RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 VCPIP1Q96JH7 1222 aa30.58■■■□□ 2.49
VEGFA-211ENST00000476772 NUP85Q9BW27 656 aa30.58■■■□□ 2.49
VEGFA-211ENST00000476772 RNF216Q9NWF9 866 aaPredicted RBP30.58■■■□□ 2.49
VEGFA-211ENST00000476772 CYTH4Q9UIA0 394 aa30.58■■■□□ 2.49
VEGFA-211ENST00000476772 JRKLQ9Y4A0 524 aa30.58■■■□□ 2.49
VEGFA-211ENST00000476772 PAX3P23760 479 aa30.58■■■□□ 2.49
VEGFA-211ENST00000476772 ACAT1P24752 427 aaKnown RBP30.58■■■□□ 2.49
VEGFA-211ENST00000476772 HADHBP55084 474 aaKnown RBP30.58■■■□□ 2.49
VEGFA-211ENST00000476772 MFSD5Q6N075 450 aa30.58■■■□□ 2.49
VEGFA-211ENST00000476772 LLGL2Q6P1M3 1020 aa30.58■■■□□ 2.49
VEGFA-211ENST00000476772 LRRC57Q8N9N7 239 aa30.58■■■□□ 2.49
VEGFA-211ENST00000476772 UBA3Q8TBC4 463 aa30.58■■■□□ 2.49
VEGFA-211ENST00000476772 RSPH1Q8WYR4 309 aa30.58■■■□□ 2.49
VEGFA-211ENST00000476772 TNIP3Q96KP6 325 aa30.58■■■□□ 2.49
VEGFA-211ENST00000476772 GOLPH3Q9H4A6 298 aa30.58■■■□□ 2.49
VEGFA-211ENST00000476772 NRDE2Q9H7Z3 1164 aa30.58■■■□□ 2.49
VEGFA-211ENST00000476772 AVENQ9NQS1 362 aaPredicted RBP30.58■■■□□ 2.49
VEGFA-211ENST00000476772 DDX43Q9NXZ2 648 aaKnown RBP30.58■■■□□ 2.49
VEGFA-211ENST00000476772 FNDC1Q4ZHG4 1894 aaPredicted RBP30.58■■■□□ 2.49
VEGFA-211ENST00000476772 M0QZQ0 153 aa30.57■■■□□ 2.48
VEGFA-211ENST00000476772 FTCDO95954 541 aa30.57■■■□□ 2.48
VEGFA-211ENST00000476772 ARHGAP17Q68EM7 881 aa30.57■■■□□ 2.48
VEGFA-211ENST00000476772 DNAI2Q9GZS0 605 aa30.57■■■□□ 2.48
VEGFA-211ENST00000476772 PRG3Q9Y2Y8 225 aaPredicted RBP30.57■■■□□ 2.48
VEGFA-211ENST00000476772 ALPK3Q96L96 1907 aa30.56■■■□□ 2.48
VEGFA-211ENST00000476772 TBKBP1A7MCY6 615 aa30.56■■■□□ 2.48
VEGFA-211ENST00000476772 MTA2O94776 668 aa30.56■■■□□ 2.48
VEGFA-211ENST00000476772 UPP2O95045 317 aa30.56■■■□□ 2.48
VEGFA-211ENST00000476772 GPD2P43304 727 aa30.56■■■□□ 2.48
VEGFA-211ENST00000476772 LHX1P48742 406 aa30.56■■■□□ 2.48
VEGFA-211ENST00000476772 PSMC1P62191 440 aaKnown RBP30.56■■■□□ 2.48
VEGFA-211ENST00000476772 LIN9Q5TKA1 542 aa30.56■■■□□ 2.48
VEGFA-211ENST00000476772 TMEM199Q8N511 208 aa30.56■■■□□ 2.48
VEGFA-211ENST00000476772 B3GALNT2Q8NCR0 500 aa30.56■■■□□ 2.48
VEGFA-211ENST00000476772 ZNF564Q8TBZ8 553 aaPredicted RBP30.56■■■□□ 2.48
VEGFA-211ENST00000476772 SUSD3Q96L08 255 aa30.56■■■□□ 2.48
VEGFA-211ENST00000476772 UVRAGQ9P2Y5 699 aa30.56■■■□□ 2.48
VEGFA-211ENST00000476772 HCSTQ9UBK5 93 aa30.56■■■□□ 2.48
VEGFA-211ENST00000476772 TMEM189-UBE2V1I3L0A0 370 aa30.55■■■□□ 2.48
VEGFA-211ENST00000476772 BUB1BO60566 1050 aaPredicted RBP30.55■■■□□ 2.48
VEGFA-211ENST00000476772 CCDC130P13994 396 aa30.55■■■□□ 2.48
VEGFA-211ENST00000476772 PTPN20Q4JDL3 420 aa30.55■■■□□ 2.48
VEGFA-211ENST00000476772 ERICH1Q86X53 443 aa30.55■■■□□ 2.48
VEGFA-211ENST00000476772 MRPL9Q9BYD2 267 aaKnown RBP30.55■■■□□ 2.48
VEGFA-211ENST00000476772 NCK2O43639 380 aa30.55■■■□□ 2.48
VEGFA-211ENST00000476772 ATP2C2O75185 946 aa30.55■■■□□ 2.48
VEGFA-211ENST00000476772 CYP11A1P05108 521 aa30.55■■■□□ 2.48
VEGFA-211ENST00000476772 CALB1P05937 261 aa30.55■■■□□ 2.48
VEGFA-211ENST00000476772 KIAA0319Q5VV43 1072 aa30.55■■■□□ 2.48
VEGFA-211ENST00000476772 TTC30AQ86WT1 665 aa30.55■■■□□ 2.48
VEGFA-211ENST00000476772 ABHD14A-ACY1A0A1B0GW23 586 aa30.54■■■□□ 2.48
VEGFA-211ENST00000476772 PFKMP08237 780 aa30.54■■■□□ 2.48
VEGFA-211ENST00000476772 AMPD2Q01433 879 aa30.54■■■□□ 2.48
VEGFA-211ENST00000476772 CCDC142Q17RM4 750 aa30.54■■■□□ 2.48
VEGFA-211ENST00000476772 PKDCCQ504Y2 493 aa30.54■■■□□ 2.48
VEGFA-211ENST00000476772 PAPD7Q5XG87 772 aaKnown RBP30.54■■■□□ 2.48
VEGFA-211ENST00000476772 SLFN11Q7Z7L1 901 aa30.54■■■□□ 2.48
VEGFA-211ENST00000476772 DAAM2Q86T65 1068 aa30.54■■■□□ 2.48
VEGFA-211ENST00000476772 L2HGDHQ9H9P8 463 aa30.54■■■□□ 2.48
VEGFA-211ENST00000476772 RIOK3O14730 519 aaKnown RBP30.53■■■□□ 2.48
VEGFA-211ENST00000476772 ACRP10323 421 aa30.53■■■□□ 2.48
VEGFA-211ENST00000476772 PTPN1P18031 435 aaKnown RBP30.53■■■□□ 2.48
VEGFA-211ENST00000476772 METTL23Q86XA0 190 aa30.53■■■□□ 2.48
VEGFA-211ENST00000476772 SPATA18Q8TC71 538 aa30.53■■■□□ 2.48
VEGFA-211ENST00000476772 CALR3Q96L12 384 aaKnown RBP30.53■■■□□ 2.48
VEGFA-211ENST00000476772 CPXM1Q96SM3 734 aa30.53■■■□□ 2.48
VEGFA-211ENST00000476772 HESX1Q9UBX0 185 aa30.53■■■□□ 2.48
VEGFA-211ENST00000476772 TJP2Q9UDY2 1190 aa30.53■■■□□ 2.48
VEGFA-211ENST00000476772 DSEQ9UL01 958 aa30.53■■■□□ 2.48
VEGFA-211ENST00000476772 NRP1O14786 923 aa30.52■■■□□ 2.48
VEGFA-211ENST00000476772 ADORA2BP29275 332 aa30.52■■■□□ 2.48
VEGFA-211ENST00000476772 PDCLQ13371 301 aa30.52■■■□□ 2.48
VEGFA-211ENST00000476772 CYP4A22Q5TCH4 519 aa30.52■■■□□ 2.48
VEGFA-211ENST00000476772 MEI1Q5TIA1 1274 aa30.52■■■□□ 2.48
VEGFA-211ENST00000476772 SYCE1Q8N0S2 351 aa30.52■■■□□ 2.48
VEGFA-211ENST00000476772 SYT15Q9BQS2 421 aa30.52■■■□□ 2.48
VEGFA-211ENST00000476772 TLR10Q9BXR5 811 aa30.52■■■□□ 2.48
VEGFA-211ENST00000476772 MRFAP1Q9Y605 127 aa30.52■■■□□ 2.48
VEGFA-211ENST00000476772 PTPROQ16827 1216 aa30.52■■■□□ 2.48
VEGFA-211ENST00000476772 PLEKHA7Q6IQ23 1121 aa30.52■■■□□ 2.48
VEGFA-211ENST00000476772 LRRC43Q8N309 656 aa30.52■■■□□ 2.48
VEGFA-211ENST00000476772 SLC2A14Q8TDB8 520 aa30.52■■■□□ 2.48
VEGFA-211ENST00000476772 BTBD6Q96KE9 485 aa30.52■■■□□ 2.48
VEGFA-211ENST00000476772 RTP3Q9BQQ7 232 aa30.52■■■□□ 2.48
VEGFA-211ENST00000476772 CRTAC1Q9NQ79 661 aa30.52■■■□□ 2.48
VEGFA-211ENST00000476772 PCDHB8Q9UN66 801 aa30.52■■■□□ 2.48
VEGFA-211ENST00000476772 PACSIN2Q9UNF0 486 aaPredicted RBP30.52■■■□□ 2.48
VEGFA-211ENST00000476772 ARHGEF37A1IGU5 675 aa30.51■■■□□ 2.47
VEGFA-211ENST00000476772 TKTP29401 623 aaKnown RBP30.51■■■□□ 2.47
VEGFA-211ENST00000476772 SLC11A1P49279 550 aa30.51■■■□□ 2.47
VEGFA-211ENST00000476772 MDH1BQ5I0G3 518 aa30.51■■■□□ 2.47
VEGFA-211ENST00000476772 CDH9Q9ULB4 789 aa30.51■■■□□ 2.47
VEGFA-211ENST00000476772 DGKIO75912 1065 aa30.5■■■□□ 2.47
VEGFA-211ENST00000476772 TYMPP19971 482 aa30.5■■■□□ 2.47
VEGFA-211ENST00000476772 DEFB103AP81534 67 aa30.5■■■□□ 2.47
VEGFA-211ENST00000476772 MAMLD1Q13495 774 aa30.5■■■□□ 2.47
VEGFA-211ENST00000476772 TOP1MTQ969P6 601 aa30.5■■■□□ 2.47
VEGFA-211ENST00000476772 ABCB6Q9NP58 842 aa30.5■■■□□ 2.47
VEGFA-211ENST00000476772 ANAPC7Q9UJX3 599 aa30.5■■■□□ 2.47
VEGFA-211ENST00000476772 SCINQ9Y6U3 715 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms