RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 VNN1O95497 513 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 TRIM49P0CI25 452 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 TRIM49CP0CI26 452 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 NPR3P17342 541 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 RFX1P22670 979 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 PCSK1P29120 753 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 VIPR2P41587 438 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 RAP1GAPP47736 663 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 LHX1P48742 406 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 CYP4F8P98187 520 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 TAF12Q16514 161 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 NFE2Q16621 373 aaPredicted RBP13.15□□□□□ -0.3
MSH5-216ENST00000484309 DDR2Q16832 855 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 ZNF699Q32M78 642 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 ISM2Q6H9L7 571 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 GAREM2Q75VX8 874 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 LIMS2Q7Z4I7 341 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 ITIH5Q86UX2 942 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 SPATA2LQ8IUW3 424 aaPredicted RBP13.15□□□□□ -0.3
MSH5-216ENST00000484309 LEMD2Q8NC56 503 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 PRSS33Q8NF86 280 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 OR6B3Q8NGW1 331 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 ZSCAN18Q8TBC5 510 aaPredicted RBP13.15□□□□□ -0.3
MSH5-216ENST00000484309 C2orf15Q8WU43 125 aaKnown RBP13.15□□□□□ -0.3
MSH5-216ENST00000484309 MYLPFQ96A32 169 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 EEF2KMTQ96G04 330 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 XYLT2Q9H1B5 865 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 ATXN3LQ9H3M9 355 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 SMYD3Q9H7B4 428 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 MMRN2Q9H8L6 949 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 CRTAC1Q9NQ79 661 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.15□□□□□ -0.33e-23■■■■■ 126.7
MSH5-216ENST00000484309 HSFX1Q9UBD0 423 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 CIZ1Q9ULV3 898 aaPredicted RBP13.15□□□□□ -0.3
MSH5-216ENST00000484309 MAGED2Q9UNF1 606 aaPredicted RBP13.15□□□□□ -0.3
MSH5-216ENST00000484309 PCDHA5Q9Y5H7 936 aa13.15□□□□□ -0.3
MSH5-216ENST00000484309 NCANO14594 1321 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 PI15O43692 258 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 ECI2O75521 394 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 AKAP3O75969 853 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 C4BPAP04003 597 aaKnown RBP13.14□□□□□ -0.31
MSH5-216ENST00000484309 WARSP23381 471 aaKnown RBP13.14□□□□□ -0.31
MSH5-216ENST00000484309 PRCPP42785 496 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 SMARCB1Q12824 385 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 NCOA4Q13772 614 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 ZCWPW2Q504Y3 356 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 MDH1BQ5I0G3 518 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 C1orf220Q5T0J3 134 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 ASTLQ6HA08 431 aaPredicted RBP13.14□□□□□ -0.31
MSH5-216ENST00000484309 DPH6Q7L8W6 267 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 SCN4BQ8IWT1 228 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 FAM186BQ8IYM0 893 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 SPATA18Q8TC71 538 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 SMARCE1Q969G3 411 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 ASB16Q96NS5 453 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 SNX25Q9H3E2 840 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 DPEP3Q9H4B8 488 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 TBC1D17Q9HA65 648 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 ZFP14Q9HCL3 533 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 ARHGEF3Q9NR81 526 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 SLC2A4RGQ9NR83 387 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 RMND1Q9NWS8 449 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 WNT16Q9UBV4 365 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 ASB3Q9Y575 518 aa13.14□□□□□ -0.31
MSH5-216ENST00000484309 PATJQ8NI35 1801 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 KINO60870 393 aaKnown RBP13.13□□□□□ -0.31
MSH5-216ENST00000484309 MICAL2O94851 1124 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 SMC2O95347 1197 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 GNL1P36915 607 aaPredicted RBP13.13□□□□□ -0.31
MSH5-216ENST00000484309 VAMP7P51809 220 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 CDH8P55286 799 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 CLDN10P78369 228 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 CYP27A1Q02318 531 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 ADAM9Q13443 819 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 ZNF667Q5HYK9 610 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 GPR158Q5T848 1215 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 ZNF658Q5TYW1 1059 aaPredicted RBP13.13□□□□□ -0.31
MSH5-216ENST00000484309 SPOPLQ6IQ16 392 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 VITQ6UXI7 678 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 TMC2Q8TDI7 906 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 TMEM174Q8WUU8 243 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 SMARCD2Q92925 531 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 SYAP1Q96A49 352 aaPredicted RBP13.13□□□□□ -0.31
MSH5-216ENST00000484309 ELSPBP1Q96BH3 223 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 RSPRY1Q96DX4 576 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 FAM122AQ96E09 287 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 TIGD1Q96MW7 591 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 IL21Q9HBE4 155 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 CDH9Q9ULB4 789 aa13.13□□□□□ -0.31
MSH5-216ENST00000484309 TRIM49BA6NDI0 452 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 SLC38A8A6NNN8 435 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 A8MXQ7 604 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 TACC1O75410 805 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 STAU1O95793 577 aaKnown RBP13.12□□□□□ -0.31
MSH5-216ENST00000484309 HLA-DRAP01903 254 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 KRT13P13646 458 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 HMGA1P17096 107 aaKnown RBP13.12□□□□□ -0.31
MSH5-216ENST00000484309 AOC1P19801 751 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 BDNFP23560 247 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 RPL13P26373 211 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms