RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 RXFP1Q9HBX9 757 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 FNIP2Q9P278 1114 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 BARX2Q9UMQ3 279 aaPredicted RBP16.34■□□□□ 0.21
SEC13-215ENST00000477547 DAAM1Q9Y4D1 1078 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 PCDHB4Q9Y5E5 795 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 BRWD1Q9NSI6 2320 aa16.34■□□□□ 0.21
SEC13-215ENST00000477547 GOLGA6L3A6NEY3 463 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 ADAM12O43184 909 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 TBC1D4O60343 1298 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 NOL4O94818 638 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 PDGFRBP09619 1106 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 KRT5P13647 590 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 ACO1P21399 889 aaKnown RBP16.33■□□□□ 0.2
SEC13-215ENST00000477547 LMO2P25791 158 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 OR1D2P34982 312 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 CCDC142Q17RM4 750 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 ZNF394Q53GI3 561 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 SLC8B1Q6J4K2 584 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 TMEM270Q6UE05 265 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 UNC93AQ86WB7 457 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 RBBP8NLQ8NC74 664 aaPredicted RBP16.33■□□□□ 0.2
SEC13-215ENST00000477547 B3GALNT2Q8NCR0 500 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 JAKMIP2Q96AA8 810 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 TNIP3Q96KP6 325 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 KLHL5Q96PQ7 755 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 TWNKQ96RR1 684 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 ACBD6Q9BR61 282 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 NT5C1AQ9BXI3 368 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 ELOVL4Q9GZR5 314 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 DNAI2Q9GZS0 605 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 ZCWPW1Q9H0M4 648 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 NLRC4Q9NPP4 1024 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 CEP72Q9P209 647 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 CDH9Q9ULB4 789 aa16.33■□□□□ 0.2
SEC13-215ENST00000477547 ITIH6Q6UXX5 1313 aa16.32■□□□□ 0.2
SEC13-215ENST00000477547 WDR27A2RRH5 827 aa16.32■□□□□ 0.2
SEC13-215ENST00000477547 F8VZ95 297 aa16.32■□□□□ 0.2
SEC13-215ENST00000477547 PNMA6AP0CW24 399 aaPredicted RBP16.32■□□□□ 0.2
SEC13-215ENST00000477547 ZNF75DP51815 510 aa16.32■□□□□ 0.2
SEC13-215ENST00000477547 SLC39A12Q504Y0 691 aa16.32■□□□□ 0.2
SEC13-215ENST00000477547 CACNA2D4Q7Z3S7 1137 aa16.32■□□□□ 0.2
SEC13-215ENST00000477547 ACOT1Q86TX2 421 aa16.32■□□□□ 0.2
SEC13-215ENST00000477547 WHAMMQ8TF30 809 aa16.32■□□□□ 0.2
SEC13-215ENST00000477547 SHC3Q92529 594 aa16.32■□□□□ 0.2
SEC13-215ENST00000477547 SPAG5Q96R06 1193 aa16.32■□□□□ 0.2
SEC13-215ENST00000477547 NAA15Q9BXJ9 866 aaKnown RBP16.32■□□□□ 0.2
SEC13-215ENST00000477547 LMCD1Q9NZU5 365 aa16.32■□□□□ 0.2
SEC13-215ENST00000477547 C2orf16Q68DN1 1984 aa16.32■□□□□ 0.2
SEC13-215ENST00000477547 GREB1Q4ZG55 1949 aa16.32■□□□□ 0.2
SEC13-215ENST00000477547 FSD2A1L4K1 749 aa16.31■□□□□ 0.2
SEC13-215ENST00000477547 PRR33A8MZF0 331 aa16.31■□□□□ 0.2
SEC13-215ENST00000477547 ATP2C2O75185 946 aa16.31■□□□□ 0.2
SEC13-215ENST00000477547 GLUD1P00367 558 aa16.31■□□□□ 0.2
SEC13-215ENST00000477547 KLRC2P26717 231 aa16.31■□□□□ 0.2
SEC13-215ENST00000477547 USP8P40818 1118 aa16.31■□□□□ 0.2
SEC13-215ENST00000477547 NRIP1P48552 1158 aa16.31■□□□□ 0.2
SEC13-215ENST00000477547 DRAP1Q14919 205 aaPredicted RBP16.31■□□□□ 0.2
SEC13-215ENST00000477547 TCEAL5Q5H9L2 206 aa16.31■□□□□ 0.2
SEC13-215ENST00000477547 MDH1BQ5I0G3 518 aa16.31■□□□□ 0.2
SEC13-215ENST00000477547 RBM23Q86U06 439 aaKnown RBP16.31■□□□□ 0.2
SEC13-215ENST00000477547 VSTM4Q8IW00 320 aa16.31■□□□□ 0.2
SEC13-215ENST00000477547 DCP1BQ8IZD4 617 aaKnown RBP16.31■□□□□ 0.2
SEC13-215ENST00000477547 MYLPFQ96A32 169 aa16.31■□□□□ 0.2
SEC13-215ENST00000477547 PGLYRP2Q96PD5 576 aa16.31■□□□□ 0.2
SEC13-215ENST00000477547 PKMYT1Q99640 499 aa16.31■□□□□ 0.2
SEC13-215ENST00000477547 TLE6Q9H808 572 aa16.31■□□□□ 0.2
SEC13-215ENST00000477547 GRPEL1Q9HAV7 217 aa16.31■□□□□ 0.2
SEC13-215ENST00000477547 CRTAC1Q9NQ79 661 aa16.31■□□□□ 0.2
SEC13-215ENST00000477547 FAM49BQ9NUQ9 324 aa16.31■□□□□ 0.2
SEC13-215ENST00000477547 ZNF638Q14966 1978 aaKnown RBP16.31■□□□□ 0.2
SEC13-215ENST00000477547 MTMR11A4FU01 709 aa16.3■□□□□ 0.2
SEC13-215ENST00000477547 PER2O15055 1255 aa16.3■□□□□ 0.2
SEC13-215ENST00000477547 CLASP2O75122 1294 aaKnown RBP16.3■□□□□ 0.2
SEC13-215ENST00000477547 ZNF132P52740 706 aa16.3■□□□□ 0.2
SEC13-215ENST00000477547 RAD23BP54727 409 aa16.3■□□□□ 0.2
SEC13-215ENST00000477547 RAB33AQ14088 237 aa16.3■□□□□ 0.2
SEC13-215ENST00000477547 MAPRE1Q15691 268 aaKnown RBP16.3■□□□□ 0.2
SEC13-215ENST00000477547 DUSP6Q16828 381 aa16.3■□□□□ 0.2
SEC13-215ENST00000477547 SPECC1LQ69YQ0 1117 aa16.3■□□□□ 0.2
SEC13-215ENST00000477547 PALB2Q86YC2 1186 aa16.3■□□□□ 0.2
SEC13-215ENST00000477547 GJD3Q8N144 294 aa16.3■□□□□ 0.2
SEC13-215ENST00000477547 SLC4A11Q8NBS3 891 aa16.3■□□□□ 0.2
SEC13-215ENST00000477547 TMEM176AQ96HP8 235 aa16.3■□□□□ 0.2
SEC13-215ENST00000477547 MRFAP1L1Q96HT8 127 aa16.3■□□□□ 0.2
SEC13-215ENST00000477547 STK33Q9BYT3 514 aa16.3■□□□□ 0.2
SEC13-215ENST00000477547 TTYH3Q9C0H2 523 aa16.3■□□□□ 0.2
SEC13-215ENST00000477547 GPR88Q9GZN0 384 aa16.3■□□□□ 0.2
SEC13-215ENST00000477547 TMLHEQ9NVH6 421 aa16.3■□□□□ 0.2
SEC13-215ENST00000477547 ABI2Q9NYB9 513 aaPredicted RBP16.3■□□□□ 0.2
SEC13-215ENST00000477547 GTF3C4Q9UKN8 822 aa16.3■□□□□ 0.2
SEC13-215ENST00000477547 OBSL1O75147 1896 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 WDFY4Q6ZS81 3184 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 MYBPHLA2RUH7 354 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 CD19P15391 556 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 PTPN1P18031 435 aaKnown RBP16.29■□□□□ 0.2
SEC13-215ENST00000477547 CDR1P51861 262 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 JAM2P57087 298 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 GPR17Q13304 367 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 TRIM14Q14142 442 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 NFE2Q16621 373 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms