RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 ACOT1Q86TX2 421 aa22.06■■□□□ 1.12
VPS16-207ENST00000481812 PPFIBP1Q86W92 1011 aa22.06■■□□□ 1.12
VPS16-207ENST00000481812 MYCBPAPQ8TBZ2 947 aa22.06■■□□□ 1.12
VPS16-207ENST00000481812 C2orf15Q8WU43 125 aaKnown RBP22.06■■□□□ 1.12
VPS16-207ENST00000481812 PPP2R3CQ969Q6 453 aa22.06■■□□□ 1.12
VPS16-207ENST00000481812 CRTAC1Q9NQ79 661 aa22.06■■□□□ 1.12
VPS16-207ENST00000481812 LUC7L2Q9Y383 392 aaKnown RBP22.06■■□□□ 1.12
VPS16-207ENST00000481812 PTPRDP23468 1912 aa22.06■■□□□ 1.12
VPS16-207ENST00000481812 HCRTO43612 131 aa22.05■■□□□ 1.12
VPS16-207ENST00000481812 TPM1P09493 284 aa22.05■■□□□ 1.12
VPS16-207ENST00000481812 CCDC172P0C7W6 258 aa22.05■■□□□ 1.12
VPS16-207ENST00000481812 VDRP11473 427 aa22.05■■□□□ 1.12
VPS16-207ENST00000481812 RPL17P18621 184 aaKnown RBP22.05■■□□□ 1.12
VPS16-207ENST00000481812 CLCN1P35523 988 aa22.05■■□□□ 1.12
VPS16-207ENST00000481812 ROR1Q01973 937 aa22.05■■□□□ 1.12
VPS16-207ENST00000481812 ZNF394Q53GI3 561 aa22.05■■□□□ 1.12
VPS16-207ENST00000481812 LRRTM3Q86VH5 581 aa22.05■■□□□ 1.12
VPS16-207ENST00000481812 ZNF461Q8TAF7 563 aa22.05■■□□□ 1.12
VPS16-207ENST00000481812 SYN2Q92777 582 aaPredicted RBP22.05■■□□□ 1.12
VPS16-207ENST00000481812 FUBP3Q96I24 572 aaKnown RBP eCLIP22.05■■□□□ 1.12
VPS16-207ENST00000481812 TMEM209Q96SK2 561 aa22.05■■□□□ 1.12
VPS16-207ENST00000481812 CDCA3Q99618 268 aaPredicted RBP22.05■■□□□ 1.12
VPS16-207ENST00000481812 DPEP3Q9H4B8 488 aa22.05■■□□□ 1.12
VPS16-207ENST00000481812 AIPL1Q9NZN9 384 aa22.05■■□□□ 1.12
VPS16-207ENST00000481812 HSFX1Q9UBD0 423 aa22.05■■□□□ 1.12
VPS16-207ENST00000481812 GTF3C4Q9UKN8 822 aa22.05■■□□□ 1.12
VPS16-207ENST00000481812 WDR27A2RRH5 827 aa22.04■■□□□ 1.12
VPS16-207ENST00000481812 MYBPHLA2RUH7 354 aa22.04■■□□□ 1.12
VPS16-207ENST00000481812 ADAM12O43184 909 aa22.04■■□□□ 1.12
VPS16-207ENST00000481812 ATP2C2O75185 946 aa22.04■■□□□ 1.12
VPS16-207ENST00000481812 CPB1P15086 417 aa22.04■■□□□ 1.12
VPS16-207ENST00000481812 KLRC2P26717 231 aa22.04■■□□□ 1.12
VPS16-207ENST00000481812 CASP14P31944 242 aa22.04■■□□□ 1.12
VPS16-207ENST00000481812 CA8P35219 290 aa22.04■■□□□ 1.12
VPS16-207ENST00000481812 PTK2Q05397 1052 aa22.04■■□□□ 1.12
VPS16-207ENST00000481812 ARID5BQ14865 1188 aa22.04■■□□□ 1.12
VPS16-207ENST00000481812 STILQ15468 1287 aa22.04■■□□□ 1.12
VPS16-207ENST00000481812 ARHGAP17Q68EM7 881 aa22.04■■□□□ 1.12
VPS16-207ENST00000481812 LILRA6Q6PI73 481 aa22.04■■□□□ 1.12
VPS16-207ENST00000481812 C4orf50Q6ZRC1 276 aa22.04■■□□□ 1.12
VPS16-207ENST00000481812 HEXIM2Q96MH2 286 aaKnown RBP22.04■■□□□ 1.12
VPS16-207ENST00000481812 NSUN3Q9H649 340 aaKnown RBP22.04■■□□□ 1.12
VPS16-207ENST00000481812 IMPACTQ9P2X3 320 aa22.04■■□□□ 1.12
VPS16-207ENST00000481812 AFF4Q9UHB7 1163 aaKnown RBP22.04■■□□□ 1.12
VPS16-207ENST00000481812 PLXNA3P51805 1871 aa22.03■■□□□ 1.12
VPS16-207ENST00000481812 CYP26A1O43174 497 aa22.03■■□□□ 1.12
VPS16-207ENST00000481812 ATF2P15336 505 aa22.03■■□□□ 1.12
VPS16-207ENST00000481812 FERP16591 822 aa22.03■■□□□ 1.12
VPS16-207ENST00000481812 USP8P40818 1118 aa22.03■■□□□ 1.12
VPS16-207ENST00000481812 FXR1P51114 621 aaKnown RBP eCLIP22.03■■□□□ 1.12
VPS16-207ENST00000481812 PSMC1P62191 440 aaKnown RBP22.03■■□□□ 1.12
VPS16-207ENST00000481812 CFAP221Q4G0U5 840 aa22.03■■□□□ 1.12
VPS16-207ENST00000481812 SLC39A12Q504Y0 691 aa22.03■■□□□ 1.12
VPS16-207ENST00000481812 SGO2Q562F6 1265 aa22.03■■□□□ 1.12
VPS16-207ENST00000481812 RTL10Q7L3V2 364 aa22.03■■□□□ 1.12
VPS16-207ENST00000481812 SPPL2BQ8TCT7 592 aa22.03■■□□□ 1.12
VPS16-207ENST00000481812 HNRNPABQ99729 332 aaKnown RBP22.03■■□□□ 1.12
VPS16-207ENST00000481812 ABCB6Q9NP58 842 aa22.03■■□□□ 1.12
VPS16-207ENST00000481812 PCDHGC5Q9Y5F6 944 aa22.03■■□□□ 1.12
VPS16-207ENST00000481812 LRRC53A6NM62 1247 aa22.02■■□□□ 1.12
VPS16-207ENST00000481812 CLASP2O75122 1294 aaKnown RBP22.02■■□□□ 1.12
VPS16-207ENST00000481812 OR4Q2P0C623 313 aa22.02■■□□□ 1.12
VPS16-207ENST00000481812 HNRNPH3P31942 346 aaKnown RBP22.02■■□□□ 1.12
VPS16-207ENST00000481812 KRT9P35527 623 aa22.02■■□□□ 1.12
VPS16-207ENST00000481812 CLCN4P51793 760 aa22.02■■□□□ 1.12
VPS16-207ENST00000481812 CNGA2Q16280 664 aa22.02■■□□□ 1.12
VPS16-207ENST00000481812 MEA1Q16626 185 aa22.02■■□□□ 1.12
VPS16-207ENST00000481812 DUSP6Q16828 381 aa22.02■■□□□ 1.12
VPS16-207ENST00000481812 MDH1BQ5I0G3 518 aa22.02■■□□□ 1.12
VPS16-207ENST00000481812 CNGA4Q8IV77 575 aa22.02■■□□□ 1.12
VPS16-207ENST00000481812 HDAC7Q8WUI4 952 aa22.02■■□□□ 1.12
VPS16-207ENST00000481812 CPLX3Q8WVH0 158 aa22.02■■□□□ 1.12
VPS16-207ENST00000481812 CYFIP2Q96F07 1278 aa22.02■■□□□ 1.12
VPS16-207ENST00000481812 PCED1BQ96HM7 432 aa22.02■■□□□ 1.12
VPS16-207ENST00000481812 GAS2L1Q99501 681 aaPredicted RBP22.02■■□□□ 1.12
VPS16-207ENST00000481812 TLE6Q9H808 572 aa22.02■■□□□ 1.12
VPS16-207ENST00000481812 TMLHEQ9NVH6 421 aa22.02■■□□□ 1.12
VPS16-207ENST00000481812 PCDHB5Q9Y5E4 795 aa22.02■■□□□ 1.12
VPS16-207ENST00000481812 MTCH2Q9Y6C9 303 aa22.02■■□□□ 1.12
VPS16-207ENST00000481812 PRRC2BQ5JSZ5 2229 aaKnown RBP22.02■■□□□ 1.11
VPS16-207ENST00000481812 MYH10P35580 1976 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 MTMR11A4FU01 709 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 GFPT2O94808 682 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 PNMA6AP0CW24 399 aaPredicted RBP22.01■■□□□ 1.11
VPS16-207ENST00000481812 GNA15P30679 374 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 PRKCIP41743 596 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 MAGEA11P43364 429 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 ARPP19P56211 112 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 ORC1Q13415 861 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 SFMBT2Q5VUG0 894 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 RNF19BQ6ZMZ0 732 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 IRF2BP2Q7Z5L9 587 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 ZNF677Q86XU0 584 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 GLYCTKQ8IVS8 523 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 C12orf29Q8N999 325 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 OR8K1Q8NGG5 319 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 SLC22A17Q8WUG5 538 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 ZNF606Q8WXB4 792 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 MYLPFQ96A32 169 aa22.01■■□□□ 1.11
VPS16-207ENST00000481812 DNAJC7Q99615 494 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms