RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.67■□□□□ 0.58
UPF3A-206ENST00000480362 SF3B1O75533 1304 aaKnown RBP eCLIP18.67■□□□□ 0.58
UPF3A-206ENST00000480362 RCCD1A6NED2 376 aa18.66■□□□□ 0.58
UPF3A-206ENST00000480362 MICAL2O94851 1124 aa18.66■□□□□ 0.58
UPF3A-206ENST00000480362 FTLP02792 175 aaPredicted RBP18.66■□□□□ 0.58
UPF3A-206ENST00000480362 H2AFZP0C0S5 128 aa18.66■□□□□ 0.58
UPF3A-206ENST00000480362 PCSK1P29120 753 aa18.66■□□□□ 0.58
UPF3A-206ENST00000480362 STILQ15468 1287 aa18.66■□□□□ 0.58
UPF3A-206ENST00000480362 C9orf50Q5SZB4 431 aa18.66■□□□□ 0.58
UPF3A-206ENST00000480362 KIAA0319Q5VV43 1072 aa18.66■□□□□ 0.58
UPF3A-206ENST00000480362 ARHGAP17Q68EM7 881 aa18.66■□□□□ 0.58
UPF3A-206ENST00000480362 LCLAT1Q6UWP7 414 aa18.66■□□□□ 0.58
UPF3A-206ENST00000480362 H2AFVQ71UI9 128 aa18.66■□□□□ 0.58
UPF3A-206ENST00000480362 CEP57Q86XR8 500 aa18.66■□□□□ 0.58
UPF3A-206ENST00000480362 SLC39A11Q8N1S5 342 aa18.66■□□□□ 0.58
UPF3A-206ENST00000480362 CPA5Q8WXQ8 436 aa18.66■□□□□ 0.58
UPF3A-206ENST00000480362 ACBD6Q9BR61 282 aa18.66■□□□□ 0.58
UPF3A-206ENST00000480362 LACRTQ9GZZ8 138 aa18.66■□□□□ 0.58
UPF3A-206ENST00000480362 LHX5Q9H2C1 402 aa18.66■□□□□ 0.58
UPF3A-206ENST00000480362 CRTAC1Q9NQ79 661 aa18.66■□□□□ 0.58
UPF3A-206ENST00000480362 TSC2P49815 1807 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 TLL1O43897 1013 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 OAZ2O95190 189 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 ABL1P00519 1130 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 FGFR3P22607 806 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 ARHGAP25P42331 645 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 GALCP54803 685 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 NOMO3P69849 1222 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 GOLGA7BQ2TAP0 167 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 NAA35Q5VZE5 725 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.65■□□□□ 0.58
UPF3A-206ENST00000480362 TAS1R1Q7RTX1 841 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 TXLNBQ8N3L3 684 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 WDTC1Q8N5D0 677 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 TMEM35BQ8NCS4 154 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 UBA3Q8TBC4 463 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 B3GALT6Q96L58 329 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 LZTFL1Q9NQ48 299 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 AAASQ9NRG9 546 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 SPG21Q9NZD8 308 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 TSPAN16Q9UKR8 245 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 INTUQ9ULD6 942 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 CEP83Q9Y592 693 aa18.65■□□□□ 0.58
UPF3A-206ENST00000480362 MYBPHLA2RUH7 354 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 CARNS1A5YM72 827 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 GOLGA6L9A6NEM1 432 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 M0QYV0 167 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 PJA2O43164 708 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 LSM8O95777 96 aaKnown RBP18.64■□□□□ 0.57
UPF3A-206ENST00000480362 EFEMP2O95967 443 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 CCDC130P13994 396 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 ADORA2BP29275 332 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 CDH5P33151 784 aaPredicted RBP18.64■□□□□ 0.57
UPF3A-206ENST00000480362 CENPCQ03188 943 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 KIF5AQ12840 1032 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 SHHQ15465 462 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 CCDC142Q17RM4 750 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 MDH1BQ5I0G3 518 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 INTS6LQ5JSJ4 861 aaKnown RBP18.64■□□□□ 0.57
UPF3A-206ENST00000480362 VARS2Q5ST30 1063 aaKnown RBP18.64■□□□□ 0.57
UPF3A-206ENST00000480362 ZNF662Q6ZS27 426 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 C1orf131Q8NDD1 294 aaKnown RBP18.64■□□□□ 0.57
UPF3A-206ENST00000480362 OR10T2Q8NGX3 314 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 TMEM209Q96SK2 561 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 ZNF518BQ9C0D4 1074 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 GTF3C4Q9UKN8 822 aa18.64■□□□□ 0.57
UPF3A-206ENST00000480362 ANKRD62A6NC57 917 aa18.63■□□□□ 0.57
UPF3A-206ENST00000480362 ABCB4P21439 1286 aa18.63■□□□□ 0.57
UPF3A-206ENST00000480362 NSFP46459 744 aaKnown RBP18.63■□□□□ 0.57
UPF3A-206ENST00000480362 MRPL58Q14197 206 aaKnown RBP18.63■□□□□ 0.57
UPF3A-206ENST00000480362 ARHGAP29Q52LW3 1261 aa18.63■□□□□ 0.57
UPF3A-206ENST00000480362 SLC2A14Q8TDB8 520 aa18.63■□□□□ 0.57
UPF3A-206ENST00000480362 SP7Q8TDD2 431 aaPredicted RBP18.63■□□□□ 0.57
UPF3A-206ENST00000480362 TMEM169Q96HH4 297 aa18.63■□□□□ 0.57
UPF3A-206ENST00000480362 RNPC3Q96LT9 517 aaKnown RBP18.63■□□□□ 0.57
UPF3A-206ENST00000480362 HNRNPABQ99729 332 aaKnown RBP18.63■□□□□ 0.57
UPF3A-206ENST00000480362 MED10Q9BTT4 135 aa18.63■□□□□ 0.57
UPF3A-206ENST00000480362 TTPALQ9BTX7 342 aa18.63■□□□□ 0.57
UPF3A-206ENST00000480362 HESX1Q9UBX0 185 aa18.63■□□□□ 0.57
UPF3A-206ENST00000480362 TRIM10Q9UDY6 481 aa18.63■□□□□ 0.57
UPF3A-206ENST00000480362 PCDHB12Q9Y5F1 795 aa18.63■□□□□ 0.57
UPF3A-206ENST00000480362 DUSP10Q9Y6W6 482 aa18.63■□□□□ 0.57
UPF3A-206ENST00000480362 LCHNA4D1U4 455 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 H7C4K7 107 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 CLDN5O00501 218 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 KRT86O43790 486 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 ZNF500O60304 480 aaPredicted RBP18.62■□□□□ 0.57
UPF3A-206ENST00000480362 TMEM253P0C7T8 217 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 GPD2P43304 727 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 RABGGTBP53611 331 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 TSPY1Q01534 308 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 USP41Q3LFD5 358 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 CTXN3Q4LDR2 81 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 PKDCCQ504Y2 493 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 RTP2Q5QGT7 225 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 PPP1R2P3Q6NXS1 205 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 FAM171BQ6P995 826 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 PAQR9Q6ZVX9 377 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 LRRTM3Q86VH5 581 aa18.62■□□□□ 0.57
UPF3A-206ENST00000480362 TTC30AQ86WT1 665 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms