RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ZNF648Q5T619 568 aaPredicted RBP6.73□□□□□ -1.33
SF3B1-209ENST00000479532 SCARA3Q6AZY7 606 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 TWF2Q6IBS0 349 aaKnown RBP6.73□□□□□ -1.33
SF3B1-209ENST00000479532 NOTUMQ6P988 496 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 CCDC81Q6ZN84 652 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 HAUS6Q7Z4H7 955 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 REC114Q7Z4M0 266 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 SYCP3Q8IZU3 236 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 GALNT11Q8NCW6 608 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 DBF4BQ8NFT6 615 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 GPBAR1Q8TDU6 330 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 CPLX3Q8WVH0 158 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 TMEM40Q8WWA1 233 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 GSDMAQ96QA5 445 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 ACCSQ96QU6 501 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 NTPCRQ9BSD7 190 aaKnown RBP6.73□□□□□ -1.33
SF3B1-209ENST00000479532 MRPL4Q9BYD3 311 aaKnown RBP6.73□□□□□ -1.33
SF3B1-209ENST00000479532 NUP62CLQ9H1M0 184 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 CLSTN2Q9H4D0 955 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 ST6GALNAC4Q9H4F1 302 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 TMEM206Q9H813 350 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 POLD4Q9HCU8 107 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 ERVK-5Q9HDB9 667 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 AGPAT5Q9NUQ2 364 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 ARHGAP28Q9P2N2 729 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 PPT2Q9UMR5 302 aa6.73□□□□□ -1.33
SF3B1-209ENST00000479532 MICAL3Q7RTP6 2002 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 CTIFO43310 598 aaKnown RBP6.72□□□□□ -1.33
SF3B1-209ENST00000479532 TSPAN1O60635 241 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 RHOBTB3O94955 611 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 CTSBP07858 339 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 ACRP10323 421 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 FGFR4P22455 802 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 NMT1P30419 496 aaKnown RBP6.72□□□□□ -1.33
SF3B1-209ENST00000479532 GTF2BQ00403 316 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 RPL6Q02878 288 aaKnown RBP6.72□□□□□ -1.33
SF3B1-209ENST00000479532 PNOCQ13519 176 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 DCAF4L1Q3SXM0 396 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 CCDC183Q5T5S1 534 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 ATF7IP2Q5U623 682 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 SLFN12LQ6IEE8 588 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 ZPBP2Q6X784 338 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 ZNF365Q70YC5 407 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 OTOP2Q7RTS6 562 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 ZNF720Q7Z2F6 126 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 MAP4K3Q8IVH8 894 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 TP53INP2Q8IXH6 220 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 ARMC10Q8N2F6 343 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 TRIML1Q8N9V2 468 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 KLHL23Q8NBE8 558 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 TMEM161BQ8NDZ6 487 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 SHKBP1Q8TBC3 707 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 HERVK_113Q902F9 699 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 KCNN1Q92952 543 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 PGBD4Q96DM1 585 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 RNPC3Q96LT9 517 aaKnown RBP6.72□□□□□ -1.33
SF3B1-209ENST00000479532 SLC9A7Q96T83 725 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 ADAM2Q99965 735 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 TCHPQ9BT92 498 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 KIFC3Q9BVG8 833 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 SRRTQ9BXP5 876 aaKnown RBP6.72□□□□□ -1.33
SF3B1-209ENST00000479532 FZD8Q9H461 694 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 CCDC86Q9H6F5 360 aaKnown RBP6.72□□□□□ -1.33
SF3B1-209ENST00000479532 AGO3Q9H9G7 860 aaKnown RBP6.72□□□□□ -1.33
SF3B1-209ENST00000479532 RGS18Q9NS28 235 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 SPTLC3Q9NUV7 552 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 TBC1D7Q9P0N9 293 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 TBX20Q9UMR3 447 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 PCDHB7Q9Y5E2 793 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 CNTNAP2Q9UHC6 1331 aa6.72□□□□□ -1.33
SF3B1-209ENST00000479532 TM4SF5O14894 197 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 HNRNPDLO14979 420 aaKnown RBP6.71□□□□□ -1.34
SF3B1-209ENST00000479532 CLDN3O15551 220 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 KIF1CO43896 1103 aaKnown RBP6.71□□□□□ -1.34
SF3B1-209ENST00000479532 CSDE1O75534 798 aaKnown RBP6.71□□□□□ -1.34
SF3B1-209ENST00000479532 TOM1L1O75674 476 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 MYBP10242 640 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 ARF4P18085 180 aaPredicted RBP6.71□□□□□ -1.34
SF3B1-209ENST00000479532 IBSPP21815 317 aaPredicted RBP6.71□□□□□ -1.34
SF3B1-209ENST00000479532 CASP1P29466 404 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 BMP8BP34820 402 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 SARSP49591 514 aaKnown RBP6.71□□□□□ -1.34
SF3B1-209ENST00000479532 SNRPFP62306 86 aaKnown RBP6.71□□□□□ -1.34
SF3B1-209ENST00000479532 CAMK4Q16566 473 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 KYAT1Q16773 422 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 ZNF568Q3ZCX4 644 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 TMEM240Q5SV17 173 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 ZNF658Q5TYW1 1059 aaPredicted RBP6.71□□□□□ -1.34
SF3B1-209ENST00000479532 SLC27A1Q6PCB7 646 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 MPZL3Q6UWV2 235 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 SPOCD1Q6ZMY3 1216 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 GK5Q6ZS86 529 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 SLC24A5Q71RS6 500 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 MYOCDQ8IZQ8 938 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 GOLGA5Q8TBA6 731 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 PHOSPHO2Q8TCD6 241 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 RSPH1Q8WYR4 309 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 ANAPC16Q96DE5 110 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 CPB2Q96IY4 423 aa6.71□□□□□ -1.34
SF3B1-209ENST00000479532 FERD3LQ96RJ6 166 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms