RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 TMEM130Q8N3G9 435 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 SH2D3CQ8N5H7 860 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 TMEM35BQ8NCS4 154 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 RSPH14Q9UHP6 348 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 THSD7BQ9C0I4 1608 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 SPOPO43791 374 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 CILPO75339 1184 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 CDH5P33151 784 aaPredicted RBP20.19■□□□□ 0.82
SYF2-204ENST00000476231 RAD23BP54727 409 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 XKR4Q5GH76 650 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 CROCCP2Q86T23 111 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 BCAS4Q8TDM0 211 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 PXYLP1Q8TE99 480 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 UBLCP1Q8WVY7 318 aaPredicted RBP20.19■□□□□ 0.82
SYF2-204ENST00000476231 MAIP1Q8WWC4 291 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 SLCO2A1Q92959 643 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 MAGOHBQ96A72 148 aaKnown RBP20.19■□□□□ 0.82
SYF2-204ENST00000476231 C11orf70Q9BRQ4 267 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 TRIM51Q9BSJ1 452 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 DPH5Q9H2P9 285 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 MRPL47Q9HD33 250 aaKnown RBP20.19■□□□□ 0.82
SYF2-204ENST00000476231 UBQLN1Q9UMX0 589 aaKnown RBP20.19■□□□□ 0.82
SYF2-204ENST00000476231 CEP83Q9Y592 693 aa20.19■□□□□ 0.82
SYF2-204ENST00000476231 TMEM110-MUSTN1A8MSY1 372 aa20.18■□□□□ 0.82
SYF2-204ENST00000476231 NUDT17P0C025 328 aa20.18■□□□□ 0.82
SYF2-204ENST00000476231 MMP8P22894 467 aa20.18■□□□□ 0.82
SYF2-204ENST00000476231 FLT3P36888 993 aa20.18■□□□□ 0.82
SYF2-204ENST00000476231 PTP4A2Q12974 167 aa20.18■□□□□ 0.82
SYF2-204ENST00000476231 LRRC52Q8N7C0 313 aa20.18■□□□□ 0.82
SYF2-204ENST00000476231 TFAP2BQ92481 460 aa20.18■□□□□ 0.82
SYF2-204ENST00000476231 CXCL16Q9H2A7 254 aa20.18■□□□□ 0.82
SYF2-204ENST00000476231 DDX20Q9UHI6 824 aaKnown RBP20.18■□□□□ 0.82
SYF2-204ENST00000476231 SCINQ9Y6U3 715 aa20.18■□□□□ 0.82
SYF2-204ENST00000476231 PDCD11Q14690 1871 aaKnown RBP20.18■□□□□ 0.82
SYF2-204ENST00000476231 TRIP11Q15643 1979 aa20.18■□□□□ 0.82
SYF2-204ENST00000476231 TLR3O15455 904 aaKnown RBP20.17■□□□□ 0.82
SYF2-204ENST00000476231 XPOTO43592 962 aaKnown RBP20.17■□□□□ 0.82
SYF2-204ENST00000476231 PYGMP11217 842 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 KCNE1P15382 129 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 AKAP5P24588 427 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 SSTR3P32745 418 aaPredicted RBP20.17■□□□□ 0.82
SYF2-204ENST00000476231 MDH1P40925 334 aaKnown RBP20.17■□□□□ 0.82
SYF2-204ENST00000476231 INCA1Q0VD86 236 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 SPATS2Q86XZ4 545 aaKnown RBP20.17■□□□□ 0.82
SYF2-204ENST00000476231 RAET1EQ8TD07 263 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 APOL6Q9BWW8 343 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 SENP6Q9GZR1 1112 aaPredicted RBP20.17■□□□□ 0.82
SYF2-204ENST00000476231 LRRC19Q9H756 370 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 ANAPC7Q9UJX3 599 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 IPPQ9Y573 584 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 MYO1CO00159 1063 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 MYO1FO00160 1098 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 EBAG9O00559 213 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 FSCN2O14926 492 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 CABYRO75952 493 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 CD4P01730 458 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 CALB1P05937 261 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 CD19P15391 556 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 MARCKSL1P49006 195 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 PLEKHA7Q6IQ23 1121 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 MMS22LQ6ZRQ5 1243 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 RNF180Q86T96 592 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 SLC4A11Q8NBS3 891 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 TMEM176AQ96HP8 235 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 EPN3Q9H201 632 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 LHX5Q9H2C1 402 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 TUBGCP4Q9UGJ1 667 aa20.17■□□□□ 0.82
SYF2-204ENST00000476231 BARX2Q9UMQ3 279 aaPredicted RBP20.17■□□□□ 0.82
SYF2-204ENST00000476231 MYCNP04198 464 aaPredicted RBP20.16■□□□□ 0.82
SYF2-204ENST00000476231 COILP38432 576 aaPredicted RBP20.16■□□□□ 0.82
SYF2-204ENST00000476231 PTPN11Q06124 597 aaPredicted RBP20.16■□□□□ 0.82
SYF2-204ENST00000476231 SIX1Q15475 284 aaPredicted RBP20.16■□□□□ 0.82
SYF2-204ENST00000476231 TWF2Q6IBS0 349 aaKnown RBP20.16■□□□□ 0.82
SYF2-204ENST00000476231 CCDC137Q6PK04 289 aaKnown RBP20.16■□□□□ 0.82
SYF2-204ENST00000476231 SMG8Q8ND04 991 aaKnown RBP20.16■□□□□ 0.82
SYF2-204ENST00000476231 C3orf20Q8ND61 904 aa20.16■□□□□ 0.82
SYF2-204ENST00000476231 WNT8BQ93098 351 aa20.16■□□□□ 0.82
SYF2-204ENST00000476231 BTBD6Q96KE9 485 aa20.16■□□□□ 0.82
SYF2-204ENST00000476231 CHST12Q9NRB3 414 aa20.16■□□□□ 0.82
SYF2-204ENST00000476231 SMIM28A0A1B0GU29 152 aa20.15■□□□□ 0.82
SYF2-204ENST00000476231 CHRNA1P02708 482 aa20.15■□□□□ 0.82
SYF2-204ENST00000476231 LSP1P33241 339 aa20.15■□□□□ 0.82
SYF2-204ENST00000476231 MGAT3Q09327 533 aa20.15■□□□□ 0.82
SYF2-204ENST00000476231 PDCLQ13371 301 aa20.15■□□□□ 0.82
SYF2-204ENST00000476231 ZDHHC24Q6UX98 284 aa20.15■□□□□ 0.82
SYF2-204ENST00000476231 C18orf25Q96B23 403 aaPredicted RBP20.15■□□□□ 0.82
SYF2-204ENST00000476231 ELOVL4Q9GZR5 314 aa20.15■□□□□ 0.82
SYF2-204ENST00000476231 PABPC3Q9H361 631 aaKnown RBP20.15■□□□□ 0.82
SYF2-204ENST00000476231 PARVAQ9NVD7 372 aa20.15■□□□□ 0.82
SYF2-204ENST00000476231 GRHL1Q9NZI5 618 aa20.15■□□□□ 0.82
SYF2-204ENST00000476231 MTRF1LQ9UGC7 380 aaKnown RBP20.15■□□□□ 0.82
SYF2-204ENST00000476231 ATXN2Q99700 1313 aaKnown RBP20.15■□□□□ 0.82
SYF2-204ENST00000476231 ATF7P17544 494 aaPredicted RBP20.15■□□□□ 0.82
SYF2-204ENST00000476231 MAN1A1P33908 653 aa20.15■□□□□ 0.82
SYF2-204ENST00000476231 CORO7P57737 925 aa20.15■□□□□ 0.82
SYF2-204ENST00000476231 PTGISQ16647 500 aa20.15■□□□□ 0.82
SYF2-204ENST00000476231 C2CD6Q53TS8 623 aa20.15■□□□□ 0.82
SYF2-204ENST00000476231 GLRA4Q5JXX5 417 aa20.15■□□□□ 0.82
SYF2-204ENST00000476231 SYDE1Q6ZW31 735 aaPredicted RBP20.15■□□□□ 0.82
SYF2-204ENST00000476231 B4GALNT4Q76KP1 1039 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms