RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 OBP2AQ9NY56 170 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 USP25Q9UHP3 1055 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 SERTAD1Q9UHV2 236 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 NDRG2Q9UN36 371 aaKnown RBP16.87■□□□□ 0.29
CLDN11-204ENST00000477531 PIAS3Q9Y6X2 628 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 MYO15AQ9UKN7 3530 aa16.87■□□□□ 0.29
CLDN11-204ENST00000477531 TSC2P49815 1807 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 MIA3Q5JRA6 1907 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 TGFB1I1O43294 461 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 SP9P0CG40 484 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 ACAT1P24752 427 aaKnown RBP16.86■□□□□ 0.29
CLDN11-204ENST00000477531 CASP1P29466 404 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 RPS9P46781 194 aaKnown RBP16.86■□□□□ 0.29
CLDN11-204ENST00000477531 KPNA1P52294 538 aaPredicted RBP16.86■□□□□ 0.29
CLDN11-204ENST00000477531 KNOP1Q1ED39 458 aaKnown RBP16.86■□□□□ 0.29
CLDN11-204ENST00000477531 ARHGAP29Q52LW3 1261 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 C1orf228Q6PIY5 440 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 GPIHBP1Q8IV16 184 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 CXorf38Q8TB03 319 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 CLDN23Q96B33 292 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 CCDC127Q96BQ5 260 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 FAM84AQ96KN4 292 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 SPATA32Q96LK8 384 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 MMS19Q96T76 1030 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 EXOC1Q9NV70 894 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 TMLHEQ9NVH6 421 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 THG1LQ9NWX6 298 aaKnown RBP16.86■□□□□ 0.29
CLDN11-204ENST00000477531 UXTQ9UBK9 157 aaPredicted RBP16.86■□□□□ 0.29
CLDN11-204ENST00000477531 GTF3C4Q9UKN8 822 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 FBXO4Q9UKT5 387 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 MAGED2Q9UNF1 606 aaPredicted RBP16.86■□□□□ 0.29
CLDN11-204ENST00000477531 ATP6V1DQ9Y5K8 247 aa16.86■□□□□ 0.29
CLDN11-204ENST00000477531 RIF1Q5UIP0 2472 aaKnown RBP16.86■□□□□ 0.29
CLDN11-204ENST00000477531 VPS13AQ96RL7 3174 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 EXOC3O60645 756 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 LMNAP02545 664 aaKnown RBP16.85■□□□□ 0.29
CLDN11-204ENST00000477531 CMA1P23946 247 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 DDX6P26196 483 aaKnown RBP eCLIP16.85■□□□□ 0.29
CLDN11-204ENST00000477531 WEE1P30291 646 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 MLLT6P55198 1093 aaPredicted RBP16.85■□□□□ 0.29
CLDN11-204ENST00000477531 CYP4F8P98187 520 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 PLCB2Q00722 1185 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 CYP24A1Q07973 514 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 EHHADHQ08426 723 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 FCHO2Q0JRZ9 810 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 TRPC3Q13507 836 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 PSMD6Q15008 389 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 MAPRE1Q15691 268 aaKnown RBP16.85■□□□□ 0.29
CLDN11-204ENST00000477531 BMT2Q1RMZ1 405 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 SOWAHAQ2M3V2 549 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 C4orf50Q6ZRC1 276 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 TRAPPC11Q7Z392 1133 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 MRPS31Q92665 395 aaKnown RBP16.85■□□□□ 0.29
CLDN11-204ENST00000477531 CCDC47Q96A33 483 aaKnown RBP16.85■□□□□ 0.29
CLDN11-204ENST00000477531 PAGE5Q96GU1 130 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 FUBP3Q96I24 572 aaKnown RBP eCLIP16.85■□□□□ 0.29
CLDN11-204ENST00000477531 C8orf33Q9H7E9 229 aaPredicted RBP16.85■□□□□ 0.29
CLDN11-204ENST00000477531 IL21Q9HBE4 155 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 R4GN57 208 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 F5P12259 2224 aa16.85■□□□□ 0.29
CLDN11-204ENST00000477531 CACNA1IQ9P0X4 2223 aa16.84■□□□□ 0.29
CLDN11-204ENST00000477531 GABRDO14764 452 aa16.84■□□□□ 0.29
CLDN11-204ENST00000477531 CYP2F1P24903 491 aa16.84■□□□□ 0.29
CLDN11-204ENST00000477531 AVPR1AP37288 418 aa16.84■□□□□ 0.29
CLDN11-204ENST00000477531 NLRP12P59046 1061 aa16.84■□□□□ 0.29
CLDN11-204ENST00000477531 CSTF1Q05048 431 aaKnown RBP16.84■□□□□ 0.29
CLDN11-204ENST00000477531 PSMD2Q13200 908 aa16.84■□□□□ 0.29
CLDN11-204ENST00000477531 ZNF528Q3MIS6 628 aa16.84■□□□□ 0.29
CLDN11-204ENST00000477531 OSTM1Q86WC4 334 aa16.84■□□□□ 0.29
CLDN11-204ENST00000477531 C12orf56Q8IXR9 622 aa16.84■□□□□ 0.29
CLDN11-204ENST00000477531 GRAMD1CQ8IYS0 662 aa16.84■□□□□ 0.29
CLDN11-204ENST00000477531 CELF5Q8N6W0 485 aaKnown RBP16.84■□□□□ 0.29
CLDN11-204ENST00000477531 BPIFB1Q8TDL5 484 aa16.84■□□□□ 0.29
CLDN11-204ENST00000477531 CGRRF1Q99675 332 aa16.84■□□□□ 0.29
CLDN11-204ENST00000477531 SYT15Q9BQS2 421 aa16.84■□□□□ 0.29
CLDN11-204ENST00000477531 IER2Q9BTL4 223 aa16.84■□□□□ 0.29
CLDN11-204ENST00000477531 MKNK1Q9BUB5 465 aa16.84■□□□□ 0.29
CLDN11-204ENST00000477531 MAGEC2Q9UBF1 373 aaPredicted RBP16.84■□□□□ 0.29
CLDN11-204ENST00000477531 CDH9Q9ULB4 789 aa16.84■□□□□ 0.29
CLDN11-204ENST00000477531 PTPRJQ12913 1337 aa16.84■□□□□ 0.29
CLDN11-204ENST00000477531 A0A1B0GVL5 298 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 FAM186AA6NE01 2351 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 SOBPA7XYQ1 873 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 PHACTR2O75167 634 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 CLSTN1O94985 981 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 MYL1P05976 194 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 PFKFB1P16118 471 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 TNNC1P63316 161 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 PPP2R5DQ14738 602 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 DDR2Q16832 855 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 CFAP221Q4G0U5 840 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 SCN4BQ8IWT1 228 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 CMTM8Q8IZV2 173 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 ADSSL1Q8N142 457 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 MAB21L3Q8N8X9 362 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 RSPRY1Q96DX4 576 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 SNX25Q9H3E2 840 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 LMAN1LQ9HAT1 526 aa16.83■□□□□ 0.28
CLDN11-204ENST00000477531 MYBPHLA2RUH7 354 aa16.82■□□□□ 0.28
CLDN11-204ENST00000477531 ARNTLO00327 626 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms