RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 FAM84AQ96KN4 292 aa17.4■□□□□ 0.38
COL1A1-205ENST00000476387 SPATA6Q9NWH7 488 aaPredicted RBP17.4■□□□□ 0.38
COL1A1-205ENST00000476387 CIZ1Q9ULV3 898 aaPredicted RBP17.4■□□□□ 0.38
COL1A1-205ENST00000476387 COL4A3Q01955 1670 aa17.39■□□□□ 0.37
COL1A1-205ENST00000476387 FANCMQ8IYD8 2048 aa17.39■□□□□ 0.37
COL1A1-205ENST00000476387 A0A1W2PRU2 124 aa17.39■□□□□ 0.37
COL1A1-205ENST00000476387 SHISA7A6NL88 538 aa17.39■□□□□ 0.37
COL1A1-205ENST00000476387 LAMTOR5O43504 91 aa17.39■□□□□ 0.37
COL1A1-205ENST00000476387 HUS1O60921 280 aa17.39■□□□□ 0.37
COL1A1-205ENST00000476387 RHOBTB3O94955 611 aa17.39■□□□□ 0.37
COL1A1-205ENST00000476387 LMNAP02545 664 aaKnown RBP17.39■□□□□ 0.37
COL1A1-205ENST00000476387 TARSP26639 723 aaKnown RBP17.39■□□□□ 0.37
COL1A1-205ENST00000476387 VIPR2P41587 438 aa17.39■□□□□ 0.37
COL1A1-205ENST00000476387 MYO1EQ12965 1108 aa17.39■□□□□ 0.37
COL1A1-205ENST00000476387 PSMD6Q15008 389 aa17.39■□□□□ 0.37
COL1A1-205ENST00000476387 WSCD1Q658N2 575 aa17.39■□□□□ 0.37
COL1A1-205ENST00000476387 OR5B17Q8NGF7 314 aa17.39■□□□□ 0.37
COL1A1-205ENST00000476387 CCDC127Q96BQ5 260 aa17.39■□□□□ 0.37
COL1A1-205ENST00000476387 CGRRF1Q99675 332 aa17.39■□□□□ 0.37
COL1A1-205ENST00000476387 ZNF334Q9HCZ1 680 aaPredicted RBP17.39■□□□□ 0.37
COL1A1-205ENST00000476387 SIX4Q9UIU6 781 aa17.39■□□□□ 0.37
COL1A1-205ENST00000476387 R4GN57 208 aa17.39■□□□□ 0.37
COL1A1-205ENST00000476387 PTPRJQ12913 1337 aa17.39■□□□□ 0.37
COL1A1-205ENST00000476387 OTOGLQ3ZCN5 2332 aa17.38■□□□□ 0.37
COL1A1-205ENST00000476387 HEPACAM2A8MVW5 462 aa17.38■□□□□ 0.37
COL1A1-205ENST00000476387 PDXKO00764 312 aa17.38■□□□□ 0.37
COL1A1-205ENST00000476387 ZNF263O14978 683 aa17.38■□□□□ 0.37
COL1A1-205ENST00000476387 WEE1P30291 646 aa17.38■□□□□ 0.37
COL1A1-205ENST00000476387 GDI1P31150 447 aa17.38■□□□□ 0.37
COL1A1-205ENST00000476387 MLLT6P55198 1093 aaPredicted RBP17.38■□□□□ 0.37
COL1A1-205ENST00000476387 FAM160A1Q05DH4 1040 aa17.38■□□□□ 0.37
COL1A1-205ENST00000476387 KCNB1Q14721 858 aa17.38■□□□□ 0.37
COL1A1-205ENST00000476387 VEPH1Q14D04 833 aa17.38■□□□□ 0.37
COL1A1-205ENST00000476387 GAREM2Q75VX8 874 aa17.38■□□□□ 0.37
COL1A1-205ENST00000476387 DCP1BQ8IZD4 617 aaKnown RBP17.38■□□□□ 0.37
COL1A1-205ENST00000476387 FMR1NBQ8N0W7 255 aaPredicted RBP17.38■□□□□ 0.37
COL1A1-205ENST00000476387 ZNF687Q8N1G0 1237 aa17.38■□□□□ 0.37
COL1A1-205ENST00000476387 TMEM86AQ8N2M4 240 aa17.38■□□□□ 0.37
COL1A1-205ENST00000476387 SPPL2BQ8TCT7 592 aa17.38■□□□□ 0.37
COL1A1-205ENST00000476387 ARNTLO00327 626 aa17.37■□□□□ 0.37
COL1A1-205ENST00000476387 CALUO43852 315 aaPredicted RBP17.37■□□□□ 0.37
COL1A1-205ENST00000476387 SOAT2O75908 522 aa17.37■□□□□ 0.37
COL1A1-205ENST00000476387 ANP32AP39687 249 aaKnown RBP17.37■□□□□ 0.37
COL1A1-205ENST00000476387 TSPY1Q01534 308 aa17.37■□□□□ 0.37
COL1A1-205ENST00000476387 FCHO2Q0JRZ9 810 aa17.37■□□□□ 0.37
COL1A1-205ENST00000476387 FZD5Q13467 585 aa17.37■□□□□ 0.37
COL1A1-205ENST00000476387 MGAT5BQ3V5L5 792 aa17.37■□□□□ 0.37
COL1A1-205ENST00000476387 ARHGAP15Q53QZ3 475 aa17.37■□□□□ 0.37
COL1A1-205ENST00000476387 CXorf38Q8TB03 319 aa17.37■□□□□ 0.37
COL1A1-205ENST00000476387 MSANTD3Q96H12 275 aa17.37■□□□□ 0.37
COL1A1-205ENST00000476387 HPDLQ96IR7 371 aa17.37■□□□□ 0.37
COL1A1-205ENST00000476387 SEPT5Q99719 369 aaPredicted RBP17.37■□□□□ 0.37
COL1A1-205ENST00000476387 IER2Q9BTL4 223 aa17.37■□□□□ 0.37
COL1A1-205ENST00000476387 KCTD10Q9H3F6 313 aa17.37■□□□□ 0.37
COL1A1-205ENST00000476387 OBP2AQ9NY56 170 aa17.37■□□□□ 0.37
COL1A1-205ENST00000476387 HOOK1Q9UJC3 728 aaKnown RBP17.37■□□□□ 0.37
COL1A1-205ENST00000476387 SNX9Q9Y5X1 595 aa17.37■□□□□ 0.37
COL1A1-205ENST00000476387 PATJQ8NI35 1801 aa17.37■□□□□ 0.37
COL1A1-205ENST00000476387 COL4A2P08572 1712 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 GPR179Q6PRD1 2367 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 CHADO15335 359 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 NR3C1P04150 777 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 HAPLN1P10915 354 aaPredicted RBP17.36■□□□□ 0.37
COL1A1-205ENST00000476387 ATF6P18850 670 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 GABRR2P28476 465 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 CDC25CP30307 473 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 MYL7Q01449 175 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 C1orf228Q6PIY5 440 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 TRAPPC11Q7Z392 1133 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 LRRTM3Q86VH5 581 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 SLC9A9Q8IVB4 645 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 ARID3BQ8IVW6 561 aaPredicted RBP17.36■□□□□ 0.37
COL1A1-205ENST00000476387 YAF2Q8IY57 180 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 ADGRF2Q8IZF7 708 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 PDCL2Q8N4E4 241 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 TOP6BLQ8N6T0 577 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 SPATA18Q8TC71 538 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 LPIN3Q9BQK8 851 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 MKNK1Q9BUB5 465 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 ATXN3LQ9H3M9 355 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 PRMT8Q9NR22 394 aaPredicted RBP17.36■□□□□ 0.37
COL1A1-205ENST00000476387 RMND1Q9NWS8 449 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 GDAP2Q9NXN4 497 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 ZMYM5Q9UJ78 669 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 L1RE1Q9UN81 338 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 PCDHGA2Q9Y5H1 932 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 PIAS3Q9Y6X2 628 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 NCANO14594 1321 aa17.36■□□□□ 0.37
COL1A1-205ENST00000476387 CLSTN1O94985 981 aa17.35■□□□□ 0.37
COL1A1-205ENST00000476387 PNOCQ13519 176 aa17.35■□□□□ 0.37
COL1A1-205ENST00000476387 NFE2Q16621 373 aaPredicted RBP17.35■□□□□ 0.37
COL1A1-205ENST00000476387 STXBP5Q5T5C0 1151 aa17.35■□□□□ 0.37
COL1A1-205ENST00000476387 GPR158Q5T848 1215 aa17.35■□□□□ 0.37
COL1A1-205ENST00000476387 CEP135Q66GS9 1140 aa17.35■□□□□ 0.37
COL1A1-205ENST00000476387 MAMSTRQ6ZN01 415 aa17.35■□□□□ 0.37
COL1A1-205ENST00000476387 GUF1Q8N442 669 aaKnown RBP17.35■□□□□ 0.37
COL1A1-205ENST00000476387 FAM200AQ8TCP9 573 aa17.35■□□□□ 0.37
COL1A1-205ENST00000476387 FAM3CQ92520 227 aa17.35■□□□□ 0.37
COL1A1-205ENST00000476387 RSPRY1Q96DX4 576 aa17.35■□□□□ 0.37
COL1A1-205ENST00000476387 GCNAQ96QF7 691 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms