RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 SYPP08247 313 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 MAOBP27338 520 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 CDC25CP30307 473 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 TIE1P35590 1138 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 DPP6P42658 865 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 EXOSC10Q01780 885 aaKnown RBP13.36□□□□□ -0.27
HDAC8-217ENST00000478743 BNC1Q01954 994 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 GPR17Q13304 367 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 PDGFRLQ15198 375 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 ZNF77Q15935 545 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 INF2Q27J81 1249 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 DCAF4L1Q3SXM0 396 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 CCDC157Q569K6 752 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 SPDYCQ5MJ68 293 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 TTC22Q5TAA0 569 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 PIGOQ8TEQ8 1089 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 RUFY2Q8WXA3 655 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 ERLEC1Q96DZ1 483 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 SLC22A12Q96S37 553 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 SEPT5Q99719 369 aaPredicted RBP13.36□□□□□ -0.27
HDAC8-217ENST00000478743 DUS2Q9NX74 493 aaKnown RBP13.36□□□□□ -0.27
HDAC8-217ENST00000478743 NAP1L2Q9ULW6 460 aaPredicted RBP13.36□□□□□ -0.27
HDAC8-217ENST00000478743 FNDC3AQ9Y2H6 1198 aaKnown RBP13.36□□□□□ -0.27
HDAC8-217ENST00000478743 ASB3Q9Y575 518 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 MYLKQ15746 1914 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 IGHV1OR15-9A0A0B4J2B8 117 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 ACKR2O00590 384 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 AP5Z1O43299 807 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 SLC28A2O43868 658 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 ALDH1A2O94788 518 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 OAZ2O95190 189 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 FGF19O95750 216 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 F11P03951 625 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 AVPR1AP37288 418 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 CXADRP78310 365 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 AMPD2Q01433 879 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 SEMG2Q02383 582 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 YWHAHQ04917 246 aaPredicted RBP13.35□□□□□ -0.27
HDAC8-217ENST00000478743 USP4Q13107 963 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 SMAD1Q15797 465 aaKnown RBP13.35□□□□□ -0.27
HDAC8-217ENST00000478743 TAF1BQ53T94 588 aaPredicted RBP13.35□□□□□ -0.27
HDAC8-217ENST00000478743 LMBRD2Q68DH5 695 aaPredicted RBP13.35□□□□□ -0.27
HDAC8-217ENST00000478743 CC2D1AQ6P1N0 951 aaPredicted RBP13.35□□□□□ -0.27
HDAC8-217ENST00000478743 DHRS13Q6UX07 377 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 ZBTB8OSQ8IWT0 167 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 PGBD3Q8N328 593 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 TRIML1Q8N9V2 468 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 APPL2Q8NEU8 664 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 OSCP1Q8WVF1 389 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 PNMA5Q96PV4 448 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 CDT1Q9H211 546 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 LINC00597Q9H2U6 94 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 POLD4Q9HCU8 107 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 CALCOCO1Q9P1Z2 691 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 MYO9AB2RTY4 2548 aa13.35□□□□□ -0.27
HDAC8-217ENST00000478743 M0QZQ0 153 aa13.34□□□□□ -0.27
HDAC8-217ENST00000478743 ERVH48-1M5A8F1 160 aa13.34□□□□□ -0.27
HDAC8-217ENST00000478743 HLA-EP13747 358 aa13.34□□□□□ -0.27
HDAC8-217ENST00000478743 GRM5P41594 1212 aa13.34□□□□□ -0.27
HDAC8-217ENST00000478743 NLRP12P59046 1061 aa13.34□□□□□ -0.27
HDAC8-217ENST00000478743 ZC2HC1CQ53FD0 456 aaPredicted RBP13.34□□□□□ -0.27
HDAC8-217ENST00000478743 MOXD1Q6UVY6 613 aa13.34□□□□□ -0.27
HDAC8-217ENST00000478743 LRRC69Q6ZNQ3 347 aa13.34□□□□□ -0.27
HDAC8-217ENST00000478743 C12orf40Q86WS4 652 aa13.34□□□□□ -0.27
HDAC8-217ENST00000478743 EFCAB13Q8IY85 973 aa13.34□□□□□ -0.27
HDAC8-217ENST00000478743 GALNT15Q8N3T1 639 aa13.34□□□□□ -0.27
HDAC8-217ENST00000478743 CCDC148Q8NFR7 591 aa13.34□□□□□ -0.27
HDAC8-217ENST00000478743 OR10T2Q8NGX3 314 aa13.34□□□□□ -0.27
HDAC8-217ENST00000478743 GCNAQ96QF7 691 aa13.34□□□□□ -0.27
HDAC8-217ENST00000478743 EIF2AK1Q9BQI3 630 aaKnown RBP13.34□□□□□ -0.27
HDAC8-217ENST00000478743 MYOFQ9NZM1 2061 aa13.34□□□□□ -0.27
HDAC8-217ENST00000478743 MYO18AQ92614 2054 aaKnown RBP13.33□□□□□ -0.27
HDAC8-217ENST00000478743 ANKRD17O75179 2603 aaKnown RBP13.33□□□□□ -0.28
HDAC8-217ENST00000478743 A0A1W2PQD8 194 aa13.33□□□□□ -0.28
HDAC8-217ENST00000478743 KCNE1P15382 129 aa13.33□□□□□ -0.28
HDAC8-217ENST00000478743 HMGA1P17096 107 aaKnown RBP13.33□□□□□ -0.28
HDAC8-217ENST00000478743 GABRG2P18507 467 aa13.33□□□□□ -0.28
HDAC8-217ENST00000478743 SLC6A11P48066 632 aa13.33□□□□□ -0.28
HDAC8-217ENST00000478743 IFNAR2P48551 515 aa13.33□□□□□ -0.28
HDAC8-217ENST00000478743 GPR15P49685 360 aa13.33□□□□□ -0.28
HDAC8-217ENST00000478743 NLRP5P59047 1200 aa13.33□□□□□ -0.28
HDAC8-217ENST00000478743 TLE3Q04726 772 aa13.33□□□□□ -0.28
HDAC8-217ENST00000478743 NECTIN1Q15223 517 aa13.33□□□□□ -0.28
HDAC8-217ENST00000478743 NTRK3Q16288 839 aa13.33□□□□□ -0.28
HDAC8-217ENST00000478743 ADCK5Q3MIX3 580 aa13.33□□□□□ -0.28
HDAC8-217ENST00000478743 ATF7IP2Q5U623 682 aa13.33□□□□□ -0.28
HDAC8-217ENST00000478743 KRT25Q7Z3Z0 450 aa13.33□□□□□ -0.28
HDAC8-217ENST00000478743 ITIH5Q86UX2 942 aa13.33□□□□□ -0.28
HDAC8-217ENST00000478743 ATP2A3Q93084 1043 aa13.33□□□□□ -0.28
HDAC8-217ENST00000478743 KIF9Q9HAQ2 790 aa13.33□□□□□ -0.28
HDAC8-217ENST00000478743 RELNP78509 3460 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 PPEF2O14830 753 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 CILPO75339 1184 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 LYPLA2O95372 231 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 CPA1P15085 419 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 KIR2DL1P43626 348 aaPredicted RBP13.32□□□□□ -0.28
HDAC8-217ENST00000478743 GUCY2FP51841 1108 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 SPAG1Q07617 926 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 CCDC173Q0VFZ6 552 aa13.32□□□□□ -0.28
HDAC8-217ENST00000478743 SCRN1Q12765 414 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms