RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 CCDC160A6NGH7 325 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 HAT1O14929 419 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 B4GALT4O60513 344 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 PLA2G6O60733 806 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 TFAP2AP05549 437 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 ENO2P09104 434 aaPredicted RBP13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 SMIM18P0DKX4 95 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 PLCG1P19174 1290 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 ATP5DP30049 168 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 SLC5A2P31639 672 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 KRT6CP48668 564 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 NUP107P57740 925 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 Q3C1V9 767 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 TMEM63BQ5T3F8 832 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 KRT79Q5XKE5 535 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 CGB2Q6NT52 195 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 TUBA3EQ6PEY2 450 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 MOXD1Q6UVY6 613 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 OSTM1Q86WC4 334 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 KLHL7Q8IXQ5 586 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 LSMEM1Q8N8F7 131 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 ZFP28Q8NHY6 868 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 LRRC27Q9C0I9 530 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 EHD1Q9H4M9 534 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 PALMDQ9NP74 551 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 PRR12Q9ULL5 1215 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 DOLKQ9UPQ8 538 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 TRAF3IP3Q9Y228 551 aa13.27□□□□□ -0.28
RTFDC1-207ENST00000477573 USP17L15C9J2P7 530 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 USP17L13C9JLJ4 530 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 USP17L11C9JVI0 530 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 USP17L18D6R9N7 530 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 USP17L22D6RA61 530 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 USP17L17D6RBQ6 530 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 USP17L19D6RCP7 530 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 USP17L20D6RJB6 530 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 H7C1D1 291 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 CDK2AP1O14519 115 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 HGSO14964 777 aaPredicted RBP13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 SLC37A4O43826 429 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 SH3BP5O60239 455 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 KRT75O95678 551 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 ESRRBO95718 433 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 ECE1P42892 770 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 IFI35P80217 286 aaPredicted RBP13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 USP17L24Q0WX57 530 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 KCNMA1Q12791 1236 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 KCTD21Q4G0X4 260 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 RFWD3Q6PCD5 774 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 USP17L6PQ6QN14 398 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 FAM160B2Q86V87 743 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 MMAAQ8IVH4 418 aaKnown RBP13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 LILRB4Q8NHJ6 448 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 ACER1Q8TDN7 264 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 CHPT1Q8WUD6 406 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 BORCS5Q969J3 196 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 TGS1Q96RS0 853 aaKnown RBP13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 OLFM1Q99784 485 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 SGIP1Q9BQI5 828 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 ANO3Q9BYT9 981 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 NDE1Q9NXR1 346 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 MTRF1LQ9UGC7 380 aaKnown RBP13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 PCSK1NQ9UHG2 260 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 CTNND2Q9UQB3 1225 aa13.27□□□□□ -0.29
RTFDC1-207ENST00000477573 MCF2LO15068 1137 aa13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 ADCY6O43306 1168 aa13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 GAS8O95995 478 aa13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 S100BP04271 92 aaPredicted RBP13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 HNRNPFP52597 415 aaKnown RBP13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 NADK2Q4G0N4 442 aa13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 RFPL4BQ6ZWI9 263 aa13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 PDSS2Q86YH6 399 aa13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 ATP6V0D2Q8N8Y2 350 aa13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 OR6Y1Q8NGX8 325 aa13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 ACTRT1Q8TDG2 376 aa13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 BTBD10Q9BSF8 475 aa13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 CADM1Q9BY67 442 aaKnown RBP13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 ROPN1BQ9BZX4 212 aaPredicted RBP13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 ROPN1Q9HAT0 212 aaPredicted RBP13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 TRNAU1APQ9NX07 287 aaKnown RBP13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 PGAP2Q9UHJ9 254 aa13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 DNAJC16Q9Y2G8 782 aa13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 RABGAP1Q9Y3P9 1069 aa13.26□□□□□ -0.29
RTFDC1-207ENST00000477573 CYP3A7-CYP3A51PA0A087WV96 503 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 SGTAO43765 313 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 CHEK2O96017 543 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 CYP1A2P05177 515 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 ESRRAP11474 423 aaPredicted RBP13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 ANPEPP15144 967 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 M6PRP20645 277 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 CYP3A7P24462 503 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 PCSK6P29122 969 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 PAK1Q13153 545 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 C16orf72Q14CZ0 275 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 FAM83BQ5T0W9 1011 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 MEI1Q5TIA1 1274 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 CCDC62Q6P9F0 684 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 MIER3Q7Z3K6 550 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 SLC51BQ86UW2 128 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 SLFN12Q8IYM2 578 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms