RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 GRM1Q13255 1194 aa5.26□□□□□ -1.57
UBR3-209ENST00000477461 RBM20Q5T481 1227 aaKnown RBP5.26□□□□□ -1.57
UBR3-209ENST00000477461 PTF1AQ7RTS3 328 aa5.26□□□□□ -1.57
UBR3-209ENST00000477461 TNPO1Q92973 898 aaKnown RBP5.26□□□□□ -1.57
UBR3-209ENST00000477461 CFAP20Q9Y6A4 193 aaKnown RBP5.26□□□□□ -1.57
UBR3-209ENST00000477461 FYCO1Q9BQS8 1478 aa5.26□□□□□ -1.57
UBR3-209ENST00000477461 TNKSO95271 1327 aa5.25□□□□□ -1.57
UBR3-209ENST00000477461 ABCC2Q92887 1545 aa5.25□□□□□ -1.57
UBR3-209ENST00000477461 SOX10P56693 466 aa5.25□□□□□ -1.57
UBR3-209ENST00000477461 TFF2Q03403 129 aa5.25□□□□□ -1.57
UBR3-209ENST00000477461 VPS53Q5VIR6 699 aa5.25□□□□□ -1.57
UBR3-209ENST00000477461 CYB5RLQ6IPT4 315 aa5.25□□□□□ -1.57
UBR3-209ENST00000477461 ZNF782Q6ZMW2 699 aaPredicted RBP5.25□□□□□ -1.57
UBR3-209ENST00000477461 PDSS2Q86YH6 399 aa5.25□□□□□ -1.57
UBR3-209ENST00000477461 C3orf20Q8ND61 904 aa5.25□□□□□ -1.57
UBR3-209ENST00000477461 PBKQ96KB5 322 aa5.25□□□□□ -1.57
UBR3-209ENST00000477461 SMAD5Q99717 465 aaKnown RBP5.25□□□□□ -1.57
UBR3-209ENST00000477461 SLC13A1Q9BZW2 595 aa5.25□□□□□ -1.57
UBR3-209ENST00000477461 WDR26Q9H7D7 661 aa5.25□□□□□ -1.57
UBR3-209ENST00000477461 CFAP97Q9P2B7 532 aa5.25□□□□□ -1.57
UBR3-209ENST00000477461 CCDC18Q5T9S5 1454 aa5.25□□□□□ -1.57
UBR3-209ENST00000477461 PLB1Q6P1J6 1458 aa5.25□□□□□ -1.57
UBR3-209ENST00000477461 ABCA8O94911 1581 aa5.25□□□□□ -1.57
UBR3-209ENST00000477461 SPATA31A3Q5VYP0 1347 aa5.24□□□□□ -1.57
UBR3-209ENST00000477461 PPM1DO15297 605 aa5.24□□□□□ -1.57
UBR3-209ENST00000477461 ITGALP20701 1170 aa5.24□□□□□ -1.57
UBR3-209ENST00000477461 MPGP29372 298 aa5.24□□□□□ -1.57
UBR3-209ENST00000477461 PRDX5P30044 214 aa5.24□□□□□ -1.57
UBR3-209ENST00000477461 BRDTQ58F21 947 aaPredicted RBP5.24□□□□□ -1.57
UBR3-209ENST00000477461 USP37Q86T82 979 aa5.24□□□□□ -1.57
UBR3-209ENST00000477461 VGLL2Q8N8G2 317 aa5.24□□□□□ -1.57
UBR3-209ENST00000477461 STAG1Q8WVM7 1258 aa5.24□□□□□ -1.57
UBR3-209ENST00000477461 ASPSCR1Q9BZE9 553 aa5.24□□□□□ -1.57
UBR3-209ENST00000477461 ARHGEF3Q9NR81 526 aa5.24□□□□□ -1.57
UBR3-209ENST00000477461 GNL3LQ9NVN8 582 aaKnown RBP5.24□□□□□ -1.57
UBR3-209ENST00000477461 SIDT1Q9NXL6 827 aaKnown RBP5.24□□□□□ -1.57
UBR3-209ENST00000477461 DDX56Q9NY93 547 aaKnown RBP5.24□□□□□ -1.57
UBR3-209ENST00000477461 EHD3Q9NZN3 535 aa5.24□□□□□ -1.57
UBR3-209ENST00000477461 SH3BP4Q9P0V3 963 aa5.24□□□□□ -1.57
UBR3-209ENST00000477461 RAD54BQ9Y620 910 aa5.24□□□□□ -1.57
UBR3-209ENST00000477461 UHRF1BP1LA0JNW5 1464 aa5.24□□□□□ -1.57
UBR3-209ENST00000477461 GCOM1H8Y6P7 765 aaPredicted RBP5.23□□□□□ -1.57
UBR3-209ENST00000477461 M0QYG6 137 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 FAM163BP0C2L3 166 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 JUPP14923 745 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 NDUFB7P17568 137 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 DRD4P21917 467 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 CD6P30203 668 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 PIK3CGP48736 1102 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 TOB1P50616 345 aaPredicted RBP5.23□□□□□ -1.57
UBR3-209ENST00000477461 ADKP55263 362 aaKnown RBP5.23□□□□□ -1.57
UBR3-209ENST00000477461 BOP1Q14137 746 aaKnown RBP5.23□□□□□ -1.57
UBR3-209ENST00000477461 MTX3Q5HYI7 312 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 ZNF425Q6IV72 752 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 ANKRD13AQ8IZ07 590 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 MIER2Q8N344 545 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 PCSK9Q8NBP7 692 aaKnown RBP5.23□□□□□ -1.57
UBR3-209ENST00000477461 FAM136AQ96C01 138 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 CNPPD1Q9BV87 410 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 ALG8Q9BVK2 526 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 SERHLQ9NQF3 203 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 ABCF2Q9UG63 623 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 PCDHA1Q9Y5I3 950 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 NUP153P49790 1475 aaKnown RBP5.23□□□□□ -1.57
UBR3-209ENST00000477461 CFAP43Q8NDM7 1665 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 ADCY10Q96PN6 1610 aa5.23□□□□□ -1.57
UBR3-209ENST00000477461 EPRSP07814 1512 aaKnown RBP5.23□□□□□ -1.57
UBR3-209ENST00000477461 TIAM1Q13009 1591 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 TARM1B6A8C7 271 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 SMIM22K7EJ46 135 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 ZRANB2O95218 330 aaKnown RBP eCLIP5.22□□□□□ -1.57
UBR3-209ENST00000477461 AHSGP02765 367 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 PDGFRBP09619 1106 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 PRR35P0CG20 571 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 NHLRC4P0CG21 123 aaPredicted RBP5.22□□□□□ -1.57
UBR3-209ENST00000477461 RARBP10826 455 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 PDCP20941 246 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 GCLCP48506 637 aaPredicted RBP5.22□□□□□ -1.57
UBR3-209ENST00000477461 SP2Q02086 613 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 BMPR2Q13873 1038 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 EZH2Q15910 746 aaKnown RBP5.22□□□□□ -1.57
UBR3-209ENST00000477461 PLAC9Q5JTB6 97 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 SUMO4Q6EEV6 95 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 HEATR3Q7Z4Q2 680 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 C1QL2Q7Z5L3 287 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.22□□□□□ -1.57
UBR3-209ENST00000477461 FAM46DQ8NEK8 389 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 SEMA6DQ8NFY4 1073 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 KLHDC4Q8TBB5 520 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 OSBPL9Q96SU4 736 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 SH2D3AQ9BRG2 576 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 TINAGL1Q9GZM7 467 aaPredicted RBP5.22□□□□□ -1.57
UBR3-209ENST00000477461 GPR35Q9HC97 309 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 SERTAD4Q9NUC0 356 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 ZNF70Q9UC06 446 aaPredicted RBP5.22□□□□□ -1.57
UBR3-209ENST00000477461 SERGEFQ9UGK8 458 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 LRRIQ1Q96JM4 1722 aa5.22□□□□□ -1.57
UBR3-209ENST00000477461 ZCCHC11Q5TAX3 1644 aaKnown RBP5.22□□□□□ -1.57
UBR3-209ENST00000477461 CDK13Q14004 1512 aaKnown RBP5.22□□□□□ -1.57
UBR3-209ENST00000477461 MTUS2Q5JR59 1369 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms