RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, human

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSH5-215	ENST00000482280	MAN2B1	O00754	1011 aa		21.32	■■□□□ 1
MSH5-215	ENST00000482280	MOSPD3	O75425	235 aa		21.32	■■□□□ 1
MSH5-215	ENST00000482280	ATF6	P18850	670 aa		21.32	■■□□□ 1
MSH5-215	ENST00000482280	VIPR2	P41587	438 aa		21.32	■■□□□ 1
MSH5-215	ENST00000482280	NDUFA8	P51970	172 aa		21.32	■■□□□ 1
MSH5-215	ENST00000482280	AP3M2	P53677	418 aa		21.32	■■□□□ 1
MSH5-215	ENST00000482280	STK4	Q13043	487 aa		21.32	■■□□□ 1
MSH5-215	ENST00000482280	BIRC3	Q13489	604 aa		21.32	■■□□□ 1
MSH5-215	ENST00000482280	SOWAHA	Q2M3V2	549 aa		21.32	■■□□□ 1
MSH5-215	ENST00000482280	VIT	Q6UXI7	678 aa		21.32	■■□□□ 1
MSH5-215	ENST00000482280	MFSD6L	Q8IWD5	586 aa		21.32	■■□□□ 1
MSH5-215	ENST00000482280	LRRC3	Q9BY71	257 aa		21.32	■■□□□ 1
MSH5-215	ENST00000482280	ZNF334	Q9HCZ1	680 aa	Predicted RBP	21.32	■■□□□ 1
MSH5-215	ENST00000482280	HEBP1	Q9NRV9	189 aa		21.32	■■□□□ 1
MSH5-215	ENST00000482280	UXT	Q9UBK9	157 aa	Predicted RBP	21.32	■■□□□ 1
MSH5-215	ENST00000482280	GTF3C4	Q9UKN8	822 aa		21.32	■■□□□ 1
MSH5-215	ENST00000482280	MAGED2	Q9UNF1	606 aa	Predicted RBP	21.32	■■□□□ 1
MSH5-215	ENST00000482280	FRMD4B	Q9Y2L6	1034 aa		21.32	■■□□□ 1
MSH5-215	ENST00000482280	DOCK6	Q96HP0	2047 aa		21.32	■■□□□ 1
MSH5-215	ENST00000482280	TSC2	P49815	1807 aa		21.32	■■□□□ 1
MSH5-215	ENST00000482280	SCN1A	P35498	2009 aa		21.31	■■□□□ 1
MSH5-215	ENST00000482280	CALU	O43852	315 aa	Predicted RBP	21.31	■■□□□ 1
MSH5-215	ENST00000482280	MAGEA9	P43362	315 aa		21.31	■■□□□ 1
MSH5-215	ENST00000482280	NUCB2	P80303	420 aa		21.31	■■□□□ 1
MSH5-215	ENST00000482280	ARID3B	Q8IVW6	561 aa	Predicted RBP	21.31	■■□□□ 1
MSH5-215	ENST00000482280	CXorf38	Q8TB03	319 aa		21.31	■■□□□ 1
MSH5-215	ENST00000482280	SYAP1	Q96A49	352 aa	Predicted RBP	21.31	■■□□□ 1
MSH5-215	ENST00000482280	FUBP3	Q96I24	572 aa	Known RBP eCLIP	21.31	■■□□□ 1
MSH5-215	ENST00000482280	SYT15	Q9BQS2	421 aa		21.31	■■□□□ 1
MSH5-215	ENST00000482280	OSBPL6	Q9BZF3	934 aa		21.31	■■□□□ 1
MSH5-215	ENST00000482280	TASP1	Q9H6P5	420 aa		21.31	■■□□□ 1
MSH5-215	ENST00000482280	CDH9	Q9ULB4	789 aa		21.31	■■□□□ 1
MSH5-215	ENST00000482280	NOTCH4	Q99466	2003 aa		21.3	■■□□□ 1
MSH5-215	ENST00000482280	KLRC4	O43908	158 aa		21.3	■■□□□ 1
MSH5-215	ENST00000482280	AVPR1A	P37288	418 aa		21.3	■■□□□ 1
MSH5-215	ENST00000482280	WDR72	Q3MJ13	1102 aa		21.3	■■□□□ 1
MSH5-215	ENST00000482280	GAREM2	Q75VX8	874 aa		21.3	■■□□□ 1
MSH5-215	ENST00000482280	SCN4B	Q8IWT1	228 aa		21.3	■■□□□ 1
MSH5-215	ENST00000482280	OR6B3	Q8NGW1	331 aa		21.3	■■□□□ 1
MSH5-215	ENST00000482280	MRPS31	Q92665	395 aa	Known RBP	21.3	■■□□□ 1
MSH5-215	ENST00000482280	CHAMP1	Q96JM3	812 aa		21.3	■■□□□ 1
MSH5-215	ENST00000482280	PHOX2B	Q99453	314 aa		21.3	■■□□□ 1
MSH5-215	ENST00000482280	LTB4R2	Q9NPC1	389 aa		21.3	■■□□□ 1
MSH5-215	ENST00000482280	TMLHE	Q9NVH6	421 aa		21.3	■■□□□ 1
MSH5-215	ENST00000482280	THG1L	Q9NWX6	298 aa	Known RBP	21.3	■■□□□ 1
MSH5-215	ENST00000482280	MAGEC2	Q9UBF1	373 aa	Predicted RBP	21.3	■■□□□ 1
MSH5-215	ENST00000482280	PDXK	O00764	312 aa		21.29	■■□□□ 1
MSH5-215	ENST00000482280	GABRD	O14764	452 aa		21.29	■■□□□ 1
MSH5-215	ENST00000482280	CYP2F1	P24903	491 aa		21.29	■■□□□ 1
MSH5-215	ENST00000482280	DDX6	P26196	483 aa	Known RBP eCLIP	21.29	■■□□□ 1
MSH5-215	ENST00000482280	ANXA13	P27216	316 aa		21.29	■■□□□ 1
MSH5-215	ENST00000482280	ATIC	P31939	592 aa		21.29	■■□□□ 1
MSH5-215	ENST00000482280	CYP4F8	P98187	520 aa		21.29	■■□□□ 1
MSH5-215	ENST00000482280	CYP27A1	Q02318	531 aa		21.29	■■□□□ 1
MSH5-215	ENST00000482280	CFAP221	Q4G0U5	840 aa		21.29	■■□□□ 1
MSH5-215	ENST00000482280	STXBP5	Q5T5C0	1151 aa		21.29	■■□□□ 1
MSH5-215	ENST00000482280	CEP135	Q66GS9	1140 aa		21.29	■■□□□ 1
MSH5-215	ENST00000482280	KRBA2	Q6ZNG9	492 aa		21.29	■■□□□ 1
MSH5-215	ENST00000482280	KIAA0895	Q8NCT3	520 aa		21.29	■■□□□ 1
MSH5-215	ENST00000482280	DDX23	Q9BUQ8	820 aa	Known RBP	21.29	■■□□□ 1
MSH5-215	ENST00000482280	TRPV5	Q9NQA5	729 aa		21.29	■■□□□ 1
MSH5-215	ENST00000482280	SPATA6	Q9NWH7	488 aa	Predicted RBP	21.29	■■□□□ 1
MSH5-215	ENST00000482280	NXF1	Q9UBU9	619 aa	Known RBP	21.29	■■□□□ 1
MSH5-215	ENST00000482280	FAM237A	A0A1B0GTK4	181 aa		21.28	■■□□□ 1
MSH5-215	ENST00000482280	GFRA3	O60609	400 aa		21.28	■■□□□ 1
MSH5-215	ENST00000482280	NR3C1	P04150	777 aa		21.28	■■□□□ 1
MSH5-215	ENST00000482280	PDGFRB	P09619	1106 aa		21.28	■■□□□ 1
MSH5-215	ENST00000482280	CD72	P21854	359 aa		21.28	■■□□□ 1
MSH5-215	ENST00000482280	WARS	P23381	471 aa	Known RBP	21.28	■■□□□ 1
MSH5-215	ENST00000482280	GNL1	P36915	607 aa	Predicted RBP	21.28	■■□□□ 1
MSH5-215	ENST00000482280	KPNA1	P52294	538 aa	Predicted RBP	21.28	■■□□□ 1
MSH5-215	ENST00000482280	C1orf228	Q6PIY5	440 aa		21.28	■■□□□ 1
MSH5-215	ENST00000482280	ZC3H14	Q6PJT7	736 aa	Known RBP	21.28	■■□□□ 1
MSH5-215	ENST00000482280	OSTM1	Q86WC4	334 aa		21.28	■■□□□ 1
MSH5-215	ENST00000482280	SLC9A9	Q8IVB4	645 aa		21.28	■■□□□ 1
MSH5-215	ENST00000482280	C1orf210	Q8IVY1	113 aa		21.28	■■□□□ 1
MSH5-215	ENST00000482280	MSANTD3	Q96H12	275 aa		21.28	■■□□□ 1
MSH5-215	ENST00000482280	GDPD2	Q9HCC8	539 aa		21.28	■■□□□ 1
MSH5-215	ENST00000482280	OBP2A	Q9NY56	170 aa		21.28	■■□□□ 1
MSH5-215	ENST00000482280	EHD2	Q9NZN4	543 aa		21.28	■■□□□ 1
MSH5-215	ENST00000482280	PIAS3	Q9Y6X2	628 aa		21.28	■■□□□ 1
MSH5-215	ENST00000482280	CHAD	O15335	359 aa		21.27	■■□□□ 1
MSH5-215	ENST00000482280	LAMTOR5	O43504	91 aa		21.27	■■□□□ 1
MSH5-215	ENST00000482280	ZNF202	O95125	648 aa		21.27	■■□□□ 1
MSH5-215	ENST00000482280	CST3	P01034	146 aa	Predicted RBP	21.27	■■□□□ 1
MSH5-215	ENST00000482280	FAM163B	P0C2L3	166 aa		21.27	■■□□□ 1
MSH5-215	ENST00000482280	P4HA1	P13674	534 aa		21.27	■■□□□ 1
MSH5-215	ENST00000482280	GLUL	P15104	373 aa		21.27	■■□□□ 1
MSH5-215	ENST00000482280	TRIM21	P19474	475 aa	Known RBP	21.27	■■□□□ 1
MSH5-215	ENST00000482280	RPL13	P26373	211 aa	Known RBP	21.27	■■□□□ 1
MSH5-215	ENST00000482280	GRIK1	P39086	918 aa		21.27	■■□□□ 1
MSH5-215	ENST00000482280	NBL1	P41271	181 aa		21.27	■■□□□ 1
MSH5-215	ENST00000482280	NLRP12	P59046	1061 aa		21.27	■■□□□ 1
MSH5-215	ENST00000482280	PSMC1	P62191	440 aa	Known RBP	21.27	■■□□□ 1
MSH5-215	ENST00000482280	DDR2	Q16832	855 aa		21.27	■■□□□ 1
MSH5-215	ENST00000482280	ZNF699	Q32M78	642 aa		21.27	■■□□□ 1
MSH5-215	ENST00000482280	ARHGAP29	Q52LW3	1261 aa		21.27	■■□□□ 1
MSH5-215	ENST00000482280	POTEH	Q6S545	545 aa		21.27	■■□□□ 1
MSH5-215	ENST00000482280	GPIHBP1	Q8IV16	184 aa		21.27	■■□□□ 1
MSH5-215	ENST00000482280	CELF5	Q8N6W0	485 aa	Known RBP	21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms