RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 TGM1P22735 817 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 CDC25CP30307 473 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 ABCD1P33897 745 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 PXNP49023 591 aaPredicted RBP12.55□□□□□ -0.4
VARS2-208ENST00000477052 CCR3P51677 355 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 NLRP12P59046 1061 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 FOXK2Q01167 660 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 SPEM2Q0P670 501 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 SLC39A14Q15043 492 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 ARHGAP29Q52LW3 1261 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 CCDC73Q6ZRK6 1079 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 DCP1BQ8IZD4 617 aaKnown RBP12.55□□□□□ -0.4
VARS2-208ENST00000477052 CMTM8Q8IZV2 173 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 OR5B17Q8NGF7 314 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 SPPL2BQ8TCT7 592 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 USP13Q92995 863 aaPredicted RBP12.55□□□□□ -0.4
VARS2-208ENST00000477052 ZNF560Q96MR9 790 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 GCNAQ96QF7 691 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 CYP2S1Q96SQ9 504 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 EBF3Q9H4W6 596 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 C8orf33Q9H7E9 229 aaPredicted RBP12.55□□□□□ -0.4
VARS2-208ENST00000477052 DDX43Q9NXZ2 648 aaKnown RBP12.55□□□□□ -0.4
VARS2-208ENST00000477052 SEL1LQ9UBV2 794 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 GTF3C4Q9UKN8 822 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 PCDHB13Q9Y5F0 798 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 SNX9Q9Y5X1 595 aa12.55□□□□□ -0.4
VARS2-208ENST00000477052 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.54□□□□□ -0.4
VARS2-208ENST00000477052 K7ESF4 209 aa12.54□□□□□ -0.4
VARS2-208ENST00000477052 EXTL3O43909 919 aa12.54□□□□□ -0.4
VARS2-208ENST00000477052 FGF19O95750 216 aa12.54□□□□□ -0.4
VARS2-208ENST00000477052 PAX3P23760 479 aa12.54□□□□□ -0.4
VARS2-208ENST00000477052 CASP1P29466 404 aa12.54□□□□□ -0.4
VARS2-208ENST00000477052 HOXD13P35453 343 aa12.54□□□□□ -0.4
VARS2-208ENST00000477052 TSPY1Q01534 308 aa12.54□□□□□ -0.4
VARS2-208ENST00000477052 PUM1Q14671 1186 aaKnown RBP eCLIP12.54□□□□□ -0.4
VARS2-208ENST00000477052 RALGPS2Q86X27 583 aaPredicted RBP12.54□□□□□ -0.4
VARS2-208ENST00000477052 CBWD2Q8IUF1 395 aa12.54□□□□□ -0.4
VARS2-208ENST00000477052 SCN4BQ8IWT1 228 aa12.54□□□□□ -0.4
VARS2-208ENST00000477052 SPEM1Q8N4L4 309 aa12.54□□□□□ -0.4
VARS2-208ENST00000477052 CHFRQ96EP1 664 aa12.54□□□□□ -0.4
VARS2-208ENST00000477052 SLC22A12Q96S37 553 aa12.54□□□□□ -0.4
VARS2-208ENST00000477052 FBRSL1Q9HCM7 1045 aaKnown RBP12.54□□□□□ -0.4
VARS2-208ENST00000477052 TRPC7Q9HCX4 862 aa12.54□□□□□ -0.4
VARS2-208ENST00000477052 HPS4Q9NQG7 708 aa12.54□□□□□ -0.4
VARS2-208ENST00000477052 HSFX1Q9UBD0 423 aa12.54□□□□□ -0.4
VARS2-208ENST00000477052 ATG2BQ96BY7 2078 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 FRMD3A2A2Y4 597 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 STX6O43752 255 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 HUS1O60921 280 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 TADA3O75528 432 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 TMEM191BP0C7N4 346 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 GARTP22102 1010 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 LMO2P25791 158 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 AVPR1AP37288 418 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 PSMC1P62191 440 aaKnown RBP12.53□□□□□ -0.4
VARS2-208ENST00000477052 LRRC32Q14392 662 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 STK38Q15208 465 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 SOWAHAQ2M3V2 549 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 ITPRIPL2Q3MIP1 535 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 INTS6LQ5JSJ4 861 aaKnown RBP12.53□□□□□ -0.4
VARS2-208ENST00000477052 ADGRF2Q8IZF7 708 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 CELF5Q8N6W0 485 aaKnown RBP12.53□□□□□ -0.4
VARS2-208ENST00000477052 RDH13Q8NBN7 331 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 C2orf15Q8WU43 125 aaKnown RBP12.53□□□□□ -0.4
VARS2-208ENST00000477052 CACTINQ8WUQ7 758 aaKnown RBP12.53□□□□□ -0.4
VARS2-208ENST00000477052 DHX58Q96C10 678 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 PKMYT1Q99640 499 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 OLFML3Q9NRN5 406 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 THG1LQ9NWX6 298 aaKnown RBP12.53□□□□□ -0.4
VARS2-208ENST00000477052 DLL3Q9NYJ7 618 aa12.53□□□□□ -0.4
VARS2-208ENST00000477052 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.53□□□□□ -0.4
VARS2-208ENST00000477052 NCOR2Q9Y618 2525 aa12.52□□□□□ -0.4
VARS2-208ENST00000477052 DCDC2BA2VCK2 349 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 PDGFRBP09619 1106 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 PNPLA4P41247 253 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 NASPP49321 788 aaPredicted RBP12.52□□□□□ -0.41
VARS2-208ENST00000477052 ATXN1P54253 815 aaKnown RBP12.52□□□□□ -0.41
VARS2-208ENST00000477052 NRLP54845 237 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 RBP5P82980 135 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 POU5F1Q01860 360 aaKnown RBP12.52□□□□□ -0.41
VARS2-208ENST00000477052 CCINQ13939 588 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 SIM2Q14190 667 aaPredicted RBP12.52□□□□□ -0.41
VARS2-208ENST00000477052 CCDC6Q16204 474 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 FSTL4Q6MZW2 842 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 MAMSTRQ6ZN01 415 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 NT5DC4Q86YG4 428 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 CCDC65Q8IXS2 484 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 GPD1LQ8N335 351 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 LINC00301Q8NCQ3 95 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 SECISBP2LQ93073 1101 aaKnown RBP12.52□□□□□ -0.41
VARS2-208ENST00000477052 ELMO3Q96BJ8 720 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 FAM83CQ9BQN1 747 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 ACBD6Q9BR61 282 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 FAM126AQ9BYI3 521 aaPredicted RBP12.52□□□□□ -0.41
VARS2-208ENST00000477052 TDP1Q9NUW8 608 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 OBP2AQ9NY56 170 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 GMEB2Q9UKD1 530 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 ITGA11Q9UKX5 1188 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 RAB23Q9ULC3 237 aa12.52□□□□□ -0.41
VARS2-208ENST00000477052 OBSL1O75147 1896 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms