RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 GTF3C6Q969F1 213 aa4.96□□□□□ -1.62
PIKFYVE-209ENST00000477200 THOC1Q96FV9 657 aaKnown RBP4.96□□□□□ -1.62
PIKFYVE-209ENST00000477200 TIMP4Q99727 224 aa4.96□□□□□ -1.62
PIKFYVE-209ENST00000477200 ZNF215Q9UL58 517 aaPredicted RBP4.96□□□□□ -1.62
PIKFYVE-209ENST00000477200 ODF2LQ9ULJ1 636 aa4.96□□□□□ -1.62
PIKFYVE-209ENST00000477200 PYCARDQ9ULZ3 195 aa4.96□□□□□ -1.62
PIKFYVE-209ENST00000477200 DMTF1Q9Y222 760 aa4.96□□□□□ -1.62
PIKFYVE-209ENST00000477200 SIK3Q9Y2K2 1263 aa4.96□□□□□ -1.62
PIKFYVE-209ENST00000477200 PTPN23Q9H3S7 1636 aa4.96□□□□□ -1.62
PIKFYVE-209ENST00000477200 RPTORQ8N122 1335 aa4.96□□□□□ -1.62
PIKFYVE-209ENST00000477200 KIF21AQ7Z4S6 1674 aa4.96□□□□□ -1.62
PIKFYVE-209ENST00000477200 NKTRP30414 1462 aaKnown RBP4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 PLB1Q6P1J6 1458 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 RAPGEF2Q9Y4G8 1499 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 RPAP1Q9BWH6 1393 aaPredicted RBP4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 CADPSQ9ULU8 1353 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 A6NNZ2 444 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 GOLGA6L19H0YKK7 550 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 EXOC5O00471 708 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 LIN7AO14910 233 aaPredicted RBP4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 E2F6O75461 281 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 IGHDP01880 384 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 FESP07332 822 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 TUBBP07437 444 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 HOXB6P17509 224 aaKnown RBP4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 SLC6A2P23975 617 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 GCKP35557 465 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 CCNHP51946 323 aaPredicted RBP4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 NEK4P51957 841 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 VAV2P52735 878 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 LGALS4P56470 323 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 IFT88Q13099 833 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 PLCB4Q15147 1175 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 PTPN14Q15678 1187 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 TPD52L1Q16890 204 aaPredicted RBP4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 MST1LQ2TV78 715 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 TUBB8Q3ZCM7 444 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 RRP12Q5JTH9 1297 aaKnown RBP4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 CCDC181Q5TID7 509 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 ISM2Q6H9L7 571 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 LRRC31Q6UY01 552 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 CCDC80Q76M96 950 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 IQCA1Q86XH1 822 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 THNSL2Q86YJ6 484 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 MYLK4Q86YV6 388 aaPredicted RBP4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 CEP112Q8N8E3 955 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 SMC1BQ8NDV3 1235 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 ATL2Q8NHH9 583 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 FAM81AQ8TBF8 368 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 ZFAND2BQ8WV99 257 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 JAKMIP2Q96AA8 810 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 BICD1Q96G01 975 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 GPR101Q96P66 508 aaPredicted RBP4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 KCTD10Q9H3F6 313 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 UNC45AQ9H3U1 944 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 ATP6V0A4Q9HBG4 840 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 CPNE5Q9HCH3 593 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 RGL1Q9NZL6 768 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 ADAM21Q9UKJ8 722 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 THRAP3Q9Y2W1 955 aaKnown RBP4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 ENTPD2Q9Y5L3 495 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 TOP2AP11388 1531 aaKnown RBP4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 E9PCH4 1651 aa4.95□□□□□ -1.62
PIKFYVE-209ENST00000477200 ATP10AO60312 1499 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 CUX1P39880 1505 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 CFAP43Q8NDM7 1665 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 GOLGA6L9A6NEM1 432 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 POLR3GO15318 223 aaPredicted RBP4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 CAVIN2O95810 425 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 HARSP12081 509 aaKnown RBP4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 EZRP15311 586 aaKnown RBP4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 WT1P19544 449 aaPredicted RBP4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 POU3F2P20265 443 aaPredicted RBP4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 ITPKBP27987 946 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 GCLCP48506 637 aaPredicted RBP4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 TRPC1P48995 793 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 UBXN2BQ14CS0 331 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 GPR162Q16538 588 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 SRSF7Q16629 238 aaKnown RBP eCLIP4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 KIAA1614Q5VZ46 1190 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 AFMIDQ63HM1 303 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 KIAA0895LQ68EN5 471 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 GET4Q7L5D6 327 aaPredicted RBP4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 OTUD6AQ7L8S5 288 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 FAM114A1Q8IWE2 563 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 IQCF2Q8IXL9 164 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 DRC7Q8IY82 874 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 MYOCDQ8IZQ8 938 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 GBP7Q8N8V2 638 aaPredicted RBP4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 SSH3Q8TE77 659 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 HASPINQ8TF76 798 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 LZICQ8WZA0 190 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 SARAFQ96BY9 339 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 MRI1Q9BV20 369 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 PDRG1Q9NUG6 133 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 SYNMO15061 1565 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 ZNF521Q96K83 1311 aa4.94□□□□□ -1.62
PIKFYVE-209ENST00000477200 PRDM15P57071 1507 aaPredicted RBP4.93□□□□□ -1.62
PIKFYVE-209ENST00000477200 EFCAB8A8MWE9 144 aa4.93□□□□□ -1.62
PIKFYVE-209ENST00000477200 ERC2O15083 957 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms