 377 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 SDCBP2Q9H190 292 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 DNAJC25Q9H1X3 360 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 CRTAC1Q9NQ79 661 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 EPS15L1Q9UBC2 864 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 SLC27A5Q9Y2P5 690 aa18.99■□□□□ 0.63
SREBF1-213ENST00000485080 MYO10Q9HD67 2058 aa18.98■□□□□ 0.63
SREBF1-213ENST00000485080 HCRTO43612 131 aa18.98■□□□□ 0.63
SREBF1-213ENST00000485080 RHOP08100 348 aa18.98■□□□□ 0.63
SREBF1-213ENST00000485080 PDGFRBP09619 1106 aa18.98■□□□□ 0.63
SREBF1-213ENST00000485080 PTMSP20962 102 aa18.98■□□□□ 0.63
SREBF1-213ENST00000485080 FSHRP23945 695 aa18.98■□□□□ 0.63
SREBF1-213ENST00000485080 SSTR3P32745 418 aaPredicted RBP18.98■□□□□ 0.63
SREBF1-213ENST00000485080 CDH8P55286 799 aa18.98■□□□□ 0.63
SREBF1-213ENST00000485080 IQCEQ6IPM2 695 aa18.98■□□□□ 0.63
SREBF1-213ENST00000485080 SPOPLQ6IQ16 392 aa18.98■□□□□ 0.63
SREBF1-213ENST00000485080 TTC9BQ8N6N2 239 aa18.98■□□□□ 0.63
SREBF1-213ENST00000485080 PSMG2Q969U7 264 aa18.98■□□□□ 0.63
SREBF1-213ENST00000485080 PI4K2AQ9BTU6 479 aa18.98■□□□□ 0.63
SREBF1-213ENST00000485080 THAP9Q9H5L6 903 aa18.98■□□□□ 0.63
SREBF1-213ENST00000485080 MMRN2Q9H8L6 949 aa18.98■□□□□ 0.63
SREBF1-213ENST00000485080 ABI2Q9NYB9 513 aaPredicted RBP18.98■□□□□ 0.63
SREBF1-213ENST00000485080 A8MXQ7 604 aa18.97■□□□□ 0.63
SREBF1-213ENST00000485080 ZNF197O14709 1029 aa18.97■□□□□ 0.63
SREBF1-213ENST00000485080 ATP2C2O75185 946 aa18.97■□□□□ 0.63
SREBF1-213ENST00000485080 PTPN1P18031 435 aaKnown RBP18.97■□□□□ 0.63
SREBF1-213ENST00000485080 WDR44Q5JSH3 913 aa18.97■□□□□ 0.63
SREBF1-213ENST00000485080 PRSS36Q5K4E3 855 aa18.97■□□□□ 0.63
SREBF1-213ENST00000485080 VSTM1Q6UX27 236 aa18.97■□□□□ 0.63
SREBF1-213ENST00000485080 ITIH5Q86UX2 942 aa18.97■□□□□ 0.63
SREBF1-213ENST00000485080 RNF135Q8IUD6 432 aa18.97■□□□□ 0.63
SREBF1-213ENST00000485080 CRYBG2Q8N1P7 616 aa18.97■□□□□ 0.63
SREBF1-213ENST00000485080 B3GALNT2Q8NCR0 500 aa18.97■□□□□ 0.63
SREBF1-213ENST00000485080 TNIP3Q96KP6 325 aa18.97■□□□□ 0.63
SREBF1-213ENST00000485080 LRRC3Q9BY71 257 aa18.97■□□□□ 0.63
SREBF1-213ENST00000485080 ANO10Q9NW15 660 aa18.97■□□□□ 0.63
SREBF1-213ENST00000485080 HCFC1R1Q9NWW0 138 aa18.97■□□□□ 0.63
SREBF1-213ENST00000485080 TMEM63CQ9P1W3 806 aa18.97■□□□□ 0.63
SREBF1-213ENST00000485080 LRRN2O75325 713 aa18.96■□□□□ 0.63
SREBF1-213ENST00000485080 LAMP2P13473 410 aa18.96■□□□□ 0.63
SREBF1-213ENST00000485080 PRKCSHP14314 528 aaPredicted RBP18.96■□□□□ 0.63
SREBF1-213ENST00000485080 ATF6P18850 670 aa18.96■□□□□ 0.63
SREBF1-213ENST00000485080 RPL10AP62906 217 aaKnown RBP18.96■□□□□ 0.63
SREBF1-213ENST00000485080 NTHL1P78549 312 aa18.96■□□□□ 0.63
SREBF1-213ENST00000485080 CETN1Q12798 172 aa18.96■□□□□ 0.63
SREBF1-213ENST00000485080 KCNH2Q12809 1159 aa18.96■□□□□ 0.63
SREBF1-213ENST00000485080 KLHL40Q2TBA0 621 aa18.96■□□□□ 0.63
SREBF1-213ENST00000485080 MGAT5BQ3V5L5 792 aa18.96■□□□□ 0.63
SREBF1-213ENST00000485080 DNAJB7Q7Z6W7 309 aaPredicted RBP18.96■□□□□ 0.63
SREBF1-213ENST00000485080 SPATA2LQ8IUW3 424 aaPredicted RBP18.96■□□□□ 0.63
SREBF1-213ENST00000485080 ENOX1Q8TC92 643 aaKnown RBP18.96■□□□□ 0.63
SREBF1-213ENST00000485080 NXPE3Q969Y0 559 aa18.96■□□□□ 0.63
SREBF1-213ENST00000485080 MYLPFQ96A32 169 aa18.96■□□□□ 0.63
SREBF1-213ENST00000485080 PCED1BQ96HM7 432 aa18.96■□□□□ 0.63
SREBF1-213ENST00000485080 CNOT6LQ96LI5 555 aaKnown RBP18.96■□□□□ 0.63
SREBF1-213ENST00000485080 MYADMQ96S97 322 aa18.96■□□□□ 0.63
SREBF1-213ENST00000485080 ASAH2Q9NR71 780 aa18.96■□□□□ 0.63
SREBF1-213ENST00000485080 GDE1Q9NZC3 331 aa18.96■□□□□ 0.63
SREBF1-213ENST00000485080 MAGEC2Q9UBF1 373 aaPredicted RBP18.96■□□□□ 0.63
SREBF1-213ENST00000485080 CDH7Q9ULB5 785 aa18.96■□□□□ 0.63
SREBF1-213ENST00000485080 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.96■□□□□ 0.632e-6■■□□□ 12
SREBF1-213ENST00000485080 PTPRDP23468 1912 aa18.96■□□□□ 0.63
SREBF1-213ENST00000485080 FGF19O95750 216 aa18.95■□□□□ 0.62
SREBF1-213ENST00000485080 AFPP02771 609 aaKnown RBP18.95■□□□□ 0.62
SREBF1-213ENST00000485080 CYP2F1P24903 491 aa18.95■□□□□ 0.62
SREBF1-213ENST00000485080 RAP1GAPP47736 663 aa18.95■□□□□ 0.62
SREBF1-213ENST00000485080 PSMC1P62191 440 aaKnown RBP18.95■□□□□ 0.62
SREBF1-213ENST00000485080 VEPH1Q14D04 833 aa18.95■□□□□ 0.62
SREBF1-213ENST00000485080 CYP4A22Q5TCH4 519 aa18.95■□□□□ 0.62
SREBF1-213ENST00000485080 SASS6Q6UVJ0 657 aa18.95■□□□□ 0.62
SREBF1-213ENST00000485080 SCARA5Q6ZMJ2 495 aa18.95■□□□□ 0.62
SREBF1-213ENST00000485080 TMC8Q8IU68 726 aa18.95■□□□□ 0.62
SREBF1-213ENST00000485080 FAM114A1Q8IWE2 563 aa18.95■□□□□ 0.62
SREBF1-213ENST00000485080 LMO3Q8TAP4 145 aa18.95■□□□□ 0.62
SREBF1-213ENST00000485080 ITFG1Q8TB96 612 aa18.95■□□□□ 0.62
SREBF1-213ENST00000485080 FGF13Q92913 245 aa18.95■□□□□ 0.62
SREBF1-213ENST00000485080 ELMO3Q96BJ8 720 aa18.95■□□□□ 0.62
SREBF1-213ENST00000485080 SEPT5Q99719 369 aaPredicted RBP18.95■□□□□ 0.62
SREBF1-213ENST00000485080 CORO1BQ9BR76 489 aa18.95■□□□□ 0.62
SREBF1-213ENST00000485080 MRPS23Q9Y3D9 190 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms