RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	ANXA1	P04083	346 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	GNAI3	P08754	354 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	NDUFB7	P17568	137 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	PRDX5	P30044	214 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	CYP2C19	P33261	490 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	ARHGAP25	P42331	645 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	NR4A2	P43354	598 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	MMP13	P45452	471 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	NDUFV1	P49821	464 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	FXR1	P51114	621 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	GNAI1	P63096	354 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	HABP2	Q14520	560 aa	Predicted RBP	4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	RABEP1	Q15276	862 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	TAF2	Q6P1X5	1199 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	ZNF551	Q7Z340	670 aa	Predicted RBP	4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	TNPO1	Q92973	898 aa	Known RBP	4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	AMBRA1	Q9C0C7	1298 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	VPS16	Q9H269	839 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	PCDH12	Q9NPG4	1184 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	ARHGEF3	Q9NR81	526 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	ETAA1	Q9NY74	926 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	MTMR4	Q9NYA4	1195 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	COL4A3BP	Q9Y5P4	624 aa		4.23	□□□□□ -1.73
CCNL1-223	ENST00000481173	PRRT4	C9JH25	899 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173		H3BNC9	293 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	ZNF213	O14771	459 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	TRIAP1	O43715	76 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	SNUPN	O95149	360 aa	Known RBP	4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	TUBB4A	P04350	444 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	PDHA1	P08559	390 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	SNHG28	P0DPA3	235 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	RECQL	P46063	649 aa	Predicted RBP	4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	PIK3CG	P48736	1102 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	BMPR2	Q13873	1038 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	SLC29A4	Q7RTT9	530 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	HEATR3	Q7Z4Q2	680 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	FAM90A1	Q86YD7	464 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	PDSS2	Q86YH6	399 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	CNGA4	Q8IV77	575 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	FANCB	Q8NB91	859 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	PSD4	Q8NDX1	1056 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	GNL3L	Q9NVN8	582 aa	Known RBP	4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	SIDT1	Q9NXL6	827 aa	Known RBP	4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	CFAP97	Q9P2B7	532 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	ABCF2	Q9UG63	623 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	POLH	Q9Y253	713 aa		4.22	□□□□□ -1.73
CCNL1-223	ENST00000481173	SMIM35	A0A1B0GVV1	85 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	INSIG1	O15503	277 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	AHSG	P02765	367 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	FAM163B	P0C2L3	166 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	MAP2K6	P52564	334 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	HK3	P52790	923 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	NOG	Q13253	232 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	BOP1	Q14137	746 aa	Known RBP	4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	RBM20	Q5T481	1227 aa	Known RBP	4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	USP45	Q70EL2	814 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	CATIP	Q7Z7H3	387 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	USP37	Q86T82	979 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	PRR18	Q8N4B5	295 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	KLHDC4	Q8TBB5	520 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	ADAMTS15	Q8TE58	950 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	HMCES	Q96FZ2	354 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	CNPPD1	Q9BV87	410 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	PRSS22	Q9GZN4	317 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	GPR35	Q9HC97	309 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	TUBA8	Q9NY65	449 aa	Predicted RBP	4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	LRP12	Q9Y561	859 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	PCDHA1	Q9Y5I3	950 aa		4.21	□□□□□ -1.74
CCNL1-223	ENST00000481173	IL33	O95760	270 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	FTL	P02792	175 aa	Predicted RBP	4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	POU2F2	P09086	479 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	RARB	P10826	455 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	TOB1	P50616	345 aa	Predicted RBP	4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	RAPGEF1	Q13905	1077 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	KIF22	Q14807	665 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	LRRC41	Q15345	812 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	BRDT	Q58F21	947 aa	Predicted RBP	4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	VPS53	Q5VIR6	699 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	PPP1R3B	Q86XI6	285 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	PCSK9	Q8NBP7	692 aa	Known RBP	4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	TBC1D5	Q92609	795 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	OSBPL9	Q96SU4	736 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	MRPL46	Q9H2W6	279 aa	Known RBP	4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	SERHL	Q9NQF3	203 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	PDGFC	Q9NRA1	345 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	HOMER2	Q9NSB8	354 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	LMBRD1	Q9NUN5	540 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	RLIM	Q9NVW2	624 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	LUC7L2	Q9Y383	392 aa	Known RBP	4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	SPEF1	Q9Y4P9	236 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	RAD54B	Q9Y620	910 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	SPATA31A3	Q5VYP0	1347 aa		4.2	□□□□□ -1.74
CCNL1-223	ENST00000481173	CCDC187	A0A096LP49	1063 aa		4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173		H0YIZ8	118 aa		4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173		M0QYG6	137 aa		4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	DNAJB5	O75953	348 aa		4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	FTH1P19	P0C7X4	201 aa		4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	ITGAL	P20701	1170 aa		4.19	□□□□□ -1.74
CCNL1-223	ENST00000481173	CCDC157	Q569K6	752 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms