RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 KCTD10Q9H3F6 313 aa14.8□□□□□ -0.04
HDAC7-222ENST00000477937 ATXN3LQ9H3M9 355 aa14.8□□□□□ -0.04
HDAC7-222ENST00000477937 BRD9Q9H8M2 597 aa14.8□□□□□ -0.04
HDAC7-222ENST00000477937 ABCB6Q9NP58 842 aa14.8□□□□□ -0.04
HDAC7-222ENST00000477937 DMAC2Q9NW81 257 aa14.8□□□□□ -0.04
HDAC7-222ENST00000477937 KANSL1LA0AUZ9 987 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 GOLGA6L4A6NEF3 574 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 CALUO43852 315 aaPredicted RBP14.79□□□□□ -0.04
HDAC7-222ENST00000477937 PHACTR2O75167 634 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 RHOBTB3O94955 611 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 PRR29P0C7W0 189 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 PTPRDP23468 1912 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 VIPR2P41587 438 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 MRE11P49959 708 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 RPL10AP62906 217 aaKnown RBP14.79□□□□□ -0.04
HDAC7-222ENST00000477937 DPYDQ12882 1025 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 GREB1Q4ZG55 1949 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 VITQ6UXI7 678 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 OSTM1Q86WC4 334 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 PJA1Q8NG27 643 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 TMEM174Q8WUU8 243 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 DEPDC1BQ8WUY9 529 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 DNASE1L2Q92874 299 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 IRF7Q92985 503 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 PKMYT1Q99640 499 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 GOLPH3LQ9H4A5 285 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 CDH9Q9ULB4 789 aa14.79□□□□□ -0.04
HDAC7-222ENST00000477937 HEPACAM2A8MVW5 462 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 DPYSL4O14531 572 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 NR3C1P04150 777 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 DCNP07585 359 aaKnown RBP14.78□□□□□ -0.04
HDAC7-222ENST00000477937 PDGFRBP09619 1106 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 FAM163BP0C2L3 166 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 CSH1P0DML2 217 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 CSH2P0DML3 217 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 CYP2F1P24903 491 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 LMO2P25791 158 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 GDI1P31150 447 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 ATICP31939 592 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 AP3M2P53677 418 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 TNNC1P63316 161 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 MAPRE1Q15691 268 aaKnown RBP14.78□□□□□ -0.04
HDAC7-222ENST00000477937 WDR72Q3MJ13 1102 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 STXBP5Q5T5C0 1151 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 GPR158Q5T848 1215 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 C4orf50Q6ZRC1 276 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 TPRG1Q6ZUI0 275 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 SPATA2LQ8IUW3 424 aaPredicted RBP14.78□□□□□ -0.04
HDAC7-222ENST00000477937 ARID3BQ8IVW6 561 aaPredicted RBP14.78□□□□□ -0.04
HDAC7-222ENST00000477937 YAF2Q8IY57 180 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 PARD3BQ8TEW8 1205 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 KBTBD7Q8WVZ9 684 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 SYAP1Q96A49 352 aaPredicted RBP14.78□□□□□ -0.04
HDAC7-222ENST00000477937 FUBP3Q96I24 572 aaKnown RBP eCLIP14.78□□□□□ -0.04
HDAC7-222ENST00000477937 PHOX2BQ99453 314 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 SYT15Q9BQS2 421 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 DDX23Q9BUQ8 820 aaKnown RBP14.78□□□□□ -0.04
HDAC7-222ENST00000477937 FOXQ1Q9C009 403 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 GZF1Q9H116 711 aaPredicted RBP14.78□□□□□ -0.04
HDAC7-222ENST00000477937 SNX25Q9H3E2 840 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 TASP1Q9H6P5 420 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 HEBP1Q9NRV9 189 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 FAM86C1Q9NVL1 165 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 FRMD4BQ9Y2L6 1034 aa14.78□□□□□ -0.04
HDAC7-222ENST00000477937 ANAPC1Q9H1A4 1944 aa14.77□□□□□ -0.04
HDAC7-222ENST00000477937 MYBPHLA2RUH7 354 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 ZNF263O14978 683 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 HCRTO43612 131 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 STAU1O95793 577 aaKnown RBP14.77□□□□□ -0.05
HDAC7-222ENST00000477937 WARSP23381 471 aaKnown RBP14.77□□□□□ -0.05
HDAC7-222ENST00000477937 GNL1P36915 607 aaPredicted RBP14.77□□□□□ -0.05
HDAC7-222ENST00000477937 CASP4P49662 377 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 MYL6P60660 151 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 CLDN10P78369 228 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 BIRC3Q13489 604 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 KCNB1Q14721 858 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 UBXN2BQ14CS0 331 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 ANGPT1Q15389 498 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 DDR2Q16832 855 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 CFAP221Q4G0U5 840 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 FAM171BQ6P995 826 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 ZNF852Q6ZMS4 543 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 NELL2Q99435 816 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 MKNK1Q9BUB5 465 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 OSBPL6Q9BZF3 934 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 IL21Q9HBE4 155 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 TRPV5Q9NQA5 729 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 MAGEC2Q9UBF1 373 aaPredicted RBP14.77□□□□□ -0.05
HDAC7-222ENST00000477937 NXF1Q9UBU9 619 aaKnown RBP14.77□□□□□ -0.05
HDAC7-222ENST00000477937 ZMYM5Q9UJ78 669 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 MAGED2Q9UNF1 606 aaPredicted RBP14.77□□□□□ -0.05
HDAC7-222ENST00000477937 TRAF3IP3Q9Y228 551 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 MRPS17Q9Y2R5 130 aaKnown RBP14.77□□□□□ -0.05
HDAC7-222ENST00000477937 COL4A3Q01955 1670 aa14.77□□□□□ -0.05
HDAC7-222ENST00000477937 MYH10P35580 1976 aa14.76□□□□□ -0.05
HDAC7-222ENST00000477937 KIF26AQ9ULI4 1882 aaPredicted RBP14.76□□□□□ -0.05
HDAC7-222ENST00000477937 FAM170BA6NMN3 283 aa14.76□□□□□ -0.05
HDAC7-222ENST00000477937 LRRIQ3A6PVS8 624 aaPredicted RBP14.76□□□□□ -0.05
HDAC7-222ENST00000477937 NCAM2O15394 837 aa14.76□□□□□ -0.05
HDAC7-222ENST00000477937 ATP2C2O75185 946 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms