RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 ZNF334Q9HCZ1 680 aaPredicted RBP17.15■□□□□ 0.34
CYTH3-206ENST00000478541 GTF3C4Q9UKN8 822 aa17.15■□□□□ 0.34
CYTH3-206ENST00000478541 CDH9Q9ULB4 789 aa17.15■□□□□ 0.34
CYTH3-206ENST00000478541 CIZ1Q9ULV3 898 aaPredicted RBP17.15■□□□□ 0.34
CYTH3-206ENST00000478541 FRMD4BQ9Y2L6 1034 aa17.15■□□□□ 0.34
CYTH3-206ENST00000478541 COL4A2P08572 1712 aa17.14■□□□□ 0.33
CYTH3-206ENST00000478541 IKBKBO14920 756 aa17.14■□□□□ 0.33
CYTH3-206ENST00000478541 C4BPAP04003 597 aaKnown RBP17.14■□□□□ 0.33
CYTH3-206ENST00000478541 PTPN5P54829 565 aa17.14■□□□□ 0.33
CYTH3-206ENST00000478541 ENPEPQ07075 957 aa17.14■□□□□ 0.33
CYTH3-206ENST00000478541 PNOCQ13519 176 aa17.14■□□□□ 0.33
CYTH3-206ENST00000478541 WDR72Q3MJ13 1102 aa17.14■□□□□ 0.33
CYTH3-206ENST00000478541 TDRD10Q5VZ19 366 aaKnown RBP17.14■□□□□ 0.33
CYTH3-206ENST00000478541 SPATA20Q8TB22 786 aa17.14■□□□□ 0.33
CYTH3-206ENST00000478541 ZSCAN18Q8TBC5 510 aaPredicted RBP17.14■□□□□ 0.33
CYTH3-206ENST00000478541 SYAP1Q96A49 352 aaPredicted RBP17.14■□□□□ 0.33
CYTH3-206ENST00000478541 E2F7Q96AV8 911 aa17.14■□□□□ 0.33
CYTH3-206ENST00000478541 SHDQ96IW2 340 aa17.14■□□□□ 0.33
CYTH3-206ENST00000478541 MMS19Q96T76 1030 aa17.14■□□□□ 0.33
CYTH3-206ENST00000478541 PI4K2AQ9BTU6 479 aa17.14■□□□□ 0.33
CYTH3-206ENST00000478541 RMND1Q9NWS8 449 aa17.14■□□□□ 0.33
CYTH3-206ENST00000478541 GREB1Q4ZG55 1949 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 MYBPHLA2RUH7 354 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 GALR2O43603 387 aaPredicted RBP17.13■□□□□ 0.33
CYTH3-206ENST00000478541 HCRTO43612 131 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 NR2F2P24468 414 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 LMO2P25791 158 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 GABRR2P28476 465 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 WEE1P30291 646 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 CDC25CP30307 473 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 CDR1P51861 262 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 STARD6P59095 220 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 MYL6P60660 151 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 RPL10AP62906 217 aaKnown RBP17.13■□□□□ 0.33
CYTH3-206ENST00000478541 TNNC1P63316 161 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 NHLH1Q02575 133 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 PRKCQQ04759 706 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 TCF15Q12870 199 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 MAPRE1Q15691 268 aaKnown RBP17.13■□□□□ 0.33
CYTH3-206ENST00000478541 ZCWPW2Q504Y3 356 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 COBLL1Q53SF7 1204 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 C4orf50Q6ZRC1 276 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 ELOA2Q8IYF1 753 aaPredicted RBP17.13■□□□□ 0.33
CYTH3-206ENST00000478541 DEPDC1BQ8WUY9 529 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 DNASE1L2Q92874 299 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 GSDMAQ96QA5 445 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 SYT15Q9BQS2 421 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 MKNK1Q9BUB5 465 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 DDX23Q9BUQ8 820 aaKnown RBP17.13■□□□□ 0.33
CYTH3-206ENST00000478541 ATXN3LQ9H3M9 355 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 SLITRK6Q9H5Y7 841 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 TBC1D17Q9HA65 648 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 IL21Q9HBE4 155 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 ZMYM5Q9UJ78 669 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 MAPK8IP1Q9UQF2 711 aa17.13■□□□□ 0.33
CYTH3-206ENST00000478541 PI15O43692 258 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 PHACTR2O75167 634 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 CSH1P0DML2 217 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 CSH2P0DML3 217 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 HMGA1P17096 107 aaKnown RBP17.12■□□□□ 0.33
CYTH3-206ENST00000478541 PSMC3P17980 439 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 CYP2F1P24903 491 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 RPL13P26373 211 aaKnown RBP17.12■□□□□ 0.33
CYTH3-206ENST00000478541 MAGEA11P43364 429 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 MCCD1P59942 119 aaPredicted RBP17.12■□□□□ 0.33
CYTH3-206ENST00000478541 DLG4P78352 724 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 BIRC3Q13489 604 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 NCOA4Q13772 614 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 TAF12Q16514 161 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 EDRF1Q3B7T1 1238 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 ZACNQ401N2 412 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 SLC44A4Q53GD3 710 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 ARHGAP15Q53QZ3 475 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 CEP135Q66GS9 1140 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 VITQ6UXI7 678 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 INTS8Q75QN2 995 aaKnown RBP17.12■□□□□ 0.33
CYTH3-206ENST00000478541 SPATA2LQ8IUW3 424 aaPredicted RBP17.12■□□□□ 0.33
CYTH3-206ENST00000478541 MFSD6LQ8IWD5 586 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 GIPC2Q8TF65 315 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 MRPL45Q9BRJ2 306 aaKnown RBP17.12■□□□□ 0.33
CYTH3-206ENST00000478541 IRF2BPLQ9H1B7 796 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 CRTAC1Q9NQ79 661 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 TRPV5Q9NQA5 729 aa17.12■□□□□ 0.33
CYTH3-206ENST00000478541 MIA3Q5JRA6 1907 aa17.11■□□□□ 0.33
CYTH3-206ENST00000478541 SOBPA7XYQ1 873 aa17.11■□□□□ 0.33
CYTH3-206ENST00000478541 ATP2C2O75185 946 aa17.11■□□□□ 0.33
CYTH3-206ENST00000478541 AKAP3O75969 853 aa17.11■□□□□ 0.33
CYTH3-206ENST00000478541 VNN1O95497 513 aa17.11■□□□□ 0.33
CYTH3-206ENST00000478541 GNL1P36915 607 aaPredicted RBP17.11■□□□□ 0.33
CYTH3-206ENST00000478541 MLF2Q15773 248 aaPredicted RBP17.11■□□□□ 0.33
CYTH3-206ENST00000478541 CCDC142Q17RM4 750 aa17.11■□□□□ 0.33
CYTH3-206ENST00000478541 C1orf220Q5T0J3 134 aa17.11■□□□□ 0.33
CYTH3-206ENST00000478541 STXBP5Q5T5C0 1151 aa17.11■□□□□ 0.33
CYTH3-206ENST00000478541 ZNF658Q5TYW1 1059 aaPredicted RBP17.11■□□□□ 0.33
CYTH3-206ENST00000478541 VSTM1Q6UX27 236 aa17.11■□□□□ 0.33
CYTH3-206ENST00000478541 MYCBPAPQ8TBZ2 947 aa17.11■□□□□ 0.33
CYTH3-206ENST00000478541 TAF4BQ92750 862 aa17.11■□□□□ 0.33
CYTH3-206ENST00000478541 TRMT2BQ96GJ1 504 aaKnown RBP17.11■□□□□ 0.33
CYTH3-206ENST00000478541 CEP295NLQ96MC4 621 aa17.11■□□□□ 0.33
CYTH3-206ENST00000478541 GCNAQ96QF7 691 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms