RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 USP18Q9UMW8 372 aa14.13□□□□□ -0.15
MRPL55-228ENST00000476267 L1RE1Q9UN81 338 aa14.13□□□□□ -0.15
MRPL55-228ENST00000476267 PCDHB5Q9Y5E4 795 aa14.13□□□□□ -0.15
MRPL55-228ENST00000476267 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.13□□□□□ -0.15
MRPL55-228ENST00000476267 ANAPC1Q9H1A4 1944 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 VPS37CA5D8V6 355 aaPredicted RBP14.12□□□□□ -0.15
MRPL55-228ENST00000476267 NOL4O94818 638 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 ITGB3P05106 788 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 GARTP22102 1010 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 DDX6P26196 483 aaKnown RBP eCLIP14.12□□□□□ -0.15
MRPL55-228ENST00000476267 POLR2BP30876 1174 aaKnown RBP14.12□□□□□ -0.15
MRPL55-228ENST00000476267 SIM2Q14190 667 aaPredicted RBP14.12□□□□□ -0.15
MRPL55-228ENST00000476267 CCDC142Q17RM4 750 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 TMEM196Q5HYL7 178 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 FSTL4Q6MZW2 842 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 FAM173BQ6P4H8 233 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 LIMS2Q7Z4I7 341 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 WDR5BQ86VZ2 330 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 OSTM1Q86WC4 334 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 LRRC52Q8N7C0 313 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 SAAL1Q96ER3 474 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 TRMT2BQ96GJ1 504 aaKnown RBP14.12□□□□□ -0.15
MRPL55-228ENST00000476267 MYRFLQ96LU7 910 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 GCNAQ96QF7 691 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 ACCSQ96QU6 501 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 ACBD6Q9BR61 282 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 FAM213AQ9BRX8 229 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 ABCB6Q9NP58 842 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 SEMA4GQ9NTN9 838 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 GDAP2Q9NXN4 497 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 CCDC39Q9UFE4 941 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 SIX4Q9UIU6 781 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 CDV3Q9UKY7 258 aaKnown RBP14.12□□□□□ -0.15
MRPL55-228ENST00000476267 ZFHX4Q86UP3 3567 aa14.12□□□□□ -0.15
MRPL55-228ENST00000476267 PTPRDP23468 1912 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 TRDMT1O14717 391 aaKnown RBP14.11□□□□□ -0.15
MRPL55-228ENST00000476267 GABRDO14764 452 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 RUNX3Q13761 415 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 ZNF268Q14587 947 aaPredicted RBP14.11□□□□□ -0.15
MRPL55-228ENST00000476267 CSRP2Q16527 193 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 NFE2Q16621 373 aaPredicted RBP14.11□□□□□ -0.15
MRPL55-228ENST00000476267 INTS6LQ5JSJ4 861 aaKnown RBP14.11□□□□□ -0.15
MRPL55-228ENST00000476267 RRAGBQ5VZM2 374 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 TXNDC8Q6A555 127 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 TRIM68Q6AZZ1 485 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 PRR23BQ6ZRT6 265 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 SV2BQ7L1I2 683 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 MON1AQ86VX9 555 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 TMEM86AQ8N2M4 240 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 MAB21L3Q8N8X9 362 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 SPATA18Q8TC71 538 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 CBWD1Q9BRT8 395 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 PI4K2AQ9BTU6 479 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 KIF9Q9HAQ2 790 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 GKN1Q9NS71 199 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 TDP1Q9NUW8 608 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 DDX43Q9NXZ2 648 aaKnown RBP14.11□□□□□ -0.15
MRPL55-228ENST00000476267 RBAKQ9NYW8 714 aaPredicted RBP14.11□□□□□ -0.15
MRPL55-228ENST00000476267 TBC1D7Q9P0N9 293 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 RAB23Q9ULC3 237 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 AGAP1Q9UPQ3 857 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 EXOC7Q9UPT5 735 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 PTPRJQ12913 1337 aa14.11□□□□□ -0.15
MRPL55-228ENST00000476267 SLC30A4O14863 429 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 HCRTO43612 131 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 EXTL3O43909 919 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 GCNT3O95395 438 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 LDHAP00338 332 aaKnown RBP14.1□□□□□ -0.15
MRPL55-228ENST00000476267 CSH1P0DML2 217 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 CSH2P0DML3 217 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 SYT1P21579 422 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 ACAT1P24752 427 aaKnown RBP14.1□□□□□ -0.15
MRPL55-228ENST00000476267 CYP2F1P24903 491 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 AVPR1AP37288 418 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 TFAMQ00059 246 aaKnown RBP14.1□□□□□ -0.15
MRPL55-228ENST00000476267 TSPY1Q01534 308 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 CFAP221Q4G0U5 840 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 SDHAF4Q5VUM1 108 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 PRR23CQ6ZRP0 262 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 FAM160A2Q8N612 972 aaPredicted RBP14.1□□□□□ -0.15
MRPL55-228ENST00000476267 TOP6BLQ8N6T0 577 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 NETO1Q8TDF5 533 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 SLC22A12Q96S37 553 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 EBF3Q9H4W6 596 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 UPF2Q9HAU5 1272 aaKnown RBP14.1□□□□□ -0.15
MRPL55-228ENST00000476267 THG1LQ9NWX6 298 aaKnown RBP14.1□□□□□ -0.15
MRPL55-228ENST00000476267 ITGA11Q9UKX5 1188 aa14.1□□□□□ -0.15
MRPL55-228ENST00000476267 ZNF638Q14966 1978 aaKnown RBP14.09□□□□□ -0.15
MRPL55-228ENST00000476267 CCDC163A0A0D9SF12 145 aa14.09□□□□□ -0.15
MRPL55-228ENST00000476267 DCDC2BA2VCK2 349 aa14.09□□□□□ -0.15
MRPL55-228ENST00000476267 PRPF40AO75400 957 aaKnown RBP14.09□□□□□ -0.15
MRPL55-228ENST00000476267 ARSAP15289 507 aa14.09□□□□□ -0.15
MRPL55-228ENST00000476267 PDCP20941 246 aa14.09□□□□□ -0.15
MRPL55-228ENST00000476267 USP4Q13107 963 aa14.09□□□□□ -0.15
MRPL55-228ENST00000476267 ALCAMQ13740 583 aa14.09□□□□□ -0.15
MRPL55-228ENST00000476267 ZNF77Q15935 545 aa14.09□□□□□ -0.15
MRPL55-228ENST00000476267 TAF12Q16514 161 aa14.09□□□□□ -0.15
MRPL55-228ENST00000476267 DDR2Q16832 855 aa14.09□□□□□ -0.15
MRPL55-228ENST00000476267 SOWAHAQ2M3V2 549 aa14.09□□□□□ -0.15
MRPL55-228ENST00000476267 HEATR6Q6AI08 1181 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms