RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 SLC16A10Q8TF71 515 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 PRICKLE1Q96MT3 831 aaPredicted RBP12.4□□□□□ -0.42
VTI1A-205ENST00000483122 CATSPER2Q96P56 530 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 EIF2AK1Q9BQI3 630 aaKnown RBP12.4□□□□□ -0.42
VTI1A-205ENST00000483122 RABGEF1Q9UJ41 708 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 CLUHO75153 1309 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 MEI4A8MW99 385 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 ZBTB5O15062 677 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 ALOX15BO15296 676 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 TM9SF1O15321 606 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 TGDSO95455 350 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 CYP11B1P15538 503 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 PEX2P28328 305 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 SSTR1P30872 391 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 GTF2H1P32780 548 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 HIRAP54198 1017 aaPredicted RBP12.4□□□□□ -0.42
VTI1A-205ENST00000483122 EMP3P54852 163 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 PDE1BQ01064 536 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 SULT2A1Q06520 285 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 GPS1Q13098 491 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 CBX3Q13185 183 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 C1orf220Q5T0J3 134 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 NLRX1Q86UT6 975 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 PPM1KQ8N3J5 372 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 LENG9Q96B70 501 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 TMEM117Q9H0C3 514 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 PARVGQ9HBI0 331 aa12.4□□□□□ -0.42
VTI1A-205ENST00000483122 PPARGC1AQ9UBK2 798 aaKnown RBP12.4□□□□□ -0.42
VTI1A-205ENST00000483122 CCDC160A6NGH7 325 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 SPECC1L-ADORA2AF8WAN1 911 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 FKBP6O75344 327 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 CD58P19256 250 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 BTDP43251 543 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 ARSEP51690 589 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 CHN2P52757 468 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 TAS2R40P59535 323 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 ARHGAP4P98171 946 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 GAD2Q05329 585 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 EAPPQ56P03 285 aaPredicted RBP12.39□□□□□ -0.43
VTI1A-205ENST00000483122 ACAD10Q6JQN1 1059 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 C1orf186Q6ZWK4 172 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 NLGN1Q8N2Q7 840 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 METTL25Q8N6Q8 603 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 PLEKHO2Q8TD55 490 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 FAM111AQ96PZ2 611 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 PHF12Q96QT6 1004 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 PAFAH2Q99487 392 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 RTFDC1Q9BY42 306 aaPredicted RBP12.39□□□□□ -0.43
VTI1A-205ENST00000483122 KLHL4Q9C0H6 718 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 NDUFA13Q9P0J0 144 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 DNPEPQ9ULA0 475 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 FAM86B1E9PN63 330 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 SUPT3HO75486 399 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 SORBS2O94875 1100 aaKnown RBP12.39□□□□□ -0.43
VTI1A-205ENST00000483122 TFAP2AP05549 437 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 FAM86B2P0C5J1 330 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 AKR1B1P15121 316 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 VAMP7P51809 220 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 MMEL1Q495T6 779 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 ZNF554Q86TJ5 538 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 MAP7D3Q8IWC1 876 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 FAM178BQ8IXR5 827 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 WDR66Q8TBY9 1149 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 GDPD5Q8WTR4 605 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 YIPF2Q9BWQ6 316 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 KLHL11Q9NVR0 708 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 TAGLN3Q9UI15 199 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 VAV3Q9UKW4 847 aa12.39□□□□□ -0.43
VTI1A-205ENST00000483122 A0A088AWK7 358 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 C15orf38-AP3S2A0A0A6YYH1 394 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 DENND3A2RUS2 1198 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 TMEM221A6NGB7 291 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 GRIN3BO60391 1043 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 LPXNO60711 386 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 SLITRK3O94933 977 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 FUT4P22083 530 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 RPS8P62241 208 aaKnown RBP12.38□□□□□ -0.43
VTI1A-205ENST00000483122 MPP3Q13368 585 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 MTM1Q13496 603 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 ANKRD20A4Q4UJ75 823 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 ADGRD1Q6QNK2 874 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 ARPINQ7Z6K5 226 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 ADGRG6Q86SQ4 1221 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 PRPF39Q86UA1 669 aaKnown RBP12.38□□□□□ -0.43
VTI1A-205ENST00000483122 ZBTB8BQ8NAP8 495 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-205ENST00000483122 GAB3Q8WWW8 586 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 RPGRQ92834 1020 aaKnown RBP12.38□□□□□ -0.43
VTI1A-205ENST00000483122 MSH4O15457 936 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 DHRS4L1P0CG22 281 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 KRT10P13645 584 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 GLRA2P23416 452 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 PCSK6P29122 969 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 ALDH1B1P30837 517 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 ETV4P43268 484 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 NADK2Q4G0N4 442 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 SH3D19Q5HYK7 790 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 SYDE2Q5VT97 1194 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 KAZNQ674X7 775 aa12.38□□□□□ -0.43
VTI1A-205ENST00000483122 DPP8Q6V1X1 898 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-205ENST00000483122 CENPUQ71F23 418 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms