RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 FRMD4BQ9Y2L6 1034 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 PCDHA5Q9Y5H7 936 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 CACNA1HO95180 2353 aa22.67■■□□□ 1.22
LIME1-204ENST00000476183 PHACTR2O75167 634 aa22.66■■□□□ 1.22
LIME1-204ENST00000476183 CYP2F1P24903 491 aa22.66■■□□□ 1.22
LIME1-204ENST00000476183 AP3M2P53677 418 aa22.66■■□□□ 1.22
LIME1-204ENST00000476183 PSMC1P62191 440 aaKnown RBP22.66■■□□□ 1.22
LIME1-204ENST00000476183 BIRC3Q13489 604 aa22.66■■□□□ 1.22
LIME1-204ENST00000476183 SDHAF4Q5VUM1 108 aa22.66■■□□□ 1.22
LIME1-204ENST00000476183 STKLD1Q8NE28 680 aa22.66■■□□□ 1.22
LIME1-204ENST00000476183 PRSS33Q8NF86 280 aa22.66■■□□□ 1.22
LIME1-204ENST00000476183 FLCNQ8NFG4 579 aa22.66■■□□□ 1.22
LIME1-204ENST00000476183 TMC2Q8TDI7 906 aa22.66■■□□□ 1.22
LIME1-204ENST00000476183 ELSPBP1Q96BH3 223 aa22.66■■□□□ 1.22
LIME1-204ENST00000476183 SYT15Q9BQS2 421 aa22.66■■□□□ 1.22
LIME1-204ENST00000476183 IL21Q9HBE4 155 aa22.66■■□□□ 1.22
LIME1-204ENST00000476183 CRTAC1Q9NQ79 661 aa22.66■■□□□ 1.22
LIME1-204ENST00000476183 NCANO14594 1321 aa22.65■■□□□ 1.22
LIME1-204ENST00000476183 TACC1O75410 805 aa22.65■■□□□ 1.22
LIME1-204ENST00000476183 PDGFRBP09619 1106 aa22.65■■□□□ 1.22
LIME1-204ENST00000476183 GABRR2P28476 465 aa22.65■■□□□ 1.22
LIME1-204ENST00000476183 ATICP31939 592 aa22.65■■□□□ 1.22
LIME1-204ENST00000476183 NCOA4Q13772 614 aa22.65■■□□□ 1.22
LIME1-204ENST00000476183 VEPH1Q14D04 833 aa22.65■■□□□ 1.22
LIME1-204ENST00000476183 ASTLQ6HA08 431 aaPredicted RBP22.65■■□□□ 1.22
LIME1-204ENST00000476183 ZSCAN18Q8TBC5 510 aaPredicted RBP22.65■■□□□ 1.22
LIME1-204ENST00000476183 SMARCD2Q92925 531 aa22.65■■□□□ 1.22
LIME1-204ENST00000476183 SYAP1Q96A49 352 aaPredicted RBP22.65■■□□□ 1.22
LIME1-204ENST00000476183 GSDMAQ96QA5 445 aa22.65■■□□□ 1.22
LIME1-204ENST00000476183 MKNK1Q9BUB5 465 aa22.65■■□□□ 1.22
LIME1-204ENST00000476183 KCNH6Q9H252 994 aa22.65■■□□□ 1.22
LIME1-204ENST00000476183 VRTNQ9H8Y1 702 aa22.65■■□□□ 1.22
LIME1-204ENST00000476183 ABCB6Q9NP58 842 aa22.65■■□□□ 1.22
LIME1-204ENST00000476183 RMND1Q9NWS8 449 aa22.65■■□□□ 1.22
LIME1-204ENST00000476183 NXF1Q9UBU9 619 aaKnown RBP22.65■■□□□ 1.22
LIME1-204ENST00000476183 CDH9Q9ULB4 789 aa22.65■■□□□ 1.22
LIME1-204ENST00000476183 MAPK13O15264 365 aa22.64■■□□□ 1.21
LIME1-204ENST00000476183 PI15O43692 258 aa22.64■■□□□ 1.21
LIME1-204ENST00000476183 HMGA1P17096 107 aaKnown RBP22.64■■□□□ 1.21
LIME1-204ENST00000476183 VIPR2P41587 438 aa22.64■■□□□ 1.21
LIME1-204ENST00000476183 PRCPP42785 496 aa22.64■■□□□ 1.21
LIME1-204ENST00000476183 TNNC1P63316 161 aa22.64■■□□□ 1.21
LIME1-204ENST00000476183 ADAM9Q13443 819 aa22.64■■□□□ 1.21
LIME1-204ENST00000476183 DDR2Q16832 855 aa22.64■■□□□ 1.21
LIME1-204ENST00000476183 ZACNQ401N2 412 aa22.64■■□□□ 1.21
LIME1-204ENST00000476183 ZNF658Q5TYW1 1059 aaPredicted RBP22.64■■□□□ 1.21
LIME1-204ENST00000476183 ATXN3LQ9H3M9 355 aa22.64■■□□□ 1.21
LIME1-204ENST00000476183 SLITRK6Q9H5Y7 841 aa22.64■■□□□ 1.21
LIME1-204ENST00000476183 ZFP14Q9HCL3 533 aa22.64■■□□□ 1.21
LIME1-204ENST00000476183 ARHGEF3Q9NR81 526 aa22.64■■□□□ 1.21
LIME1-204ENST00000476183 COL4A3Q01955 1670 aa22.64■■□□□ 1.21
LIME1-204ENST00000476183 PTPRDP23468 1912 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 SMC2O95347 1197 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 FAM163BP0C2L3 166 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 GNL1P36915 607 aaPredicted RBP22.63■■□□□ 1.21
LIME1-204ENST00000476183 CLCN5P51795 746 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 VAMP7P51809 220 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 GRM2Q14416 872 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 ZNF699Q32M78 642 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 CFAP221Q4G0U5 840 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 SV2AQ7L0J3 742 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 SPATA2LQ8IUW3 424 aaPredicted RBP22.63■■□□□ 1.21
LIME1-204ENST00000476183 FAM186BQ8IYM0 893 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 SMARCE1Q969G3 411 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 MYLPFQ96A32 169 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 RSPRY1Q96DX4 576 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 EEF2KMTQ96G04 330 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 GPR88Q9GZN0 384 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 SNX25Q9H3E2 840 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 SMYD3Q9H7B4 428 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 TRPV4Q9HBA0 871 aa22.63■■□□□ 1.21
LIME1-204ENST00000476183 IKBKBO14920 756 aa22.62■■□□□ 1.21
LIME1-204ENST00000476183 TRIM49P0CI25 452 aa22.62■■□□□ 1.21
LIME1-204ENST00000476183 TRIM49CP0CI26 452 aa22.62■■□□□ 1.21
LIME1-204ENST00000476183 RPL13P26373 211 aaKnown RBP22.62■■□□□ 1.21
LIME1-204ENST00000476183 PLA2G5P39877 138 aa22.62■■□□□ 1.21
LIME1-204ENST00000476183 CDH8P55286 799 aa22.62■■□□□ 1.21
LIME1-204ENST00000476183 CYP4F8P98187 520 aa22.62■■□□□ 1.21
LIME1-204ENST00000476183 TAF12Q16514 161 aa22.62■■□□□ 1.21
LIME1-204ENST00000476183 EDRF1Q3B7T1 1238 aa22.62■■□□□ 1.21
LIME1-204ENST00000476183 COBLL1Q53SF7 1204 aa22.62■■□□□ 1.21
LIME1-204ENST00000476183 VITQ6UXI7 678 aa22.62■■□□□ 1.21
LIME1-204ENST00000476183 TMEM150AQ86TG1 271 aa22.62■■□□□ 1.21
LIME1-204ENST00000476183 GPIHBP1Q8IV16 184 aa22.62■■□□□ 1.21
LIME1-204ENST00000476183 ELOA2Q8IYF1 753 aaPredicted RBP22.62■■□□□ 1.21
LIME1-204ENST00000476183 OR6B3Q8NGW1 331 aa22.62■■□□□ 1.21
LIME1-204ENST00000476183 FUBP3Q96I24 572 aaKnown RBP eCLIP22.62■■□□□ 1.21
LIME1-204ENST00000476183 DPEP3Q9H4B8 488 aa22.62■■□□□ 1.21
LIME1-204ENST00000476183 TBC1D17Q9HA65 648 aa22.62■■□□□ 1.21
LIME1-204ENST00000476183 DENND4CQ5VZ89 1909 aa22.61■■□□□ 1.21
LIME1-204ENST00000476183 FGF19O95750 216 aa22.61■■□□□ 1.21
LIME1-204ENST00000476183 AOC1P19801 751 aa22.61■■□□□ 1.21
LIME1-204ENST00000476183 PSMC2P35998 433 aaKnown RBP22.61■■□□□ 1.21
LIME1-204ENST00000476183 RAP1GAPP47736 663 aa22.61■■□□□ 1.21
LIME1-204ENST00000476183 PPP3CAQ08209 521 aa22.61■■□□□ 1.21
LIME1-204ENST00000476183 TCF15Q12870 199 aa22.61■■□□□ 1.21
LIME1-204ENST00000476183 ZNF667Q5HYK9 610 aa22.61■■□□□ 1.21
LIME1-204ENST00000476183 GPR158Q5T848 1215 aa22.61■■□□□ 1.21
LIME1-204ENST00000476183 INTS8Q75QN2 995 aaKnown RBP22.61■■□□□ 1.21
LIME1-204ENST00000476183 MYCBPAPQ8TBZ2 947 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms