RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 DMWDQ09019 674 aa20.81■□□□□ 0.92
CHPF2-203ENST00000482173 BFSP1Q12934 665 aa20.81■□□□□ 0.92
CHPF2-203ENST00000482173 ALCAMQ13740 583 aa20.81■□□□□ 0.92
CHPF2-203ENST00000482173 SLC39A14Q15043 492 aa20.81■□□□□ 0.92
CHPF2-203ENST00000482173 SCARA3Q6AZY7 606 aa20.81■□□□□ 0.92
CHPF2-203ENST00000482173 TMEM150AQ86TG1 271 aa20.81■□□□□ 0.92
CHPF2-203ENST00000482173 LRRC52Q8N7C0 313 aa20.81■□□□□ 0.92
CHPF2-203ENST00000482173 FAM84AQ96KN4 292 aa20.81■□□□□ 0.92
CHPF2-203ENST00000482173 USP28Q96RU2 1077 aa20.81■□□□□ 0.92
CHPF2-203ENST00000482173 ACBD6Q9BR61 282 aa20.81■□□□□ 0.92
CHPF2-203ENST00000482173 CBWD1Q9BRT8 395 aa20.81■□□□□ 0.92
CHPF2-203ENST00000482173 FGFBP2Q9BYJ0 223 aa20.81■□□□□ 0.92
CHPF2-203ENST00000482173 DDX43Q9NXZ2 648 aaKnown RBP20.81■□□□□ 0.92
CHPF2-203ENST00000482173 L1RE1Q9UN81 338 aa20.81■□□□□ 0.92
CHPF2-203ENST00000482173 MAGED2Q9UNF1 606 aaPredicted RBP20.81■□□□□ 0.92
CHPF2-203ENST00000482173 KIF26AQ9ULI4 1882 aaPredicted RBP20.81■□□□□ 0.92
CHPF2-203ENST00000482173 A0A087X0B3 334 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 FRMD3A2A2Y4 597 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 PRR5-ARHGAP8B1AHC4 643 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 EXTL3O43909 919 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 PRPF6O94906 941 aaKnown RBP20.8■□□□□ 0.92
CHPF2-203ENST00000482173 KRT19P08727 400 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 CSH1P0DML2 217 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 CSH2P0DML3 217 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 ACAT1P24752 427 aaKnown RBP20.8■□□□□ 0.92
CHPF2-203ENST00000482173 AVPR1AP37288 418 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 GPR15P49685 360 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 ARHGAP8P85298 464 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 MYL7Q01449 175 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 CCINQ13939 588 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 SIM2Q14190 667 aaPredicted RBP20.8■□□□□ 0.92
CHPF2-203ENST00000482173 SDHAF4Q5VUM1 108 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 LAIR1Q6GTX8 287 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 TMEM86AQ8N2M4 240 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 PDILTQ8N807 584 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 MRPS31Q92665 395 aaKnown RBP20.8■□□□□ 0.92
CHPF2-203ENST00000482173 TMEM206Q9H813 350 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 PDE11AQ9HCR9 933 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 PARD6AQ9NPB6 346 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 ITGA11Q9UKX5 1188 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 MTMR6Q9Y217 621 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 DENND4CQ5VZ89 1909 aa20.8■□□□□ 0.92
CHPF2-203ENST00000482173 ZNF638Q14966 1978 aaKnown RBP20.79■□□□□ 0.92
CHPF2-203ENST00000482173 K7ESF4 209 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 HRO43593 1189 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 PAPSS2O95340 614 aaPredicted RBP20.79■□□□□ 0.92
CHPF2-203ENST00000482173 CYP2F1P24903 491 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 DDX6P26196 483 aaKnown RBP eCLIP20.79■□□□□ 0.92
CHPF2-203ENST00000482173 RBP5P82980 135 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 SPEM2Q0P670 501 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 DDR2Q16832 855 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 TXNDC8Q6A555 127 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 HEATR6Q6AI08 1181 aaKnown RBP20.79■□□□□ 0.92
CHPF2-203ENST00000482173 LONP2Q86WA8 852 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 CCDC65Q8IXS2 484 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 SYNPOQ8N3V7 929 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 STKLD1Q8NE28 680 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 CXorf38Q8TB03 319 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 LEO1Q8WVC0 666 aaPredicted RBP20.79■□□□□ 0.92
CHPF2-203ENST00000482173 USP13Q92995 863 aaPredicted RBP20.79■□□□□ 0.92
CHPF2-203ENST00000482173 FAM83CQ9BQN1 747 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 TDP1Q9NUW8 608 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 C2orf42Q9NWW7 574 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 GDAP2Q9NXN4 497 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 GTF3C4Q9UKN8 822 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 CCL26Q9Y258 94 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 SNX9Q9Y5X1 595 aa20.79■□□□□ 0.92
CHPF2-203ENST00000482173 MORC2Q9Y6X9 1032 aaPredicted RBP20.79■□□□□ 0.92
CHPF2-203ENST00000482173 CNR2P34972 360 aa20.78■□□□□ 0.92
CHPF2-203ENST00000482173 ATXN1P54253 815 aaKnown RBP20.78■□□□□ 0.92
CHPF2-203ENST00000482173 RPL10AP62906 217 aaKnown RBP20.78■□□□□ 0.92
CHPF2-203ENST00000482173 SRSF5Q13243 272 aaKnown RBP20.78■□□□□ 0.92
CHPF2-203ENST00000482173 RUNX3Q13761 415 aa20.78■□□□□ 0.92
CHPF2-203ENST00000482173 INTS6LQ5JSJ4 861 aaKnown RBP20.78■□□□□ 0.92
CHPF2-203ENST00000482173 MON1AQ86VX9 555 aa20.78■□□□□ 0.92
CHPF2-203ENST00000482173 GPD1LQ8N335 351 aa20.78■□□□□ 0.92
CHPF2-203ENST00000482173 INTS4Q96HW7 963 aaKnown RBP20.78■□□□□ 0.92
CHPF2-203ENST00000482173 MTMR12Q9C0I1 747 aa20.78■□□□□ 0.92
CHPF2-203ENST00000482173 ZSCAN16Q9H4T2 348 aaPredicted RBP20.78■□□□□ 0.92
CHPF2-203ENST00000482173 EBF3Q9H4W6 596 aa20.78■□□□□ 0.92
CHPF2-203ENST00000482173 ABCB6Q9NP58 842 aa20.78■□□□□ 0.92
CHPF2-203ENST00000482173 FOXD4L1Q9NU39 408 aa20.78■□□□□ 0.92
CHPF2-203ENST00000482173 CDV3Q9UKY7 258 aaKnown RBP20.78■□□□□ 0.92
CHPF2-203ENST00000482173 SOBPA7XYQ1 873 aa20.77■□□□□ 0.92
CHPF2-203ENST00000482173 RETP07949 1114 aa20.77■□□□□ 0.92
CHPF2-203ENST00000482173 TMEM191BP0C7N4 346 aa20.77■□□□□ 0.92
CHPF2-203ENST00000482173 LHX1P48742 406 aa20.77■□□□□ 0.92
CHPF2-203ENST00000482173 TRIM68Q6AZZ1 485 aa20.77■□□□□ 0.92
CHPF2-203ENST00000482173 OSTM1Q86WC4 334 aa20.77■□□□□ 0.92
CHPF2-203ENST00000482173 TOP6BLQ8N6T0 577 aa20.77■□□□□ 0.92
CHPF2-203ENST00000482173 PKMYT1Q99640 499 aa20.77■□□□□ 0.92
CHPF2-203ENST00000482173 KIF9Q9HAQ2 790 aa20.77■□□□□ 0.92
CHPF2-203ENST00000482173 HPS4Q9NQG7 708 aa20.77■□□□□ 0.92
CHPF2-203ENST00000482173 UXTQ9UBK9 157 aaPredicted RBP20.77■□□□□ 0.92
CHPF2-203ENST00000482173 SIX4Q9UIU6 781 aa20.77■□□□□ 0.92
CHPF2-203ENST00000482173 R3HCC1Q9Y3T6 440 aaKnown RBP20.77■□□□□ 0.92
CHPF2-203ENST00000482173 HCRTO43612 131 aa20.76■□□□□ 0.91
CHPF2-203ENST00000482173 STK38Q15208 465 aa20.76■□□□□ 0.91
CHPF2-203ENST00000482173 LMBRD2Q68DH5 695 aaPredicted RBP20.76■□□□□ 0.91
CHPF2-203ENST00000482173 CC2D1AQ6P1N0 951 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms