RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 CCHCR1Q8TD31 782 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 GRK7Q8WTQ7 553 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 ALG3Q92685 438 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 TNIP3Q96KP6 325 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 CAPNS2Q96L46 248 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 PPP1R16BQ96T49 567 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 UBXN6Q9BZV1 441 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 TSPYL1Q9H0U9 437 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 GOLPH3Q9H4A6 298 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 LRRC19Q9H756 370 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 SYNCQ9H7C4 482 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 EPB41L5Q9HCM4 733 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 SNTG2Q9NY99 539 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 HESX1Q9UBX0 185 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 SRRDQ9UH36 339 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 DMGDHQ9UI17 866 aaKnown RBP8.4□□□□□ -1.06
VMA21-203ENST00000477649 GINS2Q9Y248 185 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 GIT1Q9Y2X7 761 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 MYH10P35580 1976 aa8.4□□□□□ -1.06
VMA21-203ENST00000477649 CASP8AP2Q9UKL3 1982 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 SMIM28A0A1B0GU29 152 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 O00370 1275 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 MEFVO15553 781 aaPredicted RBP8.39□□□□□ -1.07
VMA21-203ENST00000477649 RAD51CO43502 376 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 OPA1O60313 960 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 ZNF623O75123 536 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 CSDE1O75534 798 aaKnown RBP8.39□□□□□ -1.07
VMA21-203ENST00000477649 ERBB2P04626 1255 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 KRT3P12035 628 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 CTGFP29279 349 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 RPL9P32969 192 aaKnown RBP8.39□□□□□ -1.07
VMA21-203ENST00000477649 TNNT3P45378 269 aaPredicted RBP8.39□□□□□ -1.07
VMA21-203ENST00000477649 TAF6P49848 677 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 NDST1P52848 882 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 SLC8A3P57103 927 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 DR1Q01658 176 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 GUCY2DQ02846 1103 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 PRKCZQ05513 592 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 CACNB2Q08289 660 aaPredicted RBP8.39□□□□□ -1.07
VMA21-203ENST00000477649 PTK7Q13308 1070 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 ODF2Q5BJF6 829 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 FAM26DQ5JW98 314 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 PPP1R15BQ5SWA1 713 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 UBXN11Q5T124 520 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 MAP3K21Q5TCX8 1036 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 C9orf57Q5W0N0 161 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 TWF2Q6IBS0 349 aaKnown RBP8.39□□□□□ -1.07
VMA21-203ENST00000477649 SCARA5Q6ZMJ2 495 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 CEP128Q6ZU80 1094 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 LIMS2Q7Z4I7 341 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 CROCCP2Q86T23 111 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 PASD1Q8IV76 773 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 KLHL7Q8IXQ5 586 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 CRYBG2Q8N1P7 616 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 BBOF1Q8ND07 529 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 FAM71BQ8TC56 605 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 TFAP2BQ92481 460 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 KRT35Q92764 455 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 MAGOHBQ96A72 148 aaKnown RBP8.39□□□□□ -1.07
VMA21-203ENST00000477649 PGBD4Q96DM1 585 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 MCRS1Q96EZ8 462 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 DDX27Q96GQ7 796 aaKnown RBP8.39□□□□□ -1.07
VMA21-203ENST00000477649 HEXIM2Q96MH2 286 aaKnown RBP8.39□□□□□ -1.07
VMA21-203ENST00000477649 EIF2AQ9BY44 585 aaKnown RBP8.39□□□□□ -1.07
VMA21-203ENST00000477649 SENP6Q9GZR1 1112 aaPredicted RBP8.39□□□□□ -1.07
VMA21-203ENST00000477649 ELOVL4Q9GZR5 314 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 SMYD3Q9H7B4 428 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 POLIQ9UNA4 740 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 IPPQ9Y573 584 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 CDY2AQ9Y6F7 541 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 KAT6AQ92794 2004 aa8.39□□□□□ -1.07
VMA21-203ENST00000477649 RALGAPA2Q2PPJ7 1873 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 EVPLQ92817 2033 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 A6NNZ2 444 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 KPNA7A9QM74 516 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 M0QYV0 167 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 HUS1O60921 280 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 HSF2BPO75031 334 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 MICAL2O94851 1124 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 SEC31AO94979 1220 aaKnown RBP8.38□□□□□ -1.07
VMA21-203ENST00000477649 TJP3O95049 919 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 GAS8O95995 478 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 GLI1P08151 1106 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 PYGMP11217 842 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 ITGA4P13612 1032 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 WARSP23381 471 aaKnown RBP8.38□□□□□ -1.07
VMA21-203ENST00000477649 PCK1P35558 622 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 GPD2P43304 727 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 ACADSBP45954 432 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 PLA2G4AP47712 749 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 RNASE9P60153 205 aaKnown RBP8.38□□□□□ -1.07
VMA21-203ENST00000477649 PSMC1P62191 440 aaKnown RBP8.38□□□□□ -1.07
VMA21-203ENST00000477649 CAV1Q03135 178 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 MGAT3Q09327 533 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 TMEM62Q0P6H9 643 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 TUBB8Q3ZCM7 444 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 ZNF394Q53GI3 561 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 CFAP58Q5T655 872 aa8.38□□□□□ -1.07
VMA21-203ENST00000477649 COL13A1Q5TAT6 717 aaPredicted RBP8.38□□□□□ -1.07
VMA21-203ENST00000477649 CCSAPQ6IQ19 270 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms