RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PDCD7Q8N8D1 485 aaKnown RBP7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 PIGOQ8TEQ8 1089 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 OSCP1Q8WVF1 389 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 NUP205Q92621 2012 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 LPIN3Q9BQK8 851 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 SLC26A6Q9BXS9 759 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 KIF9Q9HAQ2 790 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 PTPRHQ9HD43 1115 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 CNTN3Q9P232 1028 aa7.99□□□□□ -1.13
SPTLC1-205ENST00000477888 NID2Q14112 1375 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 PDCD11Q14690 1871 aaKnown RBP7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 USP9XQ93008 2570 aaPredicted RBP7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 A0A1W2PQD8 194 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 SGK1O00141 431 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 TRIM66O15016 1216 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 F11P03951 625 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 ATXN1LP0C7T5 689 aaKnown RBP7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 IFNAR1P17181 557 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 LIG1P18858 919 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 DDX6P26196 483 aaKnown RBP eCLIP7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 NMT1P30419 496 aaKnown RBP7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 OPRD1P41143 372 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 AARSP49588 968 aaKnown RBP eCLIP7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 OSTNP61366 133 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 MRPS21P82921 87 aaKnown RBP7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 RPL6Q02878 288 aaKnown RBP7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 MTF1Q14872 753 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 GAB4Q2WGN9 574 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 TXNDC8Q6A555 127 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 DBX2Q6ZNG2 339 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 MON1AQ86VX9 555 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 GALNT15Q8N3T1 639 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 IL17RCQ8NAC3 791 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 TXNDC5Q8NBS9 432 aaKnown RBP7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 MCPH1Q8NEM0 835 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 BAHD1Q8TBE0 780 aaPredicted RBP7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 FCRL3Q96P31 734 aaPredicted RBP7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 KIF2CQ99661 725 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 CCDC94Q9BW85 323 aaPredicted RBP7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 LINC00597Q9H2U6 94 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 DUS2Q9NX74 493 aaKnown RBP7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 NAP1L2Q9ULW6 460 aaPredicted RBP7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 TNFSF13BQ9Y275 285 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 COL12A1Q99715 3063 aa7.98□□□□□ -1.13
SPTLC1-205ENST00000477888 A0A0A0MRY4 1105 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 TEX51A0A1B0GUA7 166 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 FAM149AA5PLN7 773 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 E9PAM4 449 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 ADAM23O75077 832 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 GCFC2P16383 781 aaKnown RBP7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 HMGA1P17096 107 aaKnown RBP7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 ATP2B1P20020 1258 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 NAMPTP43490 491 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 TUFMP49411 452 aaKnown RBP7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 EFNA5P52803 228 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 NLRP12P59046 1061 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 FAM160A1Q05DH4 1040 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 SCRN1Q12765 414 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 AAMPQ13685 434 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 VEPH1Q14D04 833 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 SMAD1Q15797 465 aaKnown RBP7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 ZNF77Q15935 545 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 HSF5Q4G112 596 aaPredicted RBP7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 GALNT17Q6IS24 598 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 GPR155Q7Z3F1 870 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 KRT25Q7Z3Z0 450 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 APBB1IPQ7Z5R6 666 aaPredicted RBP7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 NEK8Q86SG6 692 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 SLC41A1Q8IVJ1 513 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 SFTPA1Q8IWL2 248 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 EFCAB13Q8IY85 973 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 SLFN12Q8IYM2 578 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 TMEM130Q8N3G9 435 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 ALLCQ8N6M5 410 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 DEPTORQ8TB45 409 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 HMGB4Q8WW32 186 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 ATP2A3Q93084 1043 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 ACAP3Q96P50 834 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 GCNAQ96QF7 691 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 NACC1Q96RE7 527 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 PI4K2AQ9BTU6 479 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 KIFC3Q9BVG8 833 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 CDT1Q9H211 546 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 BCCIPQ9P287 314 aaKnown RBP eCLIP7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 WNT6Q9Y6F9 365 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 ATG2BQ96BY7 2078 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 PIEZO2Q9H5I5 2752 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 MGAQ8IWI9 3026 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 ATMQ13315 3056 aa7.97□□□□□ -1.13
SPTLC1-205ENST00000477888 PYCARD-AS1I3L0S3 204 aa7.96□□□□□ -1.14
SPTLC1-205ENST00000477888 ABLIM1O14639 778 aa7.96□□□□□ -1.14
SPTLC1-205ENST00000477888 TLX3O43711 291 aaPredicted RBP7.96□□□□□ -1.14
SPTLC1-205ENST00000477888 CCNT1O60563 726 aaKnown RBP7.96□□□□□ -1.14
SPTLC1-205ENST00000477888 WISP1O95388 367 aa7.96□□□□□ -1.14
SPTLC1-205ENST00000477888 KLF8O95600 359 aaPredicted RBP7.96□□□□□ -1.14
SPTLC1-205ENST00000477888 ZNF883P0CG24 379 aa7.96□□□□□ -1.14
SPTLC1-205ENST00000477888 SPATA31C1P0DKV0 1188 aa7.96□□□□□ -1.14
SPTLC1-205ENST00000477888 CYP11B2P19099 503 aa7.96□□□□□ -1.14
SPTLC1-205ENST00000477888 TYMPP19971 482 aa7.96□□□□□ -1.14
SPTLC1-205ENST00000477888 HSPA4P34932 840 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms