RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 ZNF394Q53GI3 561 aa16.17■□□□□ 0.18
C9orf3-218ENST00000482056 PPIL6Q8IXY8 311 aa16.17■□□□□ 0.18
C9orf3-218ENST00000482056 FITM2Q8N6M3 262 aa16.17■□□□□ 0.18
C9orf3-218ENST00000482056 SLC35B2Q8TB61 432 aa16.17■□□□□ 0.18
C9orf3-218ENST00000482056 LRRC8CQ8TDW0 803 aa16.17■□□□□ 0.18
C9orf3-218ENST00000482056 SEPT1Q8WYJ6 367 aa16.17■□□□□ 0.18
C9orf3-218ENST00000482056 PRCCQ92733 491 aaPredicted RBP16.17■□□□□ 0.18
C9orf3-218ENST00000482056 HAUS1Q96CS2 278 aa16.17■□□□□ 0.18
C9orf3-218ENST00000482056 ANKRD36BP1Q96IX9 119 aa16.17■□□□□ 0.18
C9orf3-218ENST00000482056 RAB3IPQ96QF0 476 aaPredicted RBP16.17■□□□□ 0.18
C9orf3-218ENST00000482056 ACO2Q99798 780 aaKnown RBP16.17■□□□□ 0.18
C9orf3-218ENST00000482056 TMEM121Q9BTD3 319 aa16.17■□□□□ 0.18
C9orf3-218ENST00000482056 GEMIN8Q9NWZ8 242 aaKnown RBP16.17■□□□□ 0.18
C9orf3-218ENST00000482056 FETUBQ9UGM5 382 aa16.17■□□□□ 0.18
C9orf3-218ENST00000482056 MSCO60682 206 aa16.16■□□□□ 0.18
C9orf3-218ENST00000482056 GCAP28676 217 aa16.16■□□□□ 0.18
C9orf3-218ENST00000482056 FOXN2P32314 431 aa16.16■□□□□ 0.18
C9orf3-218ENST00000482056 TFAMQ00059 246 aaKnown RBP16.16■□□□□ 0.18
C9orf3-218ENST00000482056 CNTN2Q02246 1040 aa16.16■□□□□ 0.18
C9orf3-218ENST00000482056 E2F5Q15329 346 aa16.16■□□□□ 0.18
C9orf3-218ENST00000482056 CCDC142Q17RM4 750 aa16.16■□□□□ 0.18
C9orf3-218ENST00000482056 HHATQ5VTY9 493 aa16.16■□□□□ 0.18
C9orf3-218ENST00000482056 CDCA2Q69YH5 1023 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-218ENST00000482056 THNSL1Q8IYQ7 743 aa16.16■□□□□ 0.18
C9orf3-218ENST00000482056 ATP11CQ8NB49 1132 aa16.16■□□□□ 0.18
C9orf3-218ENST00000482056 DENND1AQ8TEH3 1009 aa16.16■□□□□ 0.18
C9orf3-218ENST00000482056 PCYT2Q99447 389 aa16.16■□□□□ 0.18
C9orf3-218ENST00000482056 SSU72Q9NP77 194 aaKnown RBP16.16■□□□□ 0.18
C9orf3-218ENST00000482056 WDR35Q9P2L0 1181 aa16.16■□□□□ 0.18
C9orf3-218ENST00000482056 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-218ENST00000482056 USH1CQ9Y6N9 552 aa16.16■□□□□ 0.18
C9orf3-218ENST00000482056 SIGLEC16A6NMB1 481 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 FAM189A1O60320 539 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 KRT3P12035 628 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 CA4P22748 312 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 GEMIN4P57678 1058 aaKnown RBP16.15■□□□□ 0.18
C9orf3-218ENST00000482056 KCNJ2P63252 427 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 PKN2Q16513 984 aaKnown RBP16.15■□□□□ 0.18
C9orf3-218ENST00000482056 PDK4Q16654 411 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 CYP4A22Q5TCH4 519 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 CGB2Q6NT52 195 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 SCARA5Q6ZMJ2 495 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 FAM47EQ6ZV65 393 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 FNIP1Q8TF40 1166 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 RSAD2Q8WXG1 361 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 RMDN2Q96LZ7 410 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 LHX5Q9H2C1 402 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 ARHGEF3Q9NR81 526 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 CPSF3Q9UKF6 684 aaKnown RBP16.15■□□□□ 0.18
C9orf3-218ENST00000482056 PHTF1Q9UMS5 762 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 GOLGA8SH3BPF8 625 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 DCTN3O75935 186 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 WEE2P0C1S8 567 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 TGFB3P10600 412 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 CCNB1P14635 433 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 CD19P15391 556 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 TCF7P36402 384 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-218ENST00000482056 LAMTOR4Q0VGL1 99 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 FASTKD3Q14CZ7 662 aaKnown RBP16.15■□□□□ 0.18
C9orf3-218ENST00000482056 KLHL38Q2WGJ6 581 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 WDR72Q3MJ13 1102 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 NOL9Q5SY16 702 aaKnown RBP16.15■□□□□ 0.18
C9orf3-218ENST00000482056 TXNRD3NBQ6F5E7 133 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 BBS12Q6ZW61 710 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 PYROXD1Q8WU10 500 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 ACSF2Q96CM8 615 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-218ENST00000482056 TBC1D31Q96DN5 1066 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 MPHOSPH6Q99547 160 aaKnown RBP16.15■□□□□ 0.18
C9orf3-218ENST00000482056 SYNCQ9H7C4 482 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 ZWILCHQ9H900 591 aa16.15■□□□□ 0.18
C9orf3-218ENST00000482056 ZWINTO95229 277 aa16.14■□□□□ 0.17
C9orf3-218ENST00000482056 SRGAP2CP0DJJ0 459 aa16.14■□□□□ 0.17
C9orf3-218ENST00000482056 ALADP13716 330 aa16.14■□□□□ 0.17
C9orf3-218ENST00000482056 ATP2A2P16615 1042 aaKnown RBP16.14■□□□□ 0.17
C9orf3-218ENST00000482056 ASPAP45381 313 aa16.14■□□□□ 0.17
C9orf3-218ENST00000482056 CTCFP49711 727 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-218ENST00000482056 SEPT7Q16181 437 aaKnown RBP16.14■□□□□ 0.17
C9orf3-218ENST00000482056 TMEM132AQ24JP5 1023 aa16.14■□□□□ 0.17
C9orf3-218ENST00000482056 EFHC2Q5JST6 749 aa16.14■□□□□ 0.17
C9orf3-218ENST00000482056 HP1BP3Q5SSJ5 553 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-218ENST00000482056 ANGEL2Q5VTE6 544 aaKnown RBP16.14■□□□□ 0.17
C9orf3-218ENST00000482056 MPZL3Q6UWV2 235 aa16.14■□□□□ 0.17
C9orf3-218ENST00000482056 METTL7BQ6UX53 244 aa16.14■□□□□ 0.17
C9orf3-218ENST00000482056 CAPN12Q6ZSI9 719 aa16.14■□□□□ 0.17
C9orf3-218ENST00000482056 ECHDC2Q86YB7 292 aa16.14■□□□□ 0.17
C9orf3-218ENST00000482056 WDTC1Q8N5D0 677 aa16.14■□□□□ 0.17
C9orf3-218ENST00000482056 RNF149Q8NC42 400 aa16.14■□□□□ 0.17
C9orf3-218ENST00000482056 TFAP2BQ92481 460 aa16.14■□□□□ 0.17
C9orf3-218ENST00000482056 KLRG1Q96E93 195 aa16.14■□□□□ 0.17
C9orf3-218ENST00000482056 PNMA3Q9UL41 463 aa16.14■□□□□ 0.17
C9orf3-218ENST00000482056 AFG3L2Q9Y4W6 797 aa16.14■□□□□ 0.17
C9orf3-218ENST00000482056 C3orf70A6NLC5 250 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-218ENST00000482056 UNC5CO95185 931 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 IL18RAPO95256 599 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 TSHRP16473 764 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 CCND1P24385 295 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 PSMC1P62191 440 aaKnown RBP16.13■□□□□ 0.17
C9orf3-218ENST00000482056 DYNLT1P63172 113 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 IRX3P78415 501 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-218ENST00000482056 ATP11AP98196 1134 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms