RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 NDUFA10O95299 355 aa6.93□□□□□ -1.3
SF3B1-210ENST00000482158 CYP2C9P11712 490 aa6.93□□□□□ -1.3
SF3B1-210ENST00000482158 IL6STP40189 918 aaPredicted RBP6.93□□□□□ -1.3
SF3B1-210ENST00000482158 CARSP49589 748 aaKnown RBP6.93□□□□□ -1.3
SF3B1-210ENST00000482158 LILRA4P59901 499 aa6.93□□□□□ -1.3
SF3B1-210ENST00000482158 SLC35G1Q2M3R5 365 aa6.93□□□□□ -1.3
SF3B1-210ENST00000482158 LCE4AQ5TA78 99 aa6.93□□□□□ -1.3
SF3B1-210ENST00000482158 CLNKQ7Z7G1 428 aa6.93□□□□□ -1.3
SF3B1-210ENST00000482158 ADGRG5Q8IZF4 528 aa6.93□□□□□ -1.3
SF3B1-210ENST00000482158 CPEB3Q8NE35 698 aaKnown RBP6.93□□□□□ -1.3
SF3B1-210ENST00000482158 GDF15Q99988 308 aa6.93□□□□□ -1.3
SF3B1-210ENST00000482158 ALOXE3Q9BYJ1 711 aa6.93□□□□□ -1.3
SF3B1-210ENST00000482158 XPNPEP3Q9NQH7 507 aa6.93□□□□□ -1.3
SF3B1-210ENST00000482158 MID2Q9UJV3 735 aa6.93□□□□□ -1.3
SF3B1-210ENST00000482158 A0A087WZ62 844 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 MYADML2A6NDP7 307 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 TMEM200CA6NKL6 621 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 TOR1BO14657 336 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 ATXN1LP0C7T5 689 aaKnown RBP6.92□□□□□ -1.3
SF3B1-210ENST00000482158 GATA3P23771 443 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 BMPR1AP36894 532 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 DGCR2P98153 550 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 BTKQ06187 659 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 SCAPQ12770 1279 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 NPY5RQ15761 445 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 ARL13BQ3SXY8 428 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 NRN1LQ496H8 165 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 PLA1AQ53H76 456 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 VGLL2Q8N8G2 317 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 ACRBPQ8NEB7 543 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 SLC25A43Q8WUT9 341 aaPredicted RBP6.92□□□□□ -1.3
SF3B1-210ENST00000482158 FUBP1Q96AE4 644 aaKnown RBP6.92□□□□□ -1.3
SF3B1-210ENST00000482158 IQCDQ96DY2 449 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 RNF31Q96EP0 1072 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 MYEOVQ96EZ4 313 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 MOGAT1Q96PD6 335 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 WDR12Q9GZL7 423 aaKnown RBP6.92□□□□□ -1.3
SF3B1-210ENST00000482158 VPS11Q9H270 941 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 UNKLQ9H9P5 680 aaKnown RBP6.92□□□□□ -1.3
SF3B1-210ENST00000482158 SERHLQ9NQF3 203 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 TRMT13Q9NUP7 481 aaKnown RBP6.92□□□□□ -1.3
SF3B1-210ENST00000482158 ITGB1BP2Q9UKP3 347 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 PCDHGB2Q9Y5G2 931 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 SPATA31A3Q5VYP0 1347 aa6.92□□□□□ -1.3
SF3B1-210ENST00000482158 KRTAP9-7A8MTY7 169 aa6.91□□□□□ -1.3
SF3B1-210ENST00000482158 LPXNO60711 386 aa6.91□□□□□ -1.3
SF3B1-210ENST00000482158 A1BGP04217 495 aa6.91□□□□□ -1.3
SF3B1-210ENST00000482158 XRCC6P12956 609 aaKnown RBP eCLIP6.91□□□□□ -1.3
SF3B1-210ENST00000482158 BTF3P20290 206 aaKnown RBP6.91□□□□□ -1.3
SF3B1-210ENST00000482158 PPM1AP35813 382 aa6.91□□□□□ -1.3
SF3B1-210ENST00000482158 VAV2P52735 878 aa6.91□□□□□ -1.3
SF3B1-210ENST00000482158 RPS7P62081 194 aaKnown RBP6.91□□□□□ -1.3
SF3B1-210ENST00000482158 HLXQ14774 488 aaPredicted RBP6.91□□□□□ -1.3
SF3B1-210ENST00000482158 SPATS1Q496A3 300 aa6.91□□□□□ -1.3
SF3B1-210ENST00000482158 RRAGBQ5VZM2 374 aa6.91□□□□□ -1.3
SF3B1-210ENST00000482158 FCRL6Q6DN72 434 aa6.91□□□□□ -1.3
SF3B1-210ENST00000482158 C1orf228Q6PIY5 440 aa6.91□□□□□ -1.3
SF3B1-210ENST00000482158 TMEM108Q6UXF1 575 aa6.91□□□□□ -1.3
SF3B1-210ENST00000482158 RHOUQ7L0Q8 258 aa6.91□□□□□ -1.3
SF3B1-210ENST00000482158 FAM9AQ8IZU1 332 aaPredicted RBP6.91□□□□□ -1.3
SF3B1-210ENST00000482158 FAM109AQ8N4B1 249 aa6.91□□□□□ -1.3
SF3B1-210ENST00000482158 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.91□□□□□ -1.3
SF3B1-210ENST00000482158 VPS37AQ8NEZ2 397 aa6.91□□□□□ -1.3
SF3B1-210ENST00000482158 TMEM125Q96AQ2 219 aa6.91□□□□□ -1.3
SF3B1-210ENST00000482158 ZNF503Q96F45 646 aa6.91□□□□□ -1.3
SF3B1-210ENST00000482158 KRTAP17-1Q9BYP8 105 aa6.91□□□□□ -1.3
SF3B1-210ENST00000482158 CDC23Q9UJX2 597 aa6.91□□□□□ -1.3
SF3B1-210ENST00000482158 CLCA1A8K7I4 914 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 H7C4K7 107 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 hCG_1984214I3L0E3 225 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 AREL1O15033 823 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 RASSF9O75901 435 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 SOAT2O75908 522 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 CDKL5O76039 1030 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 DDX6P26196 483 aaKnown RBP eCLIP6.9□□□□□ -1.3
SF3B1-210ENST00000482158 NPTX2P47972 431 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 HSPA7P48741 367 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 NDUFV1P49821 464 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 LOXL3P58215 753 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 FPGSQ05932 587 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 MPEG1Q2M385 716 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 FAM83BQ5T0W9 1011 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 SP5Q6BEB4 398 aaPredicted RBP6.9□□□□□ -1.3
SF3B1-210ENST00000482158 CATSPERGQ6ZRH7 1159 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 MICALCLQ6ZW33 695 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 RNF44Q7L0R7 432 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 KCTD20Q7Z5Y7 419 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 PLEKHG4BQ96PX9 1271 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 GALNT9Q9HCQ5 603 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 PTPRHQ9HD43 1115 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 TBC1D23Q9NUY8 699 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 DNMT3BQ9UBC3 853 aaKnown RBP6.9□□□□□ -1.3
SF3B1-210ENST00000482158 ZNF212Q9UDV6 495 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 CAPN11Q9UMQ6 739 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 FZD1Q9UP38 647 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 SHOC2Q9UQ13 582 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 MRPS17Q9Y2R5 130 aaKnown RBP6.9□□□□□ -1.3
SF3B1-210ENST00000482158 RIPOR2Q9Y4F9 1068 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 NOX1Q9Y5S8 564 aa6.9□□□□□ -1.3
SF3B1-210ENST00000482158 CENPVL1A0A0U1RR11 272 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms