RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 ADAM33Q9BZ11 813 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 EBF3Q9H4W6 596 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 MRPL47Q9HD33 250 aaKnown RBP14.23□□□□□ -0.13
C9orf78-205ENST00000480023 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.23□□□□□ -0.13
C9orf78-205ENST00000480023 GALNT8Q9NY28 637 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 ARMCX1Q9P291 453 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 SRP68Q9UHB9 627 aaKnown RBP14.23□□□□□ -0.13
C9orf78-205ENST00000480023 PPM1HQ9ULR3 514 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 SUGT1Q9Y2Z0 365 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 PCDHB2Q9Y5E7 798 aa14.23□□□□□ -0.13
C9orf78-205ENST00000480023 STRCQ7RTU9 1775 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 COL16A1Q07092 1604 aaPredicted RBP14.22□□□□□ -0.13
C9orf78-205ENST00000480023 CSDE1O75534 798 aaKnown RBP14.22□□□□□ -0.13
C9orf78-205ENST00000480023 ASLP04424 464 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 HLA-DOAP06340 250 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 ETS1P14921 441 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 VAV1P15498 845 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 ITGA9Q13797 1035 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 MAP7Q14244 749 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 SNRNP35Q16560 246 aaKnown RBP14.22□□□□□ -0.13
C9orf78-205ENST00000480023 SPATA24Q86W54 205 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 FBXO27Q8NI29 283 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 TMC2Q8TDI7 906 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 TAS1R2Q8TE23 839 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 PYROXD1Q8WU10 500 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 FAM172AQ8WUF8 416 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 CPA5Q8WXQ8 436 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 GMCL1Q96IK5 515 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 VCPIP1Q96JH7 1222 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 C7orf26Q96N11 449 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 SLITRK1Q96PX8 696 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 C12orf65Q9H3J6 166 aaKnown RBP14.22□□□□□ -0.13
C9orf78-205ENST00000480023 UNC45AQ9H3U1 944 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 PREBQ9HCU5 417 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 TAGLN3Q9UI15 199 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 SSX2IPQ9Y2D8 614 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 PPME1Q9Y570 386 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 SNCAIPQ9Y6H5 919 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 RPS6KL1Q9Y6S9 549 aa14.22□□□□□ -0.13
C9orf78-205ENST00000480023 ZC3H11AO75152 810 aaKnown RBP eCLIP14.21□□□□□ -0.13
C9orf78-205ENST00000480023 FAM155BO75949 473 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 SSTR1P30872 391 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 GRIA2P42262 883 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 ASPHQ12797 758 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 MAMLD1Q13495 774 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 SH2D4BQ5SQS7 431 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 LIN9Q5TKA1 542 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 PLEKHA7Q6IQ23 1121 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 LLGL2Q6P1M3 1020 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 ALYREFQ86V81 257 aaKnown RBP14.21□□□□□ -0.13
C9orf78-205ENST00000480023 CBWD2Q8IUF1 395 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 ANKMY2Q8IV38 441 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 GMCL1P1Q8NEA9 526 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 PIP4K2CQ8TBX8 421 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 MTBPQ96DY7 904 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 WDR83Q9BRX9 315 aaKnown RBP14.21□□□□□ -0.13
C9orf78-205ENST00000480023 ZHX2Q9Y6X8 837 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 FAM237BA0A1B0GVD1 139 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 BTBD19C9JJ37 291 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 SPECC1L-ADORA2AF8WAN1 911 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 GOLGA8RI6L899 631 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 SPATA31D3P0C874 917 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 KRT5P13647 590 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 UQCRBP14927 111 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 BGNP21810 368 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 STIP1P31948 543 aaKnown RBP14.21□□□□□ -0.13
C9orf78-205ENST00000480023 MAGEA8P43361 318 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 CPA2P48052 419 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 SNAP25P60880 206 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 MED21Q13503 144 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 HSF5Q4G112 596 aaPredicted RBP14.21□□□□□ -0.13
C9orf78-205ENST00000480023 LRRC38Q5VT99 294 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 C1orf146Q5VVC0 180 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 SPATA31D4Q6ZUB0 917 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 C3orf62Q6ZUJ4 267 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 RAPH1Q70E73 1250 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 DHDDSQ86SQ9 333 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 ALG13Q9NP73 1137 aaKnown RBP14.21□□□□□ -0.13
C9orf78-205ENST00000480023 KCNQ5Q9NR82 932 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 DNAAF2Q9NVR5 837 aaKnown RBP14.21□□□□□ -0.13
C9orf78-205ENST00000480023 PTTG2Q9NZH5 202 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 GGA1Q9UJY5 639 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 SCINQ9Y6U3 715 aa14.21□□□□□ -0.13
C9orf78-205ENST00000480023 IQANK1A0A1B0GTG1 560 aa14.2□□□□□ -0.14
C9orf78-205ENST00000480023 C2orf71A6NGG8 1288 aa14.2□□□□□ -0.14
C9orf78-205ENST00000480023 BANF1O75531 89 aa14.2□□□□□ -0.14
C9orf78-205ENST00000480023 RPS6KA4O75676 772 aa14.2□□□□□ -0.14
C9orf78-205ENST00000480023 TMCC1O94876 653 aa14.2□□□□□ -0.14
C9orf78-205ENST00000480023 MT-ND3P03897 115 aa14.2□□□□□ -0.14
C9orf78-205ENST00000480023 ENO1P06733 434 aaKnown RBP14.2□□□□□ -0.14
C9orf78-205ENST00000480023 HARSP12081 509 aaKnown RBP14.2□□□□□ -0.14
C9orf78-205ENST00000480023 KRT10P13645 584 aa14.2□□□□□ -0.14
C9orf78-205ENST00000480023 ETS2P15036 469 aa14.2□□□□□ -0.14
C9orf78-205ENST00000480023 RGS2P41220 211 aa14.2□□□□□ -0.14
C9orf78-205ENST00000480023 BPIFB4P59827 614 aa14.2□□□□□ -0.14
C9orf78-205ENST00000480023 ENPEPQ07075 957 aa14.2□□□□□ -0.14
C9orf78-205ENST00000480023 USP4Q13107 963 aa14.2□□□□□ -0.14
C9orf78-205ENST00000480023 R3HDM1Q15032 1099 aaKnown RBP14.2□□□□□ -0.14
C9orf78-205ENST00000480023 CFAP157Q5JU67 520 aa14.2□□□□□ -0.14
C9orf78-205ENST00000480023 RC3H1Q5TC82 1133 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms