RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 CEP295Q9C0D2 2601 aa7.21□□□□□ -1.25
RTFDC1-206ENST00000477485 OTOL1A6NHN0 477 aaPredicted RBP7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 LAD1O00515 517 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 KHNYNO15037 678 aaKnown RBP7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 AKAP3O75969 853 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 APBB3O95704 486 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 PROS1P07225 676 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 HAPLN1P10915 354 aaPredicted RBP7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 DRD1P21728 446 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 DHPSP49366 369 aaPredicted RBP7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 AARSP49588 968 aaKnown RBP eCLIP7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 GPR15P49685 360 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 ACOT2P49753 483 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 TAF6P49848 677 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 GALK1P51570 392 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 NCKAP1LP55160 1127 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 NLRP12P59046 1061 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 SHC2P98077 582 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 TSPY1Q01534 308 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 COL9A2Q14055 689 aaPredicted RBP7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 DMC1Q14565 340 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 MTF1Q14872 753 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 ZBTB6Q15916 424 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 IL17AQ16552 155 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 PLA2G2CQ5R387 149 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 SH3PXD2AQ5TCZ1 1133 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 SPATA1Q5VX52 437 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 ANO7Q6IWH7 933 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 KIAA1211LQ6NV74 962 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 CYP2U1Q7Z449 544 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 GPBP1Q86WP2 473 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 DCP1BQ8IZD4 617 aaKnown RBP7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 SYT2Q8N9I0 419 aaPredicted RBP7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 TSTD1Q8NFU3 115 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 SPPL2BQ8TCT7 592 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 CD101Q93033 1021 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 ACDQ96AP0 544 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 PNMA5Q96PV4 448 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 LLPHQ9BRT6 129 aaKnown RBP7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 ZCWPW1Q9H0M4 648 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 DUSP15Q9H1R2 295 aaPredicted RBP7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 KIF9Q9HAQ2 790 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 IL21Q9HBE4 155 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 FBRSL1Q9HCM7 1045 aaKnown RBP7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 TMEM9BQ9NQ34 198 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 DUS2Q9NX74 493 aaKnown RBP7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 HSFX1Q9UBD0 423 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 TBX20Q9UMR3 447 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 PCDHB5Q9Y5E4 795 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 WNT6Q9Y6F9 365 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 PI4KAP42356 2102 aa7.21□□□□□ -1.26
RTFDC1-206ENST00000477485 ZFHX4Q86UP3 3567 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 FAM208BQ5VWN6 2430 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 TRAV19A0A0A6YYK7 116 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 CCDC163A0A0D9SF12 145 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 LNP1A1A4G5 178 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 TRDMT1O14717 391 aaKnown RBP7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 TM4SF5O14894 197 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 MAP3K13O43283 966 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 TBCAO75347 108 aaKnown RBP7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 CSH1P0DML2 217 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 CSH2P0DML3 217 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 DDX6P26196 483 aaKnown RBP eCLIP7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 GJA4P35212 333 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 PRPHP41219 470 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 MAPK8P45983 427 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 TOB1P50616 345 aaPredicted RBP7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 SLC12A3P55017 1021 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 NR1H3Q13133 447 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 KCNB1Q14721 858 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 PDGFRLQ15198 375 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 DDR2Q16832 855 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 SV2CQ496J9 727 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 FBXO43Q4G163 708 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 USP39Q53GS9 565 aaKnown RBP7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 C2orf27AQ580R0 203 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 WSCD1Q658N2 575 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 ADALQ6DHV7 355 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 ARMCX6Q7L4S7 300 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 LRRTM3Q86VH5 581 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 SCN4BQ8IWT1 228 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 CD302Q8IX05 232 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 C2orf15Q8WU43 125 aaKnown RBP7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 PIGKQ92643 395 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 ATP2A3Q93084 1043 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 CALML4Q96GE6 196 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 ZC3H10Q96K80 434 aaKnown RBP7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 ZNF560Q96MR9 790 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 FAM83CQ9BQN1 747 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 REEP2Q9BRK0 252 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 NTPCRQ9BSD7 190 aaKnown RBP7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 MMTAG2Q9BU76 263 aaKnown RBP7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 ADAM33Q9BZ11 813 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 PARVGQ9HBI0 331 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 DPP3Q9NY33 737 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 KCND2Q9NZV8 630 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 BCCIPQ9P287 314 aaKnown RBP eCLIP7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 UXTQ9UBK9 157 aaPredicted RBP7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 ZMYM5Q9UJ78 669 aa7.2□□□□□ -1.26
RTFDC1-206ENST00000477485 BAHCC1Q9P281 2608 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms