RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 SPDYCQ5MJ68 293 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 CBWD5Q5RIA9 395 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 EMC10Q5UCC4 262 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 PCNX4Q63HM2 1172 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 C11orf63Q6NUN7 778 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 XRRA1Q6P2D8 792 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 LILRA6Q6PI73 481 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 KDM7AQ6ZMT4 941 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 Q7L0L9 218 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 DAAM2Q86T65 1068 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 KLHL7Q8IXQ5 586 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 C4orf19Q8IY42 314 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 NIM1KQ8IY84 436 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 DAW1Q8N136 415 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 GPC2Q8N158 579 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 ARFGAP2Q8N6H7 521 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 PRPF38AQ8NAV1 312 aaKnown RBP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 XXYLT1Q8NBI6 393 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 RDM1Q8NG50 284 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 OLIG1Q8TAK6 271 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 MORC4Q8TE76 937 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 CLEC4DQ8WXI8 215 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 ARL8AQ96BM9 186 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 HOOK2Q96ED9 719 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 ZBED3Q96IU2 234 aaPredicted RBP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 TOX2Q96NM4 488 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 AGPAT1Q99943 283 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 GPR88Q9GZN0 384 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 RAB17Q9H0T7 212 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 CARD9Q9H257 536 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 BCAS3Q9H6U6 928 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 AGO4Q9HCK5 861 aaKnown RBP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 POLD4Q9HCU8 107 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 METTL5Q9NRN9 209 aaKnown RBP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 KCNH7Q9NS40 1196 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 RAD18Q9NS91 495 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 ANKEF1Q9NU02 776 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 FBXO28Q9NVF7 368 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 WRAP73Q9P2S5 460 aaPredicted RBP5.3□□□□□ -1.56
SF3B6-202ENST00000478050 EXOC7Q9UPT5 735 aa5.3□□□□□ -1.56
SF3B6-202ENST00000478050 ZNF536O15090 1300 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 EMSYQ7Z589 1322 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 ATXN2Q99700 1313 aaKnown RBP5.29□□□□□ -1.56
SF3B6-202ENST00000478050 LCTP09848 1927 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.29□□□□□ -1.56
SF3B6-202ENST00000478050 ESYT3A0FGR9 886 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 ZSCAN5CA6NGD5 496 aaPredicted RBP5.29□□□□□ -1.56
SF3B6-202ENST00000478050 KRTAP9-7A8MTY7 169 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 MYO1CO00159 1063 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 ZEB2O60315 1214 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 BUB1BO60566 1050 aaPredicted RBP5.29□□□□□ -1.56
SF3B6-202ENST00000478050 FKTNO75072 461 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 RTN2O75298 545 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 MTA2O94776 668 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 ERLIN2O94905 339 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 FAM153BP0C7A2 387 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 ESRRAP11474 423 aaPredicted RBP5.29□□□□□ -1.56
SF3B6-202ENST00000478050 SFNP31947 248 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 GBP1P32455 592 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 ABCD1P33897 745 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 RAP1GAPP47736 663 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 RARRES1P49788 294 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 MXI1P50539 228 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 GUCY2FP51841 1108 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 NCKAP1LP55160 1127 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 RNASE9P60153 205 aaKnown RBP5.29□□□□□ -1.56
SF3B6-202ENST00000478050 PTENP60484 403 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 PSMC5P62195 406 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 GTF2BQ00403 316 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 TNFAIP1Q13829 316 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 DHX34Q14147 1143 aaKnown RBP5.29□□□□□ -1.56
SF3B6-202ENST00000478050 PLS1Q14651 629 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 FAM153CQ494X1 144 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 DNAJC21Q5F1R6 531 aaKnown RBP5.29□□□□□ -1.56
SF3B6-202ENST00000478050 HP1BP3Q5SSJ5 553 aaPredicted RBP5.29□□□□□ -1.56
SF3B6-202ENST00000478050 LCE5AQ5TCM9 118 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 AGBL2Q5U5Z8 902 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 OGFOD3Q6PK18 319 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 SLC30A10Q6XR72 485 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 RUFY4Q6ZNE9 571 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 HAUS6Q7Z4H7 955 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 USP37Q86T82 979 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 SPATS2Q86XZ4 545 aaKnown RBP5.29□□□□□ -1.56
SF3B6-202ENST00000478050 EFCAB13Q8IY85 973 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 UBL4BQ8N7F7 174 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 LMO3Q8TAP4 145 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 ZSCAN18Q8TBC5 510 aaPredicted RBP5.29□□□□□ -1.56
SF3B6-202ENST00000478050 SLC35G2Q8TBE7 412 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 SYTL5Q8TDW5 730 aaPredicted RBP5.29□□□□□ -1.56
SF3B6-202ENST00000478050 FBF1Q8TES7 1133 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 SEC14L1Q92503 715 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 ZBTB9Q96C00 473 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 ATP6V1G3Q96LB4 118 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 FAM81BQ96LP2 452 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 RUNDC3BQ96NL0 473 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 TINF2Q9BSI4 451 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 HTATIP2Q9BUP3 242 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 ZNF341Q9BYN7 854 aa5.29□□□□□ -1.56
SF3B6-202ENST00000478050 TGIF2Q9GZN2 237 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms